Comparison of label-free biosensing in microplate, microfluidic, and spot-based affinity capture assays

Analytical Biochemistry

Volumn 405, Issue 1, 2010, Pages 1-10

  Choi, Charles J ^a   Belobraydich, Alysia R ^a   Chan, Leo L ^a   Mathias, Patrick C ^a   Cunningham, Brian T ^a  

^a University of Illinois at Urbana Champaign   (United States)

Author keywords

Capture affinity assay; Label free biosensor; Microfluidic; Microplate; Photonic crystal; Spot based assay

Indexed keywords

BIOSENSORS; CELL DEATH; CHANNEL FLOW; CHEMICAL DETECTION; LIGANDS; MICROFLUIDICS; PHOTONIC CRYSTALS; RATE CONSTANTS;

ACHIEVABLE PERFORMANCE; AFFINITY ASSAYS; DYNAMIC FINITE ELEMENT SIMULATIONS; FLOW CHANNEL GEOMETRIES; LABEL-FREE BIOSENSING; LABEL-FREE BIOSENSOR; MICROPLATES; TUMOR NECROSIS FACTOR ALPHA;

BIOASSAY;

TUMOR NECROSIS FACTOR ALPHA; GLASS FIBER; IMMOBILIZED ANTIBODY;

ARTICLE; BIOSENSOR; GENETIC PROCEDURES; INTERMETHOD COMPARISON; MICROFLUIDIC ANALYSIS; MICROTITER PLATE ASSAY; PRIORITY JOURNAL; PROTEIN ANALYSIS; COMPARATIVE STUDY; HUMAN; IMMUNOLOGY; MICROFLUIDICS; PROCEDURES; TIME;

ANTIBODIES, IMMOBILIZED; BIOSENSING TECHNIQUES; HUMANS; MICROFLUIDICS; OPTICAL FIBERS; TIME FACTORS; TUMOR NECROSIS FACTOR-ALPHA;

EID: 77955094957     PISSN: 00032697     EISSN: 10960309     Source Type: Journal    
DOI: 10.1016/j.ab.2010.06.009     Document Type: Article

References (36)

1. Lin B., Qiu J., Gerstenmeier J., Li P., Pien H.M., Pepper J., Cunningham B. A label-free optical technique for detecting small molecule interactions. Biosens. Bioelectron. 2002, 17:827-834.
2. Maehashi K., Katsura T., Kerman K., Takamura Y., Matsumoto K., Tamiya E. Label-free protein biosensor based on aptamer-modified carbon nanotube field-effect transistors. Anal. Chem. 2007, 79:782-787.
3. Baker B.R., Lai R.Y., Wood M.S., Doctor E.H., Heeger A.J., Plaxco K.W. An electronic, aptamer-based small-molecule sensor for the rapid, label-free detection of cocaine in adulterated samples and biological fluids. J. Am. Chem. Soc. 2006, 128:3138-3139.
4. Pineda M.F., Chan L.L.Y., Kuhlenschmidt T., Choi C.J., Kuhlenschmidt M., Cunningham B.T. Rapid specific and label-free detection of porcine rotavirus using photonic crystal biosensors. IEEE Sens. J. 2009, 9:470-477.
5. Maalouf R., Fournier-Wirth C., Coste J., Chebib H., Saikali Y., Vittori O., Errachid A., Cloarec J.P., Martelet C., Jaffrezic-Renault N. Label-free detection of bacteria by electrochemical impedance spectroscopy: comparison to surface plasmon resonance. Anal. Chem. 2007, 79:4879-4886.
6. Chan L.L., Gosangari S.L., Watkin K.L., Cunningham B.T. Label-free imaging of cancer cells using photonic crystal biosensors and application to cytotoxicity screening of a natural compound library. Sens. Actuat. B 2008, 132:418-425.
7. Cooper M.A. Label-free screening of bio-molecular interactions. Anal. Bioanal. Chem. 2003, 377:834-842.
8. Zhu H.Y., White I.M., Suter J.D., Fan X.D. Phage-based label-free biomolecule detection in an opto-fluidic ring resonator. Biosens. Bioelectron. 2008, 24:461-466.
9. Rich R.L., Myszka D.G. Higher throughput, label-free, real-time molecular interaction analysis. Anal. Biochem. 2007, 361:1-6.
10. Taylor A.D., Ladd J., Yu Q.M., Chen S.F., Homola J., Jiang S.Y. Quantitative and simultaneous detection of four foodborne bacterial pathogens with a multi-channel SPR sensor. Biosens. Bioelectron. 2006, 22:752-758.
11. Barzen C., Brecht A., Gauglitz G. Optical multiple-analyte immunosensor for water pollution control. Biosens. Bioelectron. 2002, 17:289-295.
12. Glaser R.W. Antigen-antibody binding and mass transport by convection and diffusion to a surface: a 2-dimensional computer model of binding and dissociation kinetics. Anal. Biochem. 1993, 213:152-161.
13. Schuck P., Minton A.P. Analysis of mass transport-limited binding kinetics in evanescent wave biosensors. Anal. Biochem. 1996, 240:262-272.
14. Cunningham B.T., Li P., Schulz S., Lin B., Baird C., Gerstenmaier J., Genick C., Wang F., Fine E., Laing L. Label-free assays on the BIND system. J. Biomol. Screen. 2004, 9:481-490.
15. Ciambrone G.J., Liu V.F., Lin D.C., McGuinness R.P., Leung G.K., Pitchford S. Cellular dielectric spectroscopy: a powerful new approach to label-free cellular analysis. J. Biomol. Screen. 2004, 9:467-480.
16. Armani A.M., Kulkarni R.P., Fraser S.E., Flagan R.C., Vahala K.J. Label-free, single-molecule detection with optical microcavities. Science 2007, 317:783-787.
17. Vollmer F., Arnold S. Whispering-gallery-mode biosensing: label-free detection down to single molecules. Nat. Methods 2008, 5:591-596.
18. Wassaf D., Kuang G.N., Kopacz K., Wu Q.L., Nguyen Q., Toews M., Cosic J., Jacques J., Wiltshire S., Lambert J., Pazmany C.C., Hogan S., Ladner R.C., Nixon A.E., Sexton D.J. High-throughput affinity ranking of antibodies using surface plasmon resonance microarrays. Anal. Biochem. 2006, 351:241-253.
19. Ozkumur E., Needham J.W., Bergstein D.A., Gonzalez R., Cabodi M., Gershoni J.M., Goldberg B.B., Unlu M.S. Label-free and dynamic detection of biomolecular interactions for high-throughput microarray applications. Proc. Natl. Acad. Sci. USA 2008, 105:7988-7992.
20. Zhao M., Wang X.F., Nolte D.D. Molecular interferometric imaging. Optics Express 2008, 16:7102-7118.
21. Rich R.L., Cannon M.J., Jenkins J., Pandian P., Sundaram S., Magyar R., Brockman J., Lambert J., Myszka D.G. Extracting kinetic rate constants from surface plasmon resonance array systems. Anal. Biochem. 2008, 373:112-120.
22. McKendry R., Zhang J.Y., Arntz Y., Strunz T., Hegner M., Lang H.P., Baller M.K., Certa U., Meyer E., Guntherodt H.J., Gerber C. Multiple label-free biodetection and quantitative DNA-binding assays on a nanomechanical cantilever array. Proc. Natl. Acad. Sci. USA 2002, 99:9783-9788.
23. Gao Z.Q., Agarwal A., Trigg A.D., Singh N., Fang C., Tung C.H., Fan Y., Buddharaju K.D., Kong J.M. Silicon nanowire arrays for label-free detection of DNA. Anal. Chem. 2007, 79:3291-3297.
24. Washburn A.L., Gunn L.C., Bailey R.C. Label-free quantitation of a cancer biomarker in complex media using silicon photonic microring resonators. Anal. Chem. 2009, 81:9499-9506.
25. Mandal S., Erickson D. Nanoscale optofluidic sensor arrays. Optics Express 2008, 16:1623-1631.
26. Barbulovic-Nad I., Lucente M., Sun Y., Zhang M.J., Wheeler A.R., Bussmann M. Bio-microarray fabrication techniques: a review. Crit. Rev. Biotechnol. 2006, 26:237-259.
27. Choi C.J., Cunningham B.T. Single-step fabrication and characterization of photonic crystal biosensors with polymer microfluidic channels. Lab. Chip. 2006, 6:1373-1380.
28. Choi C.J., Cunningham B.T. A 96-well microplate incorporating a replica molded microfluidic network integrated with photonic crystal biosensors for high throughput kinetic biomolecular interaction analysis. Lab. Chip. 2007, 7:550-556.
29. Schudel B.R., Choi C.J., Cunningham B.T., Kenis P.J.A. Microfluidic chip for combinatorial mixing and screening of assays. Lab. Chip. 2009, 9:1676-1680.
30. Chan L.L., Cunningham B.T., Li P.Y., Puff D. A self-referencing method for microplate label-free photonic-crystal biosensors. IEEE Sens. J. 2006, 6:1551-1556.
31. Magnusson R., Wang S.S. New principle for optical filters. Appl. Phys. Lett. 1992, 61:1022-1024.
32. Rosenblatt D., Sharon A., Friesem A.A. Resonant grating waveguide structures. IEEE J. Quantum Electron. 1997, 33:2038-2059.
33. Zhang W., Ganesh N., Block I.D., Cunningham B.T. High sensitivity photonic crystal biosensor incorporating nanorod structures for enhanced surface area. Sens. Actuat. B 2008, 131:279-284.
34. Choi C.J., Block I.D., Bole B., Dralle D., Cunningham B.T. Label-free photonic crystal biosensor integrated microfluidic chip for determination of kinetic reaction rate constants. IEEE Sens. J. 2009, 9:1697-1704.
35. Edwards P.R., Leatherbarrow R.J. Determination of association rate constants by an optical biosensor using initial rate analysis. Anal. Biochem. 1997, 246:1-6.
36. Liu Y., Zhang W., Yu X., Zhang H.W., Zhao R., Shangguan D., Li Y., Shen B.F., Liu G.Q. Quartz crystal biosensor for real-time kinetic analysis of interaction between human TNF-α and monoclonal antibodies. Sens. Actuat. B 2004, 99:416-424.