-
1
-
-
85158019877
-
Lambda integrase and the lambda Int family
-
N. L. Craig, R. Craigie, M. Gellert, and A. M. Lambowitz (ed.), ASM Press, Washington, DC
-
Azaro, M. A., and A. Landy. 2002. Lambda integrase and the lambda Int family, p. 119-148. In N. L. Craig, R. Craigie, M. Gellert, and A. M. Lambowitz (ed.), Mobile DNA II. ASM Press, Washington, DC.
-
(2002)
Mobile DNA II
, pp. 119-148
-
-
Azaro, M.A.1
Landy, A.2
-
2
-
-
0030950350
-
The isomeric preference of Holliday junctions influences resolution bias by lambda integrase
-
Azaro, M. A., and A. Landy. 1997. The isomeric preference of Holliday junctions influences resolution bias by lambda integrase. EMBO J. 16:3744-3755.
-
(1997)
EMBO J.
, vol.16
, pp. 3744-3755
-
-
Azaro, M.A.1
Landy, A.2
-
3
-
-
0023029428
-
Mutational analysis of integrase arm-type binding sites of bacteriophage lambda. Integration and excision involve distinct interactions of integrase with armtype sites
-
Bauer, C. E., S. D. Hesse, R. I. Gumport, and J. F. Gardner. 1986. Mutational analysis of integrase arm-type binding sites of bacteriophage lambda. Integration and excision involve distinct interactions of integrase with armtype sites. J. Mol. Biol. 192:513-527.
-
(1986)
J. Mol. Biol.
, vol.192
, pp. 513-527
-
-
Bauer, C.E.1
Hesse, S.D.2
Gumport, R.I.3
Gardner, J.F.4
-
4
-
-
0020651375
-
Role of the Xis protein of bacteriophage lambda in a specific reactive complex at the attR prophage attachment site
-
Better, M., S. Wickner, J. Auerbach, and H. Echols. 1983. Role of the Xis protein of bacteriophage lambda in a specific reactive complex at the attR prophage attachment site. Cell 32:161-168.
-
(1983)
Cell
, vol.32
, pp. 161-168
-
-
Better, M.1
Wickner, S.2
Auerbach, J.3
Echols, H.4
-
5
-
-
21344466779
-
A structural basis for allosteric control of DNA recombination by lambda integrase
-
DOI 10.1038/nature03657
-
Biswas, T., H. Aihara, M. Radman-Livaja, D. Filman, A. Landy, and T. Ellenberger. 2005. A structural basis for allosteric control of DNA recombination by lambda integrase. Nature 435:1059-1066. (Pubitemid 40910508)
-
(2005)
Nature
, vol.435
, Issue.7045
, pp. 1059-1066
-
-
Biswas, T.1
Aihara, H.2
Radman-Livaja, M.3
Filman, D.4
Landy, A.5
Ellenberger, T.6
-
6
-
-
33847414080
-
Spermidine biases the resolution of Holliday junctions by phage lambda integrase
-
Boldt, J. L., K. V. Kepple, G. D. Cassell, and A. M. Segall. 2007. Spermidine biases the resolution of Holliday junctions by phage lambda integrase. Nucleic Acids Res. 35:716-727.
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. 716-727
-
-
Boldt, J.L.1
Kepple, K.V.2
Cassell, G.D.3
Segall, A.M.4
-
7
-
-
0021676510
-
Determinants of directionality in lambda site-specific recombination
-
Bushman, W., S. Yin, L. L. Thio, and A. Landy. 1984. Determinants of directionality in lambda site-specific recombination. Cell 39:699-706. (Pubitemid 15198608)
-
(1984)
Cell
, vol.39
, Issue.3 II
, pp. 699-706
-
-
Bushman, W.1
Yin, S.2
Thio, L.L.3
Landy, A.4
-
8
-
-
0034892598
-
Identification of genes required for excision of CTnDOT, a Bacteroides conjugative transposon
-
Cheng, Q., Y. Sutanto, N. B. Shoemaker, J. F. Gardner, and A. A. Salyers. 2001. Identification of genes required for excision of CTnDOT, a Bacteroides conjugative transposon. Mol. Microbiol. 41:625-632.
-
(2001)
Mol. Microbiol.
, vol.41
, pp. 625-632
-
-
Cheng, Q.1
Sutanto, Y.2
Shoemaker, N.B.3
Gardner, J.F.4
Salyers, A.A.5
-
9
-
-
0036719290
-
Development of an in vitro integration assay for the Bacteroides conjugative transposon CTnDOT
-
Cheng, Q., N. Wesslund, N. B. Shoemaker, A. A. Salyers, and J. F. Gardner. 2002. Development of an in vitro integration assay for the Bacteroides conjugative transposon CTnDOT. J. Bacteriol. 184:4829-4837.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 4829-4837
-
-
Cheng, Q.1
Wesslund, N.2
Shoemaker, N.B.3
Salyers, A.A.4
Gardner, J.F.5
-
10
-
-
0036724215
-
Interactions between integrase and excisionase in the phage lambda excisive nucleoprotein complex
-
Cho, E. H., R. I. Gumport, and J. F. Gardner. 2002. Interactions between integrase and excisionase in the phage lambda excisive nucleoprotein complex. J. Bacteriol. 184:5200-5203.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 5200-5203
-
-
Cho, E.H.1
Gumport, R.I.2
Gardner, J.F.3
-
11
-
-
34147157115
-
IntDOT interactions with core- And arm-type sites of the conjugative transposon CTnDOT
-
DiChiara, J. M., A. N. Mattis, and J. F. Gardner. 2007. IntDOT interactions with core- and arm-type sites of the conjugative transposon CTnDOT. J. Bacteriol. 189:2692-2701.
-
(2007)
J. Bacteriol.
, vol.189
, pp. 2692-2701
-
-
DiChiara, J.M.1
Mattis, A.N.2
Gardner, J.F.3
-
12
-
-
18444382333
-
In vitro analysis of sequence requirements for the excision reaction of the Bacteroides conjugative transposon, CTnDOT
-
DiChiara, J. M., A. A. Salyers, and J. F. Gardner. 2005. In vitro analysis of sequence requirements for the excision reaction of the Bacteroides conjugative transposon, CTnDOT. Mol. Microbiol. 56:1035-1048.
-
(2005)
Mol. Microbiol.
, vol.56
, pp. 1035-1048
-
-
DiChiara, J.M.1
Salyers, A.A.2
Gardner, J.F.3
-
13
-
-
0035477790
-
Protein and DNA requirements of the bacteriophage HP1 recombination system: A model for intasome formation
-
Esposito, D., J. S. Thrower, and J. J. Scocca. 2001. Protein and DNA requirements of the bacteriophage HP1 recombination system: a model for intasome formation. Nucleic Acids Res. 29:3955-3964.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 3955-3964
-
-
Esposito, D.1
Thrower, J.S.2
Scocca, J.J.3
-
14
-
-
45549105397
-
A biotin interference assay highlights two different asymmetric interaction profiles for lambda integrase arm-type binding sites in integrative versus excisive recombination
-
Hazelbaker, D., M. A. Azaro, and A. Landy. 2008. A biotin interference assay highlights two different asymmetric interaction profiles for lambda integrase arm-type binding sites in integrative versus excisive recombination. J. Biol. Chem. 283:12402-12414.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 12402-12414
-
-
Hazelbaker, D.1
Azaro, M.A.2
Landy, A.3
-
15
-
-
0026537332
-
Lambda Int protein bridges between higher order complexes at two distant chromosomal loci attL and attR
-
Kim, S., and A. Landy. 1992. Lambda Int protein bridges between higher order complexes at two distant chromosomal loci attL and attR. Science 256:198-203.
-
(1992)
Science
, vol.256
, pp. 198-203
-
-
Kim, S.1
Landy, A.2
-
16
-
-
0025223119
-
Mapping of a higher order protein-DNA complex: Two kinds of long-range interactions in lambda attL
-
Kim, S., L. Moitoso de Vargas, S. E. Nunes-Duby, and A. Landy. 1990. Mapping of a higher order protein-DNA complex: two kinds of long-range interactions in lambda attL. Cell 63:773-781. (Pubitemid 120035050)
-
(1990)
Cell
, vol.63
, Issue.4
, pp. 773-781
-
-
Kim, S.1
De Vargas, L.M.2
Nunes-Duby, S.E.3
Landy, A.4
-
17
-
-
77950351936
-
Homology-dependent interactions determine the order of strand exchange by IntDOT recombinase
-
Laprise, J., S. Yoneji, and J. F. Gardner. 2010. Homology-dependent interactions determine the order of strand exchange by IntDOT recombinase. Nucleic Acids Res. 38:958-969.
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 958-969
-
-
Laprise, J.1
Yoneji, S.2
Gardner, J.F.3
-
18
-
-
0025213120
-
Genetic analysis of bacteriophage lambda integrase interactions with arm-type attachment site sequences
-
Lee, E. C., R. I. Gumport, and J. F. Gardner. 1990. Genetic analysis of bacteriophage lambda integrase interactions with arm-type attachment site sequences. J. Bacteriol. 172:1529-1538.
-
(1990)
J. Bacteriol.
, vol.172
, pp. 1529-1538
-
-
Lee, E.C.1
Gumport, R.I.2
Gardner, J.F.3
-
19
-
-
0028353171
-
Conjugative transposition: Tn916 integrase contains two independent DNA binding domains that recognize different DNA sequences
-
Lu, F., and G. Churchward. 1994. Conjugative transposition: Tn916 integrase contains two independent DNA binding domains that recognize different DNA sequences. EMBO J. 13:1541-1548. (Pubitemid 24114704)
-
(1994)
EMBO Journal
, vol.13
, Issue.7
, pp. 1541-1548
-
-
Lu, F.1
Churchward, G.2
-
20
-
-
0031056717
-
Mutational analysis of protein binding sites involved in formation of the bacteriophage lambda attL complex
-
MacWilliams, M. P., R. I. Gumport, and J. F. Gardner. 1997. Mutational analysis of protein binding sites involved in formation of the bacteriophage lambda attL complex. J. Bacteriol. 179:1059-1067.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 1059-1067
-
-
MacWilliams, M.P.1
Gumport, R.I.2
Gardner, J.F.3
-
21
-
-
33745273841
-
Characterization of a conjugative transposon integrase, IntDOT
-
Malanowska, K., A. A. Salyers, and J. F. Gardner. 2006. Characterization of a conjugative transposon integrase, IntDOT. Mol. Microbiol. 60:1228-1240.
-
(2006)
Mol. Microbiol.
, vol.60
, pp. 1228-1240
-
-
Malanowska, K.1
Salyers, A.A.2
Gardner, J.F.3
-
22
-
-
0024340762
-
DNA looping generated by DNA bending protein IHF and the two domains of lambda integrase
-
Moitoso de Vargas, L., S. Kim, and A. Landy. 1989. DNA looping generated by DNA bending protein IHF and the two domains of lambda integrase. Science 244:1457-1461.
-
(1989)
Science
, vol.244
, pp. 1457-1461
-
-
Moitoso de Vargas, L.1
Kim, S.2
Landy, A.3
-
23
-
-
0026008164
-
A switch in the formation of alternative DNA loops modulates lambda site-specific recombination
-
Moitoso de Vargas, L., and A. Landy. 1991. A switch in the formation of alternative DNA loops modulates lambda site-specific recombination. Proc. Natl. Acad. Sci. U. S. A. 88:588-592.
-
(1991)
Proc. Natl. Acad. Sci. U. S. A.
, vol.88
, pp. 588-592
-
-
Moitoso De Vargas, L.1
Landy, A.2
-
24
-
-
0024295418
-
Autonomous DNA binding domains of lambda integrase recognize two different sequence families
-
Moitoso de Vargas, L., C. A. Pargellis, N. M. Hasan, E. W. Bushman, and A. Landy. 1988. Autonomous DNA binding domains of lambda integrase recognize two different sequence families. Cell 54:923-929.
-
(1988)
Cell
, vol.54
, pp. 923-929
-
-
Moitoso de Vargas, L.1
Pargellis, C.A.2
Hasan, N.M.3
Bushman, E.W.4
Landy, A.5
-
25
-
-
0020971305
-
Purification and properties of the bacteriophage lambda Int protein
-
Nash, H. A. 1983. Purification and properties of the bacteriophage lambda Int protein. Methods Enzymol. 100:210-216. (Pubitemid 14001235)
-
(1983)
Methods in Enzymology
, vol.100
, pp. 210-216
-
-
Nash, H.A.1
-
26
-
-
0026700238
-
Characterization of the bacteriophage lambda excisionase (Xis) protein: The C-terminus is required for Xis-integrase cooperativity but not for DNA binding
-
Numrych, T. E., R. I. Gumport, and J. F. Gardner. 1992. Characterization of the bacteriophage lambda excisionase (Xis) protein: the C-terminus is required for Xis-integrase cooperativity but not for DNA binding. EMBO J. 11:3797-3806.
-
(1992)
EMBO J.
, vol.11
, pp. 3797-3806
-
-
Numrych, T.E.1
Gumport, R.I.2
Gardner, J.F.3
-
27
-
-
0025372188
-
A comparison of the effects of single-base and triple-base changes in the integrase arm-type binding sites on the site-specific recombination of bacteriophage lambda
-
Numrych, T. E., R. I. Gumport, and J. F. Gardner. 1990. A comparison of the effects of single-base and triple-base changes in the integrase arm-type binding sites on the site-specific recombination of bacteriophage lambda. Nucleic Acids Res. 18:3953-3959.
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 3953-3959
-
-
Numrych, T.E.1
Gumport, R.I.2
Gardner, J.F.3
-
28
-
-
0031566957
-
Characterization of the mycobacteriophage L5 attachment site, attP
-
Pena, C. E., M. H. Lee, M. L. Pedulla, and G. F. Hatfull. 1997. Characterization of the mycobacteriophage L5 attachment site, attP. J. Mol. Biol. 266:76-92.
-
(1997)
J. Mol. Biol.
, vol.266
, pp. 76-92
-
-
Pena, C.E.1
Lee, M.H.2
Pedulla, M.L.3
Hatfull, G.F.4
-
29
-
-
32344451042
-
DNA arms do the legwork to ensure the directionality of lambda site-specific recombination
-
Radman-Livaja, M., T. Biswas, T. Ellenberger, A. Landy, and H. Aihara. 2006. DNA arms do the legwork to ensure the directionality of lambda site-specific recombination. Curr. Opin. Struct. Biol. 16:42-50.
-
(2006)
Curr. Opin. Struct. Biol.
, vol.16
, pp. 42-50
-
-
Radman-Livaja, M.1
Biswas, T.2
Ellenberger, T.3
Landy, A.4
Aihara, H.5
-
30
-
-
0344806949
-
Arm sequences contribute to the architecture and catalytic function of a lambda integrase-Holliday junction complex
-
DOI 10.1016/S1097-2765(03)00111-4
-
Radman-Livaja, M., C. Shaw, M. Azaro, T. Biswas, T. Ellenberger, and A. Landy. 2003. Arm sequences contribute to the architecture and catalytic function of a lambda integrase-Holliday junction complex. Mol. Cell 11:783-794. (Pubitemid 36385130)
-
(2003)
Molecular Cell
, vol.11
, Issue.3
, pp. 783-794
-
-
Radman-Livaja, M.1
Shaw, C.2
Azaro, M.3
Biswas, T.4
Ellenberger, T.5
Landy, A.6
-
31
-
-
0020361203
-
Bacteriophage lambda Int protein recognizes two classes of sequence in the phage att site: Characterization of arm-type sites
-
Ross, W., and A. Landy. 1982. Bacteriophage lambda Int protein recognizes two classes of sequence in the phage att site: characterization of arm-type sites. Proc. Natl. Acad. Sci. U. S. A. 79:7724-7728.
-
(1982)
Proc. Natl. Acad. Sci. U. S. A.
, vol.79
, pp. 7724-7728
-
-
Ross, W.1
Landy, A.2
-
32
-
-
0020537076
-
Patterns of lambda Int recognition in the regions of strand exchange
-
Ross, W., and A. Landy. 1983. Patterns of lambda Int recognition in the regions of strand exchange. Cell 33:261-272. (Pubitemid 13096455)
-
(1983)
Cell
, vol.33
, Issue.1
, pp. 261-272
-
-
Ross, W.1
Landy, A.2
-
33
-
-
0018691250
-
Interaction of Int protein with specific sites on lambda att DNA
-
Ross, W., A. Landy, Y. Kikuchi, and H. Nash. 1979. Interaction of Int protein with specific sites on lambda att DNA. Cell 18:297-307. (Pubitemid 10248355)
-
(1979)
Cell
, vol.18
, Issue.2
, pp. 297-307
-
-
Ross, W.1
Landy, A.2
Kikuchi, Y.3
Nash, H.4
-
34
-
-
0028889420
-
Conjugative transposons: An unusual and diverse set of integrated gene transfer elements
-
Salyers, A. A., N. B. Shoemaker, A. M. Stevens, and L. Y. Li. 1995. Conjugative transposons: an unusual and diverse set of integrated gene transfer elements. Microbiol. Rev. 59:579-590.
-
(1995)
Microbiol. Rev.
, vol.59
, pp. 579-590
-
-
Salyers, A.A.1
Shoemaker, N.B.2
Stevens, A.M.3
Li, L.Y.4
-
35
-
-
0035282917
-
The small DNA binding domain of lambda integrase is a context-sensitive modulator of recombinase functions
-
DOI 10.1093/emboj/20.5.1203
-
Sarkar, D., M. Radman-Livaja, and A. Landy. 2001. The small DNA binding domain of lambda integrase is a context-sensitive modulator of recombinase functions. EMBO J. 20:1203-1212. (Pubitemid 32186810)
-
(2001)
EMBO Journal
, vol.20
, Issue.5
, pp. 1203-1212
-
-
Sarkar, D.1
Radman-Livaja, M.2
Landy, A.3
-
36
-
-
0035142427
-
Evidence for extensive resistance gene transfer among Bacteroides spp. and among Bacteroides and other genera in the human colon
-
Shoemaker, N. B., H. Vlamakis, K. Hayes, and A. A. Salyers. 2001. Evidence for extensive resistance gene transfer among Bacteroides spp. and among Bacteroides and other genera in the human colon. Appl. Environ. Microbiol. 67:561-568.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 561-568
-
-
Shoemaker, N.B.1
Vlamakis, H.2
Hayes, K.3
Salyers, A.A.4
-
37
-
-
0027941644
-
Structure of the P22 att site. Conservation and divergence in the lambda motif of recombinogenic complexes
-
Smith-Mungo, L., I. T. Chan, and A. Landy. 1994. Structure of the P22 att site. Conservation and divergence in the lambda motif of recombinogenic complexes. J. Biol. Chem. 269:20798-20805.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 20798-20805
-
-
Smith-Mungo, L.1
Chan, I.T.2
Landy, A.3
-
38
-
-
4344624314
-
Factors required in vitro for excision of the Bacteroides conjugative transposon, CTnDOT
-
Sutanto, Y., J. M. DiChiara, N. B. Shoemaker, J. F. Gardner, and A. A. Salyers. 2004. Factors required in vitro for excision of the Bacteroides conjugative transposon, CTnDOT. Plasmid 52:119-130.
-
(2004)
Plasmid
, vol.52
, pp. 119-130
-
-
Sutanto, Y.1
DiChiara, J.M.2
Shoemaker, N.B.3
Gardner, J.F.4
Salyers, A.A.5
-
39
-
-
0141818942
-
The molecular basis of co-operative DNA binding between lambda integrase and excisionase
-
Swalla, B. M., E. H. Cho, R. I. Gumport, and J. F. Gardner. 2003. The molecular basis of co-operative DNA binding between lambda integrase and excisionase. Mol. Microbiol. 50:89-99.
-
(2003)
Mol. Microbiol.
, vol.50
, pp. 89-99
-
-
Swalla, B.M.1
Cho, E.H.2
Gumport, R.I.3
Gardner, J.F.4
-
40
-
-
0023644993
-
Protein-protein interactions in a higher-order structure direct lambda site-specific recombination
-
Thompson, J. F., L. M. Moitoso de Vargas, S. E. Skinner, and A. Landy. 1987. Protein-protein interactions in a higher-order structure direct lambda site-specific recombination. J. Mol. Biol. 195:481-493.
-
(1987)
J. Mol. Biol.
, vol.195
, pp. 481-493
-
-
Thompson, J.F.1
Moitoso De Vargas, L.M.2
Skinner, S.E.3
Landy, A.4
-
41
-
-
24044498937
-
Lambda integrase: Armed for recombination
-
Van Duyne, G. D. 2005. Lambda integrase: armed for recombination. Curr. Biol. 15:R658-R660.
-
(2005)
Curr. Biol.
, vol.15
-
-
Van Duyne, G.D.1
-
42
-
-
0002627116
-
-
N. L. Craig, R. Craigie, M. Gellert, and A. M. Lambowitz (ed.), Mobile DNA II. ASM Press, Washington, DC
-
Van Duyne, G. D. 2002. A structural view of tyrosine recombinase site-specific recombination, p. 93-117. In N. L. Craig, R. Craigie, M. Gellert, and A. M. Lambowitz (ed.), Mobile DNA II. ASM Press, Washington, DC.
-
(2002)
A Structural View of Tyrosine Recombinase Site-specific Recombination
, pp. 93-117
-
-
Van Duyne, G.D.1
|