메뉴 건너뛰기




Volumn 266, Issue 1, 1997, Pages 76-92

Characterization of the Mycobacteriophage L5 attachment site, attP

Author keywords

Attachment site; Bacteriophage; Integration; Mycobacteria; Site specific recombination

Indexed keywords

INTEGRASE;

EID: 0031566957     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.1996.0774     Document Type: Article
Times cited : (51)

References (43)
  • 2
    • 0030035256 scopus 로고    scopus 로고
    • Characterization of a Mycobacterium smegmatis gene that confers resistance to phages L5 and D29 when overexpressed
    • Barsom E. K., Hatfull G. F. Characterization of a Mycobacterium smegmatis gene that confers resistance to phages L5 and D29 when overexpressed. Mol. Microbiol. 21:1996;159-170.
    • (1996) Mol. Microbiol. , vol.21 , pp. 159-170
    • Barsom, E.K.1    Hatfull, G.F.2
  • 3
    • 0023029428 scopus 로고
    • Mutational analysis of the integrase arm-type binding sites of bacteriophage lambda
    • Bauer C. E., Hesse S. D., Gumport R. I., Gardner J. F. Mutational analysis of the integrase arm-type binding sites of bacteriophage lambda. J. Mol. Biol. 192:1986;513-527.
    • (1986) J. Mol. Biol. , vol.192 , pp. 513-527
    • Bauer, C.E.1    Hesse, S.D.2    Gumport, R.I.3    Gardner, J.F.4
  • 4
    • 0025336966 scopus 로고
    • TRNA genes in mycobacteria: Organization and molecular cloning
    • Bhargava S., Tyagi A. K., Tyagi J. S. tRNA genes in mycobacteria: organization and molecular cloning. J. Bacteriol. 172:1990;2930-2934.
    • (1990) J. Bacteriol. , vol.172 , pp. 2930-2934
    • Bhargava, S.1    Tyagi, A.K.2    Tyagi, J.S.3
  • 6
    • 0021710080 scopus 로고
    • E. coli integration host factor binds to specific sites in DNA
    • Craig N. L., Nash H. A. E. coli integration host factor binds to specific sites in DNA. Cell. 39:1984;707-716.
    • (1984) Cell , vol.39 , pp. 707-716
    • Craig, N.L.1    Nash, H.A.2
  • 7
    • 0028291730 scopus 로고
    • Global tuberculosis incidence and mortality during 1990-2000
    • Dolin P. J., Raviglione M. C., Kochi A. Global tuberculosis incidence and mortality during 1990-2000. Bull. World Health Organ. 72:1994;213-220.
    • (1994) Bull. World Health Organ. , vol.72 , pp. 213-220
    • Dolin, P.J.1    Raviglione, M.C.2    Kochi, A.3
  • 8
    • 0022553616 scopus 로고
    • Role of Escherichia coli IHF protein in lambda site-specific recombination
    • Gardner J. F., Nash H. A. Role of Escherichia coli IHF protein in lambda site-specific recombination. J. Mol. Biol. 191:1986;181-189.
    • (1986) J. Mol. Biol. , vol.191 , pp. 181-189
    • Gardner, J.F.1    Nash, H.A.2
  • 9
    • 0024424261 scopus 로고
    • Functional replacement of a protein-induced bend in a DNA recombination site
    • Goodman S. D., Nash H. A. Functional replacement of a protein-induced bend in a DNA recombination site. Nature. 341:1989;251-254.
    • (1989) Nature , vol.341 , pp. 251-254
    • Goodman, S.D.1    Nash, H.A.2
  • 10
    • 0027049067 scopus 로고
    • Deformation of DNA during site-specific recombination of bacteriophage lambda: Replacement of IHF protein by HU protein or sequence-directed bends
    • Goodman S. D., Nicholson S. C., Nash H. A. Deformation of DNA during site-specific recombination of bacteriophage lambda: replacement of IHF protein by HU protein or sequence-directed bends. Proc. Natl Acad. Sci. USA. 89:1992;11910-11914.
    • (1992) Proc. Natl Acad. Sci. USA , vol.89 , pp. 11910-11914
    • Goodman, S.D.1    Nicholson, S.C.2    Nash, H.A.3
  • 11
    • 0028070923 scopus 로고
    • Binding sites for bacteriophage HP1 integrase on its DNA substrates
    • Hakimi J. M., Scocca J. J. Binding sites for bacteriophage HP1 integrase on its DNA substrates. J. Biol. Chem. 269:1994;21340-21345.
    • (1994) J. Biol. Chem. , vol.269 , pp. 21340-21345
    • Hakimi, J.M.1    Scocca, J.J.2
  • 12
    • 0000094278 scopus 로고
    • Mycobacteriophage L5: A toolbox for tuberculosis
    • Hatfull G. F. Mycobacteriophage L5: a toolbox for tuberculosis. ASM News. 60:1994;255-260.
    • (1994) ASM News , vol.60 , pp. 255-260
    • Hatfull, G.F.1
  • 14
    • 0027456546 scopus 로고
    • DNA sequence, structure and gene expression of mycobacteriophage L5: A phage system for mycobacterial genetics
    • Hatfull G. F., Sarkis G. J. DNA sequence, structure and gene expression of mycobacteriophage L5: a phage system for mycobacterial genetics. Mol. Microbiol. 7:1993;395-405.
    • (1993) Mol. Microbiol. , vol.7 , pp. 395-405
    • Hatfull, G.F.1    Sarkis, G.J.2
  • 16
    • 0018939726 scopus 로고
    • The λatt site: Functional limits and interaction with Int protein
    • Hsu P.-L., Ross W., Landy A. The λatt site: functional limits and interaction with Int protein. Nature. 285:1980;85-91.
    • (1980) Nature , vol.285 , pp. 85-91
    • Hsu, P.-L.1    Ross, W.2    Landy, A.3
  • 17
    • 0026537332 scopus 로고
    • Lambda Int protein bridges between higher order complexes at two distant chromosomal loci attL andattR
    • Kim S., Landy A. Lambda Int protein bridges between higher order complexes at two distant chromosomal loci attL andattR. Science. 256:1992;198-203.
    • (1992) Science , vol.256 , pp. 198-203
    • Kim, S.1    Landy, A.2
  • 18
    • 0025223119 scopus 로고
    • Mapping of a higher order protein-DNA complex: Two kinds of long-range interactions in λattL
    • Kim S., Moitoso de Vargas L., Nunes-Düby S., Landy A. Mapping of a higher order protein-DNA complex: two kinds of long-range interactions in λattL. Cell. 63:1990;773-781.
    • (1990) Cell , vol.63 , pp. 773-781
    • Kim, S.1    Moitoso De Vargas, L.2    Nunes-Düby, S.3    Landy, A.4
  • 19
    • 0024386798 scopus 로고
    • Dynamic, structural and regulatory aspects of λ site-specific recombination
    • Landy A. Dynamic, structural and regulatory aspects of λ site-specific recombination. Annu. Rev. Biochem. 58:1989;913-949.
    • (1989) Annu. Rev. Biochem. , vol.58 , pp. 913-949
    • Landy, A.1
  • 20
    • 0027527775 scopus 로고
    • Mycobacteriophage L5 integrase-mediated site-specific recombination in vitro
    • Lee M. H., Hatfull G. F. Mycobacteriophage L5 integrase-mediated site-specific recombination in vitro. J. Bacteriol. 175:1993;6838-6841.
    • (1993) J. Bacteriol. , vol.175 , pp. 6838-6841
    • Lee, M.H.1    Hatfull, G.F.2
  • 21
    • 0026323938 scopus 로고
    • Site-specific integration of mycobacteriophage L5: Integration-proficient vectors for Mycobacterium smegmatis, Mycobacterium tuberculosis and bacille Calmette-Guérin
    • Lee M. H., Pascopella L., Jacobs W. R., Jr, Hatfull G. F. Site-specific integration of mycobacteriophage L5: integration-proficient vectors for Mycobacterium smegmatis, Mycobacterium tuberculosis and bacille Calmette-Guérin. Proc. Natl Acad. Sci. USA. 88:1991;3111-3115.
    • (1991) Proc. Natl Acad. Sci. USA , vol.88 , pp. 3111-3115
    • Lee, M.H.1    Pascopella, L.2    Jacobs W.R., Jr.3    Hatfull, G.F.4
  • 22
    • 0018931537 scopus 로고
    • Integrative recombination of bacteriophage λ: Extent of the DNA sequence involved in attachment site function
    • Mizuuchi M., Mizuuchi K. Integrative recombination of bacteriophage λ: extent of the DNA sequence involved in attachment site function. Proc. Natl Acad. Sci. USA. 77:1980;3220-3224.
    • (1980) Proc. Natl Acad. Sci. USA , vol.77 , pp. 3220-3224
    • Mizuuchi, M.1    Mizuuchi, K.2
  • 23
    • 0024295418 scopus 로고
    • Autonomous DNA binding domains of λ integrase recognize two different sequence families
    • Moitoso de Vargas L., Pargellis C. A., Hasan N., Bushman E., Landy A. Autonomous DNA binding domains of λ integrase recognize two different sequence families. Cell. 54:1988;923-929.
    • (1988) Cell , vol.54 , pp. 923-929
    • Moitoso De Vargas, L.1    Pargellis, C.A.2    Hasan, N.3    Bushman, E.4    Landy, A.5
  • 24
    • 0024340762 scopus 로고
    • DNA looping generated by DNA binding protein IHF and the two domains of lambda integrase
    • Moitoso de Vargas L., Kim S., Landy A. DNA looping generated by DNA binding protein IHF and the two domains of lambda integrase. Science. 244:1989;1457-1461.
    • (1989) Science , vol.244 , pp. 1457-1461
    • Moitoso De Vargas, L.1    Kim, S.2    Landy, A.3
  • 25
    • 0025147545 scopus 로고
    • Specificity determinants in the attachment sites of bacteriophages HK022 and λ
    • Nagaraja R., Weisberg R. A. Specificity determinants in the attachment sites of bacteriophages HK022 and λ J. Bacteriol. 172:1990;6540-6550.
    • (1990) J. Bacteriol. , vol.172 , pp. 6540-6550
    • Nagaraja, R.1    Weisberg, R.A.2
  • 26
    • 0025372188 scopus 로고
    • A comparison of the effects of single-base and triple-base changes in the integrase arm-type binding sites on the site-specific recombination of bacteriophage lambda
    • Numrych T. E., Gumport R. I., Gardner J. F. A comparison of the effects of single-base and triple-base changes in the integrase arm-type binding sites on the site-specific recombination of bacteriophage lambda. Nucl. Acids Res. 18:1990;3953-3959.
    • (1990) Nucl. Acids Res. , vol.18 , pp. 3953-3959
    • Numrych, T.E.1    Gumport, R.I.2    Gardner, J.F.3
  • 27
    • 0028865795 scopus 로고
    • Single base-pair precision and structural rigidity in a small IHF-induced DNA loop
    • Nunes-Düby S. E., Smith-Mungo L. I., Landy A. Single base-pair precision and structural rigidity in a small IHF-induced DNA loop. J. Mol. Biol. 253:1995;228-242.
    • (1995) J. Mol. Biol. , vol.253 , pp. 228-242
    • Nunes-Düby, S.E.1    Smith-Mungo, L.I.2    Landy, A.3
  • 28
    • 0028346659 scopus 로고
    • Use of in vivo complementation in Mycobacterium tuberculosis to identify a genomic fragment associated with virulence
    • Pascopella L., Collins F. M., Martin J. M., Lee M. H., Hatfull G. F., Bloom B. R., Jacobs W. R., Jr. Use of in vivo complementation in Mycobacterium tuberculosis to identify a genomic fragment associated with virulence. Infect. Immun. 62:1994;1313-1319.
    • (1994) Infect. Immun. , vol.62 , pp. 1313-1319
    • Pascopella, L.1    Collins, F.M.2    Martin, J.M.3    Lee, M.H.4    Hatfull, G.F.5    Bloom, B.R.6    Jacobs W.R., Jr.7
  • 30
    • 0029830068 scopus 로고    scopus 로고
    • Positions of strand exchange in mycobacteriophage L5 integration and characterization of the attB site
    • Peña C. E. A., Stoner J. E., Hatfull G. F. Positions of strand exchange in mycobacteriophage L5 integration and characterization of the attB site. J. Bacteriol. 178:1996;5533-5536.
    • (1996) J. Bacteriol. , vol.178 , pp. 5533-5536
    • Peña, C.E.A.1    Stoner, J.E.2    Hatfull, G.F.3
  • 31
    • 0024967060 scopus 로고
    • Transfer RNA genes frequently serve as integration sites for prokaryotic genetic elements
    • Reiter W. D., Palm P., Yeats S. Transfer RNA genes frequently serve as integration sites for prokaryotic genetic elements. Nucl. Acids Res. 17:1989;1907-1914.
    • (1989) Nucl. Acids Res. , vol.17 , pp. 1907-1914
    • Reiter, W.D.1    Palm, P.2    Yeats, S.3
  • 32
    • 0023854278 scopus 로고
    • Synapsis of attachment sites during lambda integrative recombination involves capture of a naked DNA by a protein-DNA complex
    • Richet E., Abcarian P., Nash H. A. Synapsis of attachment sites during lambda integrative recombination involves capture of a naked DNA by a protein-DNA complex. Cell. 52:1988;9-17.
    • (1988) Cell , vol.52 , pp. 9-17
    • Richet, E.1    Abcarian, P.2    Nash, H.A.3
  • 33
    • 0023833241 scopus 로고
    • Bending of the bacteriophage λ attachment site by Escherichia coli integration host factor
    • Robertson C. A., Nash H. A. Bending of the bacteriophage λ attachment site by Escherichia coli integration host factor. J. Biol. Chem. 263:1988;3554-3557.
    • (1988) J. Biol. Chem. , vol.263 , pp. 3554-3557
    • Robertson, C.A.1    Nash, H.A.2
  • 34
    • 0020361203 scopus 로고
    • Bacteriophage λ int protein recognizes two classes of sequence in the phage att site: Characterization of arm-type sites
    • Ross W., Landy A. Bacteriophage λ int protein recognizes two classes of sequence in the phage att site: characterization of arm-type sites. Proc. Natl Acad. Sci. USA. 79:1982;7724-7728.
    • (1982) Proc. Natl Acad. Sci. USA , vol.79 , pp. 7724-7728
    • Ross, W.1    Landy, A.2
  • 35
    • 0002440928 scopus 로고
    • Molecular Cloning:
    • Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press
    • Sambrook J., Fritsch E. F., Maniatis T. Molecular Cloning: A Laboratory Manual. 1989;Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
    • (1989) A Laboratory Manual
    • Sambrook, J.1    Fritsch, E.F.2    Maniatis, T.3
  • 36
    • 0028940695 scopus 로고
    • L5 luciferase reporter mycobacteriophages: A sensitive tool for the detection and assay of live mycobacteria
    • Sarkis G. J., Jacobs W. R., Jr, Hatfull G. F. L5 luciferase reporter mycobacteriophages: a sensitive tool for the detection and assay of live mycobacteria. Mol. Microbiol. 15:1995;1055-1067.
    • (1995) Mol. Microbiol. , vol.15 , pp. 1055-1067
    • Sarkis, G.J.1    Jacobs W.R., Jr.2    Hatfull, G.F.3
  • 39
    • 0025081151 scopus 로고
    • Isolation and characterization of efficient plasmid transformation mutants of Mycobacterium smegmatis
    • Snapper S., Melton R., Keiser T., Jacobs W. R., Jr. Isolation and characterization of efficient plasmid transformation mutants of Mycobacterium smegmatis. Mol. Microbiol. 4:1990;1911-1919.
    • (1990) Mol. Microbiol. , vol.4 , pp. 1911-1919
    • Snapper, S.1    Melton, R.2    Keiser, T.3    Jacobs W.R., Jr.4
  • 40
    • 0024445626 scopus 로고
    • Phasing of protein-induced DNA bends in a recombination complex
    • Snyder U., Thompson J., Landy A. Phasing of protein-induced DNA bends in a recombination complex. Nature. 341:1989;255-257.
    • (1989) Nature , vol.341 , pp. 255-257
    • Snyder, U.1    Thompson, J.2    Landy, A.3
  • 42
    • 0023644993 scopus 로고
    • Protein-protein interactions in a higher-order structure direct lambda site-specific recombination
    • Thompson J. F., Moitoso de Vargas L., Skinner S. E., Landy A. Protein-protein interactions in a higher-order structure direct lambda site-specific recombination. J. Mol. Biol. 195:1987;481-493.
    • (1987) J. Mol. Biol. , vol.195 , pp. 481-493
    • Thompson, J.F.1    Moitoso De Vargas, L.2    Skinner, S.E.3    Landy, A.4
  • 43
    • 0027523479 scopus 로고
    • Characterization of the binding sites of two proteins involved in the bacteriophage P2 site-specific recombination system
    • Yu A., Haggard-Ljungquist E. Characterization of the binding sites of two proteins involved in the bacteriophage P2 site-specific recombination system. J. Bacteriol. 175:1993;1239-1249.
    • (1993) J. Bacteriol. , vol.175 , pp. 1239-1249
    • Yu, A.1    Haggard-Ljungquist, E.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.