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Volumn 6, Issue 3, 2010, Pages 377-387

Landscape genetic structure of Betula maximowicziana in the Chichibu mountain range, central Japan

Author keywords

Betula maximowicziana; Chichibu mountain range; Genetic barrier; Genetic diversity; Landscape genetics; Monmonier's and SAMOVA algorithms; STRUCTURE analysis

Indexed keywords

BETULA MAXIMOWICZIANA;

EID: 77955052970     PISSN: 16142942     EISSN: 16142950     Source Type: Journal    
DOI: 10.1007/s11295-009-0256-3     Document Type: Article
Times cited : (17)

References (46)
  • 1
    • 0141615456 scopus 로고    scopus 로고
    • A combination of molecular markers identifies evolutionarily significant units in Cedrela odorata L. (Meliaceae) in Costa Rica
    • Cavers S, Navarro C, Lowe AJ (2003) A combination of molecular markers identifies evolutionarily significant units in Cedrela odorata L. (Meliaceae) in Costa Rica. Conservat Genet 4: 571-580.
    • (2003) Conservat Genet , vol.4 , pp. 571-580
    • Cavers, S.1    Navarro, C.2    Lowe, A.J.3
  • 2
    • 3843065663 scopus 로고    scopus 로고
    • Targeting genetic resource conservation in widespread species: A case study of Cedrela odorata L
    • Cavers S, Navarro C, Lowe AJ (2004) Targeting genetic resource conservation in widespread species: a case study of Cedrela odorata L. For Ecol Manag 197: 285-294.
    • (2004) For Ecol Manag , vol.197 , pp. 285-294
    • Cavers, S.1    Navarro, C.2    Lowe, A.J.3
  • 3
    • 0030478757 scopus 로고    scopus 로고
    • Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data
    • Cornuet JM, Luikart G (1996) Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data. Genetics 144: 2001-2014.
    • (1996) Genetics , vol.144 , pp. 2001-2014
    • Cornuet, J.M.1    Luikart, G.2
  • 4
    • 0037346501 scopus 로고    scopus 로고
    • MICROSATELLITE ANALYZER (MSA): A platform independent analysis tool for large microsatellite data sets
    • Dieringer D, Schlötterer C (2003) MICROSATELLITE ANALYZER (MSA): a platform independent analysis tool for large microsatellite data sets. Mol Ecol Notes 3: 167-169.
    • (2003) Mol Ecol Notes , vol.3 , pp. 167-169
    • Dieringer, D.1    Schlötterer, C.2
  • 5
    • 0036900038 scopus 로고    scopus 로고
    • A simulated annealing approach of define the genetic structure of populations
    • Dupanloup I, Schneider S, Excoffier L (2002) A simulated annealing approach of define the genetic structure of populations. Mol Ecol 11: 12571-12581.
    • (2002) Mol Ecol , vol.11 , pp. 12571-12581
    • Dupanloup, I.1    Schneider, S.2    Excoffier, L.3
  • 6
    • 0029759465 scopus 로고    scopus 로고
    • High level of genetic differentiation for allelic richness among populations of the argan tree (Argania spinosa (L.) Skeels) endemic to Morocco
    • El Mousadik A, Petit RJ (1996) High level of genetic differentiation for allelic richness among populations of the argan tree (Argania spinosa (L.) Skeels) endemic to Morocco. Theor Appl Genet 92: 832-839.
    • (1996) Theor Appl Genet , vol.92 , pp. 832-839
    • El Mousadik, A.1    Petit, R.J.2
  • 7
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of clusters of individuals using the software STRUCTURE: A simulation study
    • Evanno G, Regnaut S, Goudet J (2005) Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol Ecol 14: 2611-2620.
    • (2005) Mol Ecol , vol.14 , pp. 2611-2620
    • Evanno, G.1    Regnaut, S.2    Goudet, J.3
  • 8
    • 0026681074 scopus 로고
    • Analysis of molecular variance inferred from metric distance among DNA haplotypes: Application to human mitochondrial DNA restriction data
    • Excoffier L, Smouse PE, Quattro JM (1992) Analysis of molecular variance inferred from metric distance among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131: 479-491.
    • (1992) Genetics , vol.131 , pp. 479-491
    • Excoffier, L.1    Smouse, P.E.2    Quattro, J.M.3
  • 10
    • 0041817568 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data: Linked loci and correlated allele frequencies
    • Falush D, Stephens M, Pritchard JK (2003) Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies. Genetics 164: 1567-1687.
    • (2003) Genetics , vol.164 , pp. 1567-1687
    • Falush, D.1    Stephens, M.2    Pritchard, J.K.3
  • 11
    • 13444291748 scopus 로고    scopus 로고
    • Population structure of Colombia spotted frogs (Rana luteiventris) is strongly affected by the landscape
    • Funk WC, Blouin MS, Corn PS, Maxell BA, Pilliod DS, Amish S, Allendorf FW (2005) Population structure of Colombia spotted frogs (Rana luteiventris) is strongly affected by the landscape. Mol Ecol 14: 483-496.
    • (2005) Mol Ecol , vol.14 , pp. 483-496
    • Funk, W.C.1    Blouin, M.S.2    Corn, P.S.3    Maxell, B.A.4    Pilliod, D.S.5    Amish, S.6    Allendorf, F.W.7
  • 14
    • 23344443817 scopus 로고    scopus 로고
    • A spatial statistical model for landscape genetics
    • Guillot G, Estoup A, Mortier F, Cosson JF (2005) A spatial statistical model for landscape genetics. Genetics 170: 1261-1280.
    • (2005) Genetics , vol.170 , pp. 1261-1280
    • Guillot, G.1    Estoup, A.2    Mortier, F.3    Cosson, J.F.4
  • 15
    • 0033539058 scopus 로고    scopus 로고
    • Tropical tree gene flow and seed dispersal
    • Hamilton MB (1999) Tropical tree gene flow and seed dispersal. Nature 401: 129-130.
    • (1999) Nature , vol.401 , pp. 129-130
    • Hamilton, M.B.1
  • 16
    • 24644446846 scopus 로고    scopus 로고
    • A standardized genetic differentiation measure
    • Hedrick PW (2005) A standardized genetic differentiation measure. Evolution 59: 1633-1638.
    • (2005) Evolution , vol.59 , pp. 1633-1638
    • Hedrick, P.W.1
  • 17
    • 68949103876 scopus 로고    scopus 로고
    • Inferring weak population structure with the assistance of sample group information
    • Hubisz M, Falush D, Stephens M, Pritchard JK (2009) Inferring weak population structure with the assistance of sample group information. Mol Ecol Resour 9: 1322-1332.
    • (2009) Mol Ecol Resour , vol.9 , pp. 1322-1332
    • Hubisz, M.1    Falush, D.2    Stephens, M.3    Pritchard, J.K.4
  • 18
    • 33744503649 scopus 로고    scopus 로고
    • Genetic effects of chronic habitat fragmentation in a wind-pollinated tree
    • Jump AS, Peñuelas J (2006) Genetic effects of chronic habitat fragmentation in a wind-pollinated tree. Proc Natl Acad Sci U S A 103: 8096-8100.
    • (2006) Proc Natl Acad Sci U S A , vol.103 , pp. 8096-8100
    • Jump, A.S.1    Peñuelas, J.2
  • 21
    • 0037376204 scopus 로고    scopus 로고
    • Landscape genetics: Combining landscape ecology and population genetics
    • Manel S, Schwartz MK, Luikart G, Taberlet P (2003) Landscape genetics: combining landscape ecology and population genetics. Trends Ecol Evol 18: 189-197.
    • (2003) Trends Ecol Evol , vol.18 , pp. 189-197
    • Manel, S.1    Schwartz, M.K.2    Luikart, G.3    Taberlet, P.4
  • 22
    • 3543035788 scopus 로고    scopus 로고
    • Geographic patterns of (genetic, morphologic, linguistic) variation: How barriers can be detected by using Monmonier's algorithm
    • Manni F, Guérard E, Heyer E (2004) Geographic patterns of (genetic, morphologic, linguistic) variation: how barriers can be detected by using Monmonier's algorithm. Hum Biol 76: 173-190.
    • (2004) Hum Biol , vol.76 , pp. 173-190
    • Manni, F.1    Guérard, E.2    Heyer, E.3
  • 23
    • 84977403526 scopus 로고
    • Maximum-difference barriers: An alternative numerical regionalization method
    • Monmonier M (1973) Maximum-difference barriers: an alternative numerical regionalization method. Geogr Anal 5: 245-261.
    • (1973) Geogr Anal , vol.5 , pp. 245-261
    • Monmonier, M.1
  • 25
    • 0020965531 scopus 로고
    • Accuracy of estimated phylogenic trees from molecular data
    • Nei M, Tajima F, Tateno Y (1983) Accuracy of estimated phylogenic trees from molecular data. J Mol Evol 19: 153-170.
    • (1983) J Mol Evol , vol.19 , pp. 153-170
    • Nei, M.1    Tajima, F.2    Tateno, Y.3
  • 26
    • 0033120607 scopus 로고    scopus 로고
    • Molecular phylogeography, intraspecific variation and the conservation of tree species
    • Newton AC, Allnut TR, Gillies ACM, Lowe AJ, Ennos RA (1999) Molecular phylogeography, intraspecific variation and the conservation of tree species. Trends Ecol Evol 14: 140-145.
    • (1999) Trends Ecol Evol , vol.14 , pp. 140-145
    • Newton, A.C.1    Allnut, T.R.2    Gillies, A.C.M.3    Lowe, A.J.4    Ennos, R.A.5
  • 27
    • 0037792195 scopus 로고    scopus 로고
    • Identification and characterization of microsatellite loci in Betula maximowicziana Regel
    • Ogyu K, Tsuda Y, Sugaya T, Yoshimaru H, Ide Y (2003) Identification and characterization of microsatellite loci in Betula maximowicziana Regel. Mol Ecol Notes 3: 268-269.
    • (2003) Mol Ecol Notes , vol.3 , pp. 268-269
    • Ogyu, K.1    Tsuda, Y.2    Sugaya, T.3    Yoshimaru, H.4    Ide, Y.5
  • 28
    • 38949161847 scopus 로고    scopus 로고
    • Global patterns of genetic variation in plant species along vertical and horizontal gradients on mountains
    • Ohsawa T, Ide Y (2008) Global patterns of genetic variation in plant species along vertical and horizontal gradients on mountains. Glob Ecol Biogeogr 17: 152-163.
    • (2008) Glob Ecol Biogeogr , vol.17 , pp. 152-163
    • Ohsawa, T.1    Ide, Y.2
  • 29
    • 0030613045 scopus 로고    scopus 로고
    • Seedling emergence of Betula maximowicziana following human disturbance and the role of buried viable seeds
    • Osumi K, Sakurai S (1997) Seedling emergence of Betula maximowicziana following human disturbance and the role of buried viable seeds. For Ecol Manag 93: 235-243.
    • (1997) For Ecol Manag , vol.93 , pp. 235-243
    • Osumi, K.1    Sakurai, S.2
  • 30
    • 33644871292 scopus 로고    scopus 로고
    • GENALEX 6: Genetic analysis in Excel. Population genetic software for teaching and research
    • Peakall R, Smouse PE (2005) GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol Ecol Notes 6: 288-295.
    • (2005) Mol Ecol Notes , vol.6 , pp. 288-295
    • Peakall, R.1    Smouse, P.E.2
  • 31
    • 0032880393 scopus 로고    scopus 로고
    • Bottleneck: A computer program for detecting recent reductions in the effective population size using allele frequency data
    • Piry S, Luikart G, Cornuet JM (1999) Bottleneck: a computer program for detecting recent reductions in the effective population size using allele frequency data. J Heredity 90: 502-503.
    • (1999) J Heredity , vol.90 , pp. 502-503
    • Piry, S.1    Luikart, G.2    Cornuet, J.M.3
  • 32
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155: 945-959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 34
    • 1342331102 scopus 로고    scopus 로고
    • DISTRUCT: A program for the graphical display of population structure
    • Rosenberg NA (2004) DISTRUCT: a program for the graphical display of population structure. Mol Ecol Notes 4: 137-138.
    • (2004) Mol Ecol Notes , vol.4 , pp. 137-138
    • Rosenberg, N.A.1
  • 35
    • 0030888985 scopus 로고    scopus 로고
    • Genetic differentiation and estimation of gene flow from F-statistics under isolation by distance
    • Rousset F (1997) Genetic differentiation and estimation of gene flow from F-statistics under isolation by distance. Genetics 145: 1219-1228.
    • (1997) Genetics , vol.145 , pp. 1219-1228
    • Rousset, F.1
  • 36
    • 33746764987 scopus 로고    scopus 로고
    • Genetic analysis of landscape connectivity in tree populations
    • Sork V, Smouse PE (2006) Genetic analysis of landscape connectivity in tree populations. Landsc Ecol 21: 821-836.
    • (2006) Landsc Ecol , vol.21 , pp. 821-836
    • Sork, V.1    Smouse, P.E.2
  • 38
    • 33646191064 scopus 로고    scopus 로고
    • Wide-range analysis of genetic structure of Betula maximowicziana, a long-lived pioneer tree species and noble hardwood in the cool temperate zone of Japan
    • Tsuda Y, Ide Y (2005) Wide-range analysis of genetic structure of Betula maximowicziana, a long-lived pioneer tree species and noble hardwood in the cool temperate zone of Japan. Mol Ecol 14: 3929-3941.
    • (2005) Mol Ecol , vol.14 , pp. 3929-3941
    • Tsuda, Y.1    Ide, Y.2
  • 39
    • 20044382699 scopus 로고    scopus 로고
    • RAPD analysis of genetic variation within and among four natural populations of Betula maximowicziana
    • Tsuda Y, Goto S, Ide Y (2004) RAPD analysis of genetic variation within and among four natural populations of Betula maximowicziana. Silvae Genet 53: 234-239.
    • (2004) Silvae Genet , vol.53 , pp. 234-239
    • Tsuda, Y.1    Goto, S.2    Ide, Y.3
  • 40
    • 0000900679 scopus 로고
    • Genetic structure of geographical marginal populations of Cryptomeria japonica
    • Tsumura Y, Ohba K (1993) Genetic structure of geographical marginal populations of Cryptomeria japonica. Can J For Res 23: 859-863.
    • (1993) Can J For Res , vol.23 , pp. 859-863
    • Tsumura, Y.1    Ohba, K.2
  • 41
    • 36749094361 scopus 로고    scopus 로고
    • Genetic diversity and genetic structure of adult and buried seed populations of Betula maximowicziana in mixed and post-fire stands
    • Uchiyama K, Goto S, Tsuda Y, Takahashi Y, Ide Y (2006) Genetic diversity and genetic structure of adult and buried seed populations of Betula maximowicziana in mixed and post-fire stands. For Ecol Manag 237: 119-126.
    • (2006) For Ecol Manag , vol.237 , pp. 119-126
    • Uchiyama, K.1    Goto, S.2    Tsuda, Y.3    Takahashi, Y.4    Ide, Y.5
  • 42
    • 8844247605 scopus 로고
    • Silvical characteristics of Betula maximowicziana
    • (in Japanese)
    • Watanabe S (1989) Silvical characteristics of Betula maximowicziana. Forest Tree Breeding of Hokkaido 32: 15-18 (in Japanese).
    • (1989) Forest Tree Breeding of Hokkaido , vol.32 , pp. 15-18
    • Watanabe, S.1
  • 43
    • 0021566877 scopus 로고
    • Estimating f-statistics for the analysis of population structure
    • Weir BS, Cockerham CC (1984) Estimating f-statistics for the analysis of population structure. Evolution 38: 1358-1370.
    • (1984) Evolution , vol.38 , pp. 1358-1370
    • Weir, B.S.1    Cockerham, C.C.2
  • 44
    • 0034885241 scopus 로고    scopus 로고
    • Sources of genetic structure in the woody perennial Betula occidentalis
    • Williams JH, Arnold ML (2001) Sources of genetic structure in the woody perennial Betula occidentalis. Int J Plant Sci 162: 1097-1109.
    • (2001) Int J Plant Sci , vol.162 , pp. 1097-1109
    • Williams, J.H.1    Arnold, M.L.2
  • 45
    • 0001024012 scopus 로고
    • Isolation by distance
    • Wright S (1943) Isolation by distance. Genetics 28: 114-138.
    • (1943) Genetics , vol.28 , pp. 114-138
    • Wright, S.1
  • 46
    • 0036897714 scopus 로고    scopus 로고
    • Development of microsatellite markers in white birch (Betula platyphylla var. japonica)
    • Wu B, Lian C, Hogetsu T (2002) Development of microsatellite markers in white birch (Betula platyphylla var. japonica). Mol Ecol Notes 2: 413-415.
    • (2002) Mol Ecol Notes , vol.2 , pp. 413-415
    • Wu, B.1    Lian, C.2    Hogetsu, T.3


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