Physical distribution of homoeologous recombination in individual chromosomes of Festuca pratensis in Lolium multiflorum

Cytogenetic and Genome Research

Volumn 129, Issue 1-3, 2010, Pages 162-172

  Kopecky D ^a   Havrankova M ^a   Loureiro, J ^b   Castro, S ^b   Lukaszewski, A J ^c   Bartos J ^a   Kopecka J ^d   Dolezel J ^a  

^a INSTITUTE OF EXPERIMENTAL BOTANY   (Czech Republic)

^b UNIVERSITY OF COIMBRA   (Portugal)

^c UNIVERSITY OF CALIFORNIA   (United States)

^d PALACKÝ UNIVERSITY   (Czech Republic)

Author keywords

Chromosome introgression; Festuca; Flow cytometry; Genome size estimation; Homoeologous recombination; Karyotype; Lolium

Indexed keywords

ARTICLE; CHROMOSOME PAIRING; CHROMOSOME SUBSTITUTION; CROSSING OVER; FESTUCA PRATENSIS; FLOW CYTOMETRY; GENOME SIZE; HOMOLOGOUS RECOMBINATION; IN SITU HYBRIDIZATION; KARYOTYPE; LOLIUM MULTIFLORUM; NONHUMAN; PLANT CHROMOSOME; PRIORITY JOURNAL; RYE; FESCUE; FLUORESCENCE IN SITU HYBRIDIZATION; GENETIC RECOMBINATION; GENETICS; HYBRIDIZATION; KARYOTYPING; LOLIUM; PLANT GENOME; SPECIES DIFFERENCE; TELOMERE; TRANSGENIC PLANT;

FESTUCA; FESTUCA PRATENSIS; LOLIUM; LOLIUM MULTIFLORUM;

CHROMOSOMES, PLANT; CROSSING OVER, GENETIC; FESTUCA; GENOME, PLANT; HYBRIDIZATION, GENETIC; IN SITU HYBRIDIZATION, FLUORESCENCE; KARYOTYPING; LOLIUM; PLANTS, GENETICALLY MODIFIED; RECOMBINATION, GENETIC; SPECIES SPECIFICITY; TELOMERE;

EID: 77955289821     PISSN: 14248581     EISSN: None     Source Type: Journal    
DOI: 10.1159/000313379     Document Type: Article

References (61)

1. Akhunov ED, Akhunova AR, Linkiewicz AM, Dubcovsky J, Hummel D, et al: Synteny perturbations between wheat homoeologous chromosomes caused by locus duplications and deletions correlate with recombination rates. Proc Natl Acad Sci USA 100: 10836-10841 (2003a).
2. Akhunov ED, Goodyear AW, Geng S, Qi LL, Echalier B, et al: The organization and rate of evolution of wheat genomes are correlated with recombination rates along chromosome arms. Genome Res 13: 753-763 (2003b).
3. Anderson LK, Lai A, Stack SM, Rizzon C, Gaut BS: Uneven distribution of expressed sequence tag loci on maize pachytene chromosomes. Genome Res 16: 115-122 (2006).
4. Buard J, de Massy B: Playing hide and seek with mammalian meiotic crossover hotspots. Trends Genet 23: 301-309 (2007).
5. Catalán P, Torrecilla P, Rodriguez JAL, Olmstead RG: Phylogeny of the festucoid grasses of subtribe Loliinae and allies (Poeae, Pooideae) inferred from ITS and trnL-F sequences. Mol Phylogenet Evol 31: 517-541 (2004).
6. Černoch V, Našinec I, Šramek P: Share of grassland on landscape forming in the Czech Republic. Czech J Genet Plant Breed 39: 158-162 (2003).
7. Curtis CA, Lukaszewski AJ: Genetic linkage between C-bands and storage protein genes of tetraploid wheat. Theor Appl Genet 81: 245-252 (1991).
8. Doležel J, Greilhuber J, Lucretti S, Meister A, Lysak M, et al: Plant genome size estimation by flow cytometry: inter-laboratory comparison. Ann Bot 82: 17-26 (1998).
9. Dooner HK, Martinez-Ferez IM: Recombination occurs uniformly within the bronze gene, a meiotic recombination hotspot in the maize genome. Plant Cell 9: 1933-1646 (1997).
10. Drouaud J, Camilleri C, Bourguignon PY, Canaguier A, Bérard A, et al: Variation in crossing-over rates across chromosome 4 of Arabidopsis thaliana reveals the presence of meiotic recombination 'hotspots'. Genome Res 16: 106-114 (2006).
11. Dvoiák J, Chen KY: Distribution of nonstructural variation between wheat cultivars along chromosome 6Bp: evidence from the linkage map and physical map of the arm. Genetics 106: 325-333 (1984).
12. Erayman MD, Sandhu D, Sidhu H, Dilbirligi M, Baenziger PS, Gill KS: Demarcating the gene-rich regions of the wheat genome. Nucleic Acids Res 32: 3546-3565 (2004).
13. Fojtík A: Methods of grass improvement used at the plant breeding station Hladké Životice. Genet Pol 35A:25-31 (1994).
14. Francis KE, Lam SY, Harrison BD, Bey AL, Berchowitz LE, Copenhaver GP: Pollen tetradbased visual assay for meiotic recombination in Arabidopsis . Proc Natl Acad Sci USA 104: 3913-3918 (2007).
15. Galbraith DW, Harkins KR, Maddox JM, Ayres NM, Sharma DP, Firoozabady E: Rapid flow cytometric analysis of the cell cycle in intact plant tissues. Science 220: 1049-1051 (1983).
16. Gill KS, Gill BS, Endo TR, Taylor T: Identification and high-density mapping of gene-rich regions in chromosome group 1 of wheat. Genetics 144: 1883-1891 (1996).
17. Greilhuber J, Doležel J, Lysák MA, Bennett MD: The origin, evolution and proposed stabilization of the terms 'genome size', and 'C-value' to describe nuclear DNA contents. Ann Bot 95: 255-260 (2005).
18. Hayward MD, Forster JW, Jones JG, Dolstra O, Evans C, et al: Genetic analysis of Lolium I. Identification of linkage groups and the establishment of a genetic map. Plant Breed 117: 451-455 (1998).
19. Jauhar PP: Cytogenetics of the Festuca - Lolium complex. Relevance to Breeding. Monographs on Theor Appl Genet Vol. 18, p 255 (Springer-Verlag, Berlin 1993).
20. Jeffreys AJ, Neumann R: Factors influencing recombination frequency and distribution in a human meiotic crossover hotspot. Hum Mol Genet 37: 601-606 (2005).
21. Jenczewski E, Eber F, Grimaud A, Huet S, Lucas MO, et al: PrBn , a major gene controlling homeologous pairing in oilseed rape (Brassica napus) haploids. Genetics 164: 645-653 (2003).
22. Jones ES, Dupal MP, Dumsday JL, Hughes LJ, Forster JW: An SSR-based genetic linkage map for perennial ryegrass ( Lolium perenne L.). Theor Appl Genet 105: 577-584 (2002).
23. Jones LE, Rybka K, Lukaszewski AJ: The effect of a deficiency and a deletion on recombination in chromosome 1BL in wheat. Theor Appl Genet 104: 1204-1208 (2002).
24. Karp A, Jones RN: Cytogenetics of Lolium perenne . Part 2. Chiasma distribution in inbred lines. Theor Appl Genet 64: 137-145 (1983).
25. King J, Armstead IP, Donnison IS, Thomas HM, Jones RM, et al: Physical and genetic mapping in the grasses Lolium perenne and Festuca pratensis . Genetics 161: 315-324 (2002).
26. King J, Armstead IP, Donnison IS, Harper JA, Roberts LA, et al: Introgression mapping in the grasses. Chromosome Res 15: 105-113 (2007).
27. Kopecký D, Lukaszewski AJ, Doležel J: Genomic constitution of Festulolium cultivars released in the Czech Republic. Plant Breed 124: 454-458 (2005).
28. Kopecký D, Lukaszewski AJ, Doležel J: Meiotic behavior of individual chromosomes of Festuca pratensis in tetraploid Lolium multiflorum . Chromosome Res 16: 987-998 (2008).
29. Kopecký D, Bartoš J, Zwierzykowski Z, Doležel J: Chromosome pairing of individual genomes in tall fescue ( Festuca arundinacea Schreb.), its progenitors, and hybrids with Italian ryegrass ( Lolium multiflorum Lam.). Cytogenet Genome Res 124: 170-178 (2009a).
30. Kopecký D, Bartoš J, Lukaszewski AJ, Baird JH, Cernoch V, et al: Development and mapping of DArT markers within the Festuca - Lolium complex. BMC Genomics 10: 473 (2009b).
31. Künzel G, Korzum L, Meister A: Cytologically integrated physical restriction fragment length polymorphism maps for the barley genome based on translocation breakpoints. Genetics 154: 397-412 (2000).
32. Kurata N, Nagamura Y, Yamamoto K, Harushima Y, Sue N: A 300-kilobase interval genetic map of rice including 883 expressed sequences. Nat Genet 8: 365-372 (1994).
33. Lawrence GJ, Appels R: Mapping the nucleolar organiser region, seed protein loci and isozyme loci on chromosome 1R in rye. Theor Appl Genet 71: 742-749 (1986).
34. Leitch IJ, Bennett MD: Genome downsizing in polyploid plants. Biol J Linn Soc 82: 651-663 (2004).
35. Leitch IJ, Heslop-Harrison JS: Physical mapping of 4 sites of 5S rRNA sequences and one site of theα -amylase-2 gene in barley (Hordeum vulgare) . Genome 36: 517-523 (1993).
36. Lenormand T, Dutheil J: Recombination difference between sexes: a role for haploid selection. PLoS Biol 3:e63 (2005).
37. Loureiro J, Kopecký D, Castro S, Santos C, Silveira P: Flow cytometric and cytogenetic analyses of Iberian Peninsula Festuca spp. Plant Syst Evol 269: 89-105 (2007).
38. Lukaszewski AJ: A comparison of physical distribution of recombination in chromosome 1R in diploid rye and hexaploid triticale. Theor Appl Genet 83: 1048-1053 (1992).
39. Lukaszewski AJ: Physical distribution of translocation breakpoints in homoeologous recombinants induced by the absence of the Ph1 gene in wheat and triticale. Theor Appl Genet 90: 714-719 (1995).
40. Lukaszewski AJ, Curtis CA: Physical distribution of recombination in B-genome chromosomes of tetraploid wheat. Theor Appl Genet 86: 121-127 (1993).
41. Lukaszewski AJ, Lapinski B, Rybka K: Limitations of in situ hybridization with total genomic DNA in routine screening for alien introgressions in wheat. Cytogenet Genome Res 109: 373-377 (2005).
42. Maguire MP: The pattern of pairing that is effective for crossing over in complex B-A chromosome rearrangements in maize. III. Possible evidence for pairing centers. Chromosoma 94: 71-85 (1986).
43. Masoudi-Nejad A, Nasuda S, McIntosh RA, Endo TR: Transfer of rye chromosome segments to wheat by a gametocidal system. Chromosome Res 10: 349-357 (2002).
44. Mézard C: Meiotic recombination hotspots in plants. Biochem Soc Trans 34: 531-534 (2006).
45. Okagaki RJ, Weil CF: Analysis of recombination sites within the maize waxy locus. Genetics 147: 815-821 (1997).
46. Otto F: DAPI staining of fixed cells for high-resolution flow cytometry of nuclear DNA, in Crissman HA, Darzynkiewicz Z (eds): Methods in Cell Biology, vol.33, pp 105-110 (Academic Press, New York 1990).
47. Qi LL, Friebe B, Gill BS: A strategy for enhancing recombination in proximal regions of chromosomes. Chromosome Res 10: 645-654 (2002).
48. Rees H, Dale PJ: Chiasmata variability in Lolium and Festuca populations. Chromosoma 47: 335-351 (1974).
49. Riley R, Chapman V: Genetic control of the cytologically diploid behaviour of hexaploid wheat. Nature 182: 713-715 (1958).
50. Saintenac C, Falque M, Martin OC, Paux E, Feuillet C, Sourdille P: Detailed recombination studies along chromosome 3B provide new insights on crossover distribution in wheat ( Triticum aestivum L.). Genetics 181: 393-403 (2009).
51. Sall T, Flink J, Bengtsson BO: Genetic-control of recombination in barley. 1. Variation in recombination frequency measured with inversed heterozygotes. Hereditas 112: 157-170 (1990).
52. Seal AG: DNA variation in Festuca . Heredity 50: 225-236 (1983).
53. Sears ER, Okamoto M: Intergenomic chromosome relationships in hexaploid wheat. Proc 10th Int Congr Genet, Montreal 2: 258-259 (1958).
54. Shah MM, Hassan A: Distribution of genes and recombination on wheat homoeologous group 6 chromosomes: a synthesis of available information. Mol Breed 15: 45-53 (2005).
55. Sinha RP, Helgason SB: Action of actinomycin D and diepoxybutane on recombination of 2 closely linked loci in Hordeum . Canad J Genet Cytol 11: 745 (1969).
56. Sybenga J: The zygomere as hypothetical unit of chromosome pairing initiation. Genetica 37: 186-198 (1969).
57. Sybenga J: Meiotic Configurations (Springer-Verlag, Berlin 1975).
58. Thomas HM, Morgan WG, Meredith MR, Humphreys MW, Thomas H, Leggett JM: Identification of parental and recombined chromosomes in hybrid derivatives of Lolium multiflorum ! Festuca pratensis by genomic in situ hybridization. Theor Appl Genet 88: 909-913 (1994).
59. Winckler W, Myers SR, Richter DJ: Comparison of fine-scale recombination rates in humans and chimpanzees. Science 308: 107-111 (2005).
60. Zwierzykowski Z, Lukaszewski AJ, Lesniewska A, Naganowska B: Genomic structure of androgenic progeny of pentaploid hybrids, Festuca arundinacea ! Lolium multiflorum . Plant Breed 117: 457-462 (1998).
61. Zwierzykowski Z, Lukaszewski AJ, Naganowska B, Lesniewska A: The pattern of homoeologous recombination in triploid hybrids of Lolium multiflorum with Festuca pratensis . Genome 42: 720-726 (1999).