-
1
-
-
32644450616
-
Molecular mechanisms of mammalian global genome nucleotide excision repair
-
Gillet L.C., Schärer O.D. Molecular mechanisms of mammalian global genome nucleotide excision repair. Chem. Rev. 2006, 106:253-276.
-
(2006)
Chem. Rev.
, vol.106
, pp. 253-276
-
-
Gillet, L.C.1
Schärer, O.D.2
-
2
-
-
0032742715
-
DNA damage recognition during nucleotide excision repair in mammalian cells
-
Wood R.D. DNA damage recognition during nucleotide excision repair in mammalian cells. Biochimie 1999, 81:39-44.
-
(1999)
Biochimie
, vol.81
, pp. 39-44
-
-
Wood, R.D.1
-
3
-
-
35548986675
-
Dynamics of a benzo[a]pyrene-derived guanine DNA lesion in TGT and CGC sequence contexts: enhanced mobility in TGT explains conformational heterogeneity, flexible bending, and greater susceptibility to nucleotide excision repair
-
Cai Y., Patel D.J., Geacintov N.E., Broyde S. Dynamics of a benzo[a]pyrene-derived guanine DNA lesion in TGT and CGC sequence contexts: enhanced mobility in TGT explains conformational heterogeneity, flexible bending, and greater susceptibility to nucleotide excision repair. J. Mol. Biol. 2007, 374:292-305.
-
(2007)
J. Mol. Biol.
, vol.374
, pp. 292-305
-
-
Cai, Y.1
Patel, D.J.2
Geacintov, N.E.3
Broyde, S.4
-
4
-
-
57749188239
-
Differential nucleotide excision repair susceptibility of bulky DNA adducts in different sequence contexts: hierarchies of recognition signals
-
Cai Y., Patel D.J., Geacintov N.E., Broyde S. Differential nucleotide excision repair susceptibility of bulky DNA adducts in different sequence contexts: hierarchies of recognition signals. J. Mol. Biol. 2009, 385:30-44.
-
(2009)
J. Mol. Biol.
, vol.385
, pp. 30-44
-
-
Cai, Y.1
Patel, D.J.2
Geacintov, N.E.3
Broyde, S.4
-
5
-
-
60849122212
-
The sequence dependence of human nucleotide excision repair efficiencies of benzo[a]pyrene-derived DNA lesions: insights into the structural factors that favor dual incisions
-
Kropachev K., Kolbanovskii M., Cai Y., Rodriguez F., Kolbanovskii A., Liu Y., et al. The sequence dependence of human nucleotide excision repair efficiencies of benzo[a]pyrene-derived DNA lesions: insights into the structural factors that favor dual incisions. J. Mol. Biol. 2009, 386:1193-1203.
-
(2009)
J. Mol. Biol.
, vol.386
, pp. 1193-1203
-
-
Kropachev, K.1
Kolbanovskii, M.2
Cai, Y.3
Rodriguez, F.4
Kolbanovskii, A.5
Liu, Y.6
-
6
-
-
34250177258
-
Sequence context- and temperature-dependent nucleotide excision repair of a benzo[a]pyrene diol epoxide-guanine DNA adduct catalyzed by thermophilic UvrABC proteins
-
Ruan Q., Liu T., Kolbanovskiy A., Liu Y., Ren J., Skorvaga M., et al. Sequence context- and temperature-dependent nucleotide excision repair of a benzo[a]pyrene diol epoxide-guanine DNA adduct catalyzed by thermophilic UvrABC proteins. Biochemistry 2007, 46:7006-7015.
-
(2007)
Biochemistry
, vol.46
, pp. 7006-7015
-
-
Ruan, Q.1
Liu, T.2
Kolbanovskiy, A.3
Liu, Y.4
Ren, J.5
Skorvaga, M.6
-
7
-
-
13444273224
-
Nature and nurture - lessons from chemical carcinogenesis
-
Luch A. Nature and nurture - lessons from chemical carcinogenesis. Nat. Rev. Cancer 2005, 5:113-125.
-
(2005)
Nat. Rev. Cancer
, vol.5
, pp. 113-125
-
-
Luch, A.1
-
8
-
-
0020523616
-
Fifty years of benzo(a)pyrene
-
Phillips D.H. Fifty years of benzo(a)pyrene. Nature 1983, 303:468-472.
-
(1983)
Nature
, vol.303
, pp. 468-472
-
-
Phillips, D.H.1
-
9
-
-
0020431144
-
Induction of microsomal enzymes by foreign chemicals and carcinogenesis by polycyclic aromatic hydrocarbons: G. H. A. Clowes memorial lecture
-
Conney A.H. Induction of microsomal enzymes by foreign chemicals and carcinogenesis by polycyclic aromatic hydrocarbons: G. H. A. Clowes memorial lecture. Cancer Res. 1982, 42:4875-4917.
-
(1982)
Cancer Res.
, vol.42
, pp. 4875-4917
-
-
Conney, A.H.1
-
10
-
-
0026527186
-
Solution conformation of the major adduct between the carcinogen (+)-anti-benzo[a]pyrene diol epoxide and DNA
-
Cosman M., de los Santos C., Fiala R., Hingerty B.E., Singh S.B., Ibanez V., et al. Solution conformation of the major adduct between the carcinogen (+)-anti-benzo[a]pyrene diol epoxide and DNA. Proc. Natl Acad. Sci. USA 1992, 89:1914-1918.
-
(1992)
Proc. Natl Acad. Sci. USA
, vol.89
, pp. 1914-1918
-
-
Cosman, M.1
de los Santos, C.2
Fiala, R.3
Hingerty, B.E.4
Singh, S.B.5
Ibanez, V.6
-
11
-
-
34247213435
-
Exocyclic amino groups of flanking guanines govern sequence-dependent adduct conformations and local structural distortions for minor groove-aligned benzo[a]pyrenyl-guanine lesions in a GG mutation hotspot context
-
Rodriguez F.A., Cai Y., Lin C., Tang Y., Kolbanovskiy A., Amin S., et al. Exocyclic amino groups of flanking guanines govern sequence-dependent adduct conformations and local structural distortions for minor groove-aligned benzo[a]pyrenyl-guanine lesions in a GG mutation hotspot context. Nucleic Acids Res. 2007, 35:1555-1568.
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. 1555-1568
-
-
Rodriguez, F.A.1
Cai, Y.2
Lin, C.3
Tang, Y.4
Kolbanovskiy, A.5
Amin, S.6
-
12
-
-
33646768613
-
Poor base stacking at DNA lesions may initiate recognition by many repair proteins
-
Yang W. Poor base stacking at DNA lesions may initiate recognition by many repair proteins. DNA Repair (Amst) 2006, 5:654-666.
-
(2006)
DNA Repair (Amst)
, vol.5
, pp. 654-666
-
-
Yang, W.1
-
13
-
-
38049110204
-
Structure and mechanism for DNA lesion recognition
-
Yang W. Structure and mechanism for DNA lesion recognition. Cell Res. 2008, 18:184-197.
-
(2008)
Cell Res.
, vol.18
, pp. 184-197
-
-
Yang, W.1
-
14
-
-
1842785956
-
A model for initial DNA lesion recognition by NER and MMR based on local conformational flexibility
-
Isaacs R.J., Spielmann H.P. A model for initial DNA lesion recognition by NER and MMR based on local conformational flexibility. DNA Repair (Amst) 2004, 3:455-464.
-
(2004)
DNA Repair (Amst)
, vol.3
, pp. 455-464
-
-
Isaacs, R.J.1
Spielmann, H.P.2
-
15
-
-
0036167911
-
Fluorescence characteristics of site-specific and stereochemically distinct benzo[a]pyrene diol epoxide-DNA adducts as probes of adduct conformation
-
Huang W., Amin S., Geacintov N.E. Fluorescence characteristics of site-specific and stereochemically distinct benzo[a]pyrene diol epoxide-DNA adducts as probes of adduct conformation. Chem. Res. Toxicol. 2002, 15:118-126.
-
(2002)
Chem. Res. Toxicol.
, vol.15
, pp. 118-126
-
-
Huang, W.1
Amin, S.2
Geacintov, N.E.3
-
17
-
-
77954758571
-
-
Optical spectroscopic and NMR studies of covalent polycyclic aromatic hydrocarbons-DNA adducts: influence of base sequence context and carcinogen topology. PhD thesis, Chemistry Department, New York University, New York.
-
Tang, Y. (2008). Optical spectroscopic and NMR studies of covalent polycyclic aromatic hydrocarbons-DNA adducts: influence of base sequence context and carcinogen topology. PhD thesis, Chemistry Department, New York University, New York.
-
(2008)
-
-
Tang, Y.1
-
18
-
-
0032492642
-
Sequence dependence and characteristics of bends induced by site-specific polynuclear aromatic carcinogen-deoxyguanosine lesions in oligonucleotides
-
Tsao H., Mao B., Zhuang P., Xu R., Amin S., Geacintov N.E. Sequence dependence and characteristics of bends induced by site-specific polynuclear aromatic carcinogen-deoxyguanosine lesions in oligonucleotides. Biochemistry 1998, 37:4993-5000.
-
(1998)
Biochemistry
, vol.37
, pp. 4993-5000
-
-
Tsao, H.1
Mao, B.2
Zhuang, P.3
Xu, R.4
Amin, S.5
Geacintov, N.E.6
-
19
-
-
0029070122
-
Stereochemistry-dependent bending in oligonucleotide duplexes induced by site-specific covalent benzo[a]pyrene diol epoxide-guanine lesions
-
Xu R., Mao B., Xu J., Li B., Birke S., Swenberg C.E., Geacintov N.E. Stereochemistry-dependent bending in oligonucleotide duplexes induced by site-specific covalent benzo[a]pyrene diol epoxide-guanine lesions. Nucleic Acids Res. 1995, 23:2314-2319.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 2314-2319
-
-
Xu, R.1
Mao, B.2
Xu, J.3
Li, B.4
Birke, S.5
Swenberg, C.E.6
Geacintov, N.E.7
-
20
-
-
0027159020
-
CA runs increase DNA flexibility in the complex of lambda Cro protein with the OR3 site
-
Lyubchenko Y.L., Shlyakhtenko L.S., Appella E., Harrington R.E. CA runs increase DNA flexibility in the complex of lambda Cro protein with the OR3 site. Biochemistry 1993, 32:4121-4127.
-
(1993)
Biochemistry
, vol.32
, pp. 4121-4127
-
-
Lyubchenko, Y.L.1
Shlyakhtenko, L.S.2
Appella, E.3
Harrington, R.E.4
-
21
-
-
0028200990
-
CA/TG sequence at the 5' end of oligo(A)-tracts strongly modulates DNA curvature
-
Nagaich A.K., Bhattacharyya D., Brahmachari S.K., Bansal M. CA/TG sequence at the 5' end of oligo(A)-tracts strongly modulates DNA curvature. J. Biol. Chem. 1994, 269:7824-7833.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 7824-7833
-
-
Nagaich, A.K.1
Bhattacharyya, D.2
Brahmachari, S.K.3
Bansal, M.4
-
22
-
-
0032530555
-
DNA sequence-dependent deformability deduced from protein-DNA crystal complexes
-
Olson W.K., Gorin A.A., Lu X.J., Hock L.M., Zhurkin V.B. DNA sequence-dependent deformability deduced from protein-DNA crystal complexes. Proc. Natl Acad. Sci. USA 1998, 95:11163-11168.
-
(1998)
Proc. Natl Acad. Sci. USA
, vol.95
, pp. 11163-11168
-
-
Olson, W.K.1
Gorin, A.A.2
Lu, X.J.3
Hock, L.M.4
Zhurkin, V.B.5
-
23
-
-
58749098419
-
DNA repair phenotype and cancer susceptibility-a mini review
-
Li C., Wang L.E., Wei Q. DNA repair phenotype and cancer susceptibility-a mini review. Int. J. Cancer 2009, 124:999-1007.
-
(2009)
Int. J. Cancer
, vol.124
, pp. 999-1007
-
-
Li, C.1
Wang, L.E.2
Wei, Q.3
-
24
-
-
0027215240
-
Solution conformation of the (+)-cis-anti-[BP]dG adduct in a DNA duplex: intercalation of the covalently attached benzo[a]pyrenyl ring into the helix and displacement of the modified deoxyguanosine
-
Cosman M., de los Santos C., Fiala R., Hingerty B.E., Ibanez V., Luna E., et al. Solution conformation of the (+)-cis-anti-[BP]dG adduct in a DNA duplex: intercalation of the covalently attached benzo[a]pyrenyl ring into the helix and displacement of the modified deoxyguanosine. Biochemistry 1993, 32:4145-4155.
-
(1993)
Biochemistry
, vol.32
, pp. 4145-4155
-
-
Cosman, M.1
de los Santos, C.2
Fiala, R.3
Hingerty, B.E.4
Ibanez, V.5
Luna, E.6
-
25
-
-
0030657472
-
Base pair conformation-dependent excision of benzo[a]pyrene diol epoxide-guanine adducts by human nucleotide excision repair enzymes
-
Hess M.T., Gunz D., Luneva N., Geacintov N.E., Naegeli H. Base pair conformation-dependent excision of benzo[a]pyrene diol epoxide-guanine adducts by human nucleotide excision repair enzymes. Mol. Cell Biol. 1997, 17:7069-7076.
-
(1997)
Mol. Cell Biol.
, vol.17
, pp. 7069-7076
-
-
Hess, M.T.1
Gunz, D.2
Luneva, N.3
Geacintov, N.E.4
Naegeli, H.5
-
26
-
-
0032512426
-
Bending and circularization of site-specific and stereoisomeric carcinogen-DNA adducts
-
Xu R., Mao B., Amin S., Geacintov N.E. Bending and circularization of site-specific and stereoisomeric carcinogen-DNA adducts. Biochemistry 1998, 37:769-778.
-
(1998)
Biochemistry
, vol.37
, pp. 769-778
-
-
Xu, R.1
Mao, B.2
Amin, S.3
Geacintov, N.E.4
-
27
-
-
0020130969
-
Why does the electrophoretic mobility of DNA in gels vary with the length of the molecule?
-
Lerman L.S., Frisch H.L. Why does the electrophoretic mobility of DNA in gels vary with the length of the molecule?. Biopolymers 1982, 21:995-997.
-
(1982)
Biopolymers
, vol.21
, pp. 995-997
-
-
Lerman, L.S.1
Frisch, H.L.2
-
28
-
-
0020447056
-
Mobility of DNA in gel electrophoresis
-
Lumpkin O.J. Mobility of DNA in gel electrophoresis. Biopolymers 1982, 21:2315-2316.
-
(1982)
Biopolymers
, vol.21
, pp. 2315-2316
-
-
Lumpkin, O.J.1
-
29
-
-
0024121469
-
Calibration of DNA curvature and a unified description of sequence-directed bending
-
Koo H.S., Crothers D.M. Calibration of DNA curvature and a unified description of sequence-directed bending. Proc. Natl Acad. Sci. USA 1988, 85:1763-1767.
-
(1988)
Proc. Natl Acad. Sci. USA
, vol.85
, pp. 1763-1767
-
-
Koo, H.S.1
Crothers, D.M.2
-
30
-
-
0022418377
-
Sequence dependence of the curvature of DNA: a test of the phasing hypothesis
-
Hagerman P.J. Sequence dependence of the curvature of DNA: a test of the phasing hypothesis. Biochemistry 1985, 24:7033-7037.
-
(1985)
Biochemistry
, vol.24
, pp. 7033-7037
-
-
Hagerman, P.J.1
-
32
-
-
0022477409
-
DNA bending at adenine thymine tracts
-
Koo H.S., Wu H.M., Crothers D.M. DNA bending at adenine thymine tracts. Nature 1986, 320:501-506.
-
(1986)
Nature
, vol.320
, pp. 501-506
-
-
Koo, H.S.1
Wu, H.M.2
Crothers, D.M.3
-
33
-
-
0021268779
-
The locus of sequence-directed and protein-induced DNA bending
-
Wu H.M., Crothers D.M. The locus of sequence-directed and protein-induced DNA bending. Nature 1984, 308:509-513.
-
(1984)
Nature
, vol.308
, pp. 509-513
-
-
Wu, H.M.1
Crothers, D.M.2
-
34
-
-
0021022977
-
Energetics of DNA twisting. I. Relation between twist and cyclization probability
-
Shore D., Baldwin R.L. Energetics of DNA twisting. I. Relation between twist and cyclization probability. J. Mol. Biol. 1983, 170:957-981.
-
(1983)
J. Mol. Biol.
, vol.170
, pp. 957-981
-
-
Shore, D.1
Baldwin, R.L.2
-
35
-
-
0001106657
-
Curved DNA: design, synthesis, and circularization
-
Ulanovsky L., Bodner M., Trifonov E.N., Choder M. Curved DNA: design, synthesis, and circularization. Proc. Natl Acad. Sci. USA 1986, 83:862-866.
-
(1986)
Proc. Natl Acad. Sci. USA
, vol.83
, pp. 862-866
-
-
Ulanovsky, L.1
Bodner, M.2
Trifonov, E.N.3
Choder, M.4
-
36
-
-
0023179459
-
Direct evidence for DNA bending at the lambda replication origin
-
Zahn K., Blattner F.R. Direct evidence for DNA bending at the lambda replication origin. Science 1987, 236:416-422.
-
(1987)
Science
, vol.236
, pp. 416-422
-
-
Zahn, K.1
Blattner, F.R.2
-
37
-
-
0024599312
-
Definitions and nomenclature of nucleic acid structure components
-
Dickerson R.E. Definitions and nomenclature of nucleic acid structure components. Nucleic Acids Res. 1989, 17:1797-1803.
-
(1989)
Nucleic Acids Res.
, vol.17
, pp. 1797-1803
-
-
Dickerson, R.E.1
-
38
-
-
0020359857
-
Reversible bending and helix geometry in a B-DNA dodecamer: CGCGAATTBrCGCG
-
Fratini A.V., Kopka M.L., Drew H.R., Dickerson R.E. Reversible bending and helix geometry in a B-DNA dodecamer: CGCGAATTBrCGCG. J. Biol. Chem. 1982, 257:14686-14707.
-
(1982)
J. Biol. Chem.
, vol.257
, pp. 14686-14707
-
-
Fratini, A.V.1
Kopka, M.L.2
Drew, H.R.3
Dickerson, R.E.4
-
40
-
-
0032522139
-
DNA bending: the prevalence of kinkiness and the virtues of normality
-
Dickerson R.E. DNA bending: the prevalence of kinkiness and the virtues of normality. Nucleic Acids Res. 1998, 26:1906-1926.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 1906-1926
-
-
Dickerson, R.E.1
-
41
-
-
0028931709
-
B-DNA twisting correlates with base-pair morphology
-
Gorin A.A., Zhurkin V.B., Olson W.K. B-DNA twisting correlates with base-pair morphology. J. Mol. Biol. 1995, 247:34-48.
-
(1995)
J. Mol. Biol.
, vol.247
, pp. 34-48
-
-
Gorin, A.A.1
Zhurkin, V.B.2
Olson, W.K.3
-
42
-
-
77951072446
-
Bending and compaction of DNA by proteins
-
The Royal Society of Chemistry, Cambridge, UK, P.A. Rice, C.C. Correll (Eds.)
-
Johnson R.C., Stella S., Heiss J.K. Bending and compaction of DNA by proteins. Protein-Nucleic Acid Interactions 2008, 397. The Royal Society of Chemistry, Cambridge, UK. P.A. Rice, C.C. Correll (Eds.).
-
(2008)
Protein-Nucleic Acid Interactions
, pp. 397
-
-
Johnson, R.C.1
Stella, S.2
Heiss, J.K.3
-
43
-
-
38649139343
-
Stacking interactions and the twist of DNA
-
Cooper V.R., Thonhauser T., Puzder A., Schroder E., Lundqvist B.I., Langreth D.C. Stacking interactions and the twist of DNA. J. Am. Chem. Soc. 2008, 130:1304-1308.
-
(2008)
J. Am. Chem. Soc.
, vol.130
, pp. 1304-1308
-
-
Cooper, V.R.1
Thonhauser, T.2
Puzder, A.3
Schroder, E.4
Lundqvist, B.I.5
Langreth, D.C.6
-
44
-
-
0020385863
-
Mechanics of sequence-dependent stacking of bases in B-DNA
-
Calladine C.R. Mechanics of sequence-dependent stacking of bases in B-DNA. J. Mol. Biol. 1982, 161:343352.
-
(1982)
J. Mol. Biol.
, vol.161
, pp. 343352
-
-
Calladine, C.R.1
-
45
-
-
0032544507
-
Two distinct modes of protein-induced bending in DNA
-
el Hassan M.A., Calladine C.R. Two distinct modes of protein-induced bending in DNA. J. Mol. Biol. 1998, 282:331-343.
-
(1998)
J. Mol. Biol.
, vol.282
, pp. 331-343
-
-
el Hassan, M.A.1
Calladine, C.R.2
-
46
-
-
3142518260
-
Conformational characteristics of DNA: empirical classifications and a hypothesis for the conformational behaviour of dinucleotide steps
-
el Hassan M.A., Calladine G.R. Conformational characteristics of DNA: empirical classifications and a hypothesis for the conformational behaviour of dinucleotide steps. Phil. Trans. Soc. A 1997, 43-100.
-
(1997)
Phil. Trans. Soc. A
, pp. 43-100
-
-
el Hassan, M.A.1
Calladine, G.R.2
-
47
-
-
0036928374
-
Sequence-dependent dynamics of duplex DNA: the applicability of a dinucleotide model
-
Okonogi T.M., Alley S.C., Reese A.W., Hopkins P.B., Robinson B.H. Sequence-dependent dynamics of duplex DNA: the applicability of a dinucleotide model. Biophys. J. 2002, 83:3446-3459.
-
(2002)
Biophys. J.
, vol.83
, pp. 3446-3459
-
-
Okonogi, T.M.1
Alley, S.C.2
Reese, A.W.3
Hopkins, P.B.4
Robinson, B.H.5
-
48
-
-
0034614483
-
Sequence-dependent DNA structure: dinucleotide conformational maps
-
Packer M.J., Dauncey M.P., Hunter C.A. Sequence-dependent DNA structure: dinucleotide conformational maps. J. Mol. Biol. 2000, 295:71-83.
-
(2000)
J. Mol. Biol.
, vol.295
, pp. 71-83
-
-
Packer, M.J.1
Dauncey, M.P.2
Hunter, C.A.3
-
49
-
-
0037027367
-
Thermodynamic and structural factors in the removal of bulky DNA adducts by the nucleotide excision repair machinery
-
Geacintov N.E., Broyde S., Buterin T., Naegeli H., Wu M., Yan S., Patel D.J. Thermodynamic and structural factors in the removal of bulky DNA adducts by the nucleotide excision repair machinery. Biopolymers 2002, 65:202-210.
-
(2002)
Biopolymers
, vol.65
, pp. 202-210
-
-
Geacintov, N.E.1
Broyde, S.2
Buterin, T.3
Naegeli, H.4
Wu, M.5
Yan, S.6
Patel, D.J.7
-
50
-
-
0029840823
-
Recognition of DNA adducts by human nucleotide excision repair. Evidence for a thermodynamic probing mechanism
-
Gunz D., Hess M.T., Naegeli H. Recognition of DNA adducts by human nucleotide excision repair. Evidence for a thermodynamic probing mechanism. J. Biol. Chem. 1996, 271:25089-25098.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 25089-25098
-
-
Gunz, D.1
Hess, M.T.2
Naegeli, H.3
-
51
-
-
34948892722
-
Recognition of DNA damage by the Rad4 nucleotide excision repair protein
-
Min J.H., Pavletich N.P. Recognition of DNA damage by the Rad4 nucleotide excision repair protein. Nature 2007, 449:570-575.
-
(2007)
Nature
, vol.449
, pp. 570-575
-
-
Min, J.H.1
Pavletich, N.P.2
-
52
-
-
0028859115
-
Synthesis and characterization of covalent adducts derived from the binding of benzo[a]pyrene diol expoxide to a -GGG- sequence in a deoxyoligonucleotide
-
Mao B., Xu J., Li B., Margulis L.A., Smirnov S., Ya N.Q., et al. Synthesis and characterization of covalent adducts derived from the binding of benzo[a]pyrene diol expoxide to a -GGG- sequence in a deoxyoligonucleotide. Carcinogenesis 1995, 16:357-365.
-
(1995)
Carcinogenesis
, vol.16
, pp. 357-365
-
-
Mao, B.1
Xu, J.2
Li, B.3
Margulis, L.A.4
Smirnov, S.5
Ya, N.Q.6
-
53
-
-
0031924690
-
Role of hydrophobic effects in the reaction of a polynuclear aromatic diol epoxide with oligodeoxynucleotides in aqueous solutions
-
Pirogov N., Shafirovich V., Kolbanovskiy A., Solntsev K., Courtney S.A., Amin S., Geacintov N.E. Role of hydrophobic effects in the reaction of a polynuclear aromatic diol epoxide with oligodeoxynucleotides in aqueous solutions. Chem. Res. Toxicol. 1998, 11:381-388.
-
(1998)
Chem. Res. Toxicol.
, vol.11
, pp. 381-388
-
-
Pirogov, N.1
Shafirovich, V.2
Kolbanovskiy, A.3
Solntsev, K.4
Courtney, S.A.5
Amin, S.6
Geacintov, N.E.7
-
54
-
-
0032619108
-
Dual-incision assays for nucleotide excision repair using DNA with a lesion at a specific site
-
Shivji M.K., Moggs J.G., Kuraoka I., Wood R.D. Dual-incision assays for nucleotide excision repair using DNA with a lesion at a specific site. Methods Mol. Biol. 1999, 113:373-392.
-
(1999)
Methods Mol. Biol.
, vol.113
, pp. 373-392
-
-
Shivji, M.K.1
Moggs, J.G.2
Kuraoka, I.3
Wood, R.D.4
-
55
-
-
0027093114
-
Differences in unwinding of supercoiled DNA induced by the two enantiomers of anti-benzo[a]pyrene diol epoxide
-
Xu R., Birke S., Carberry S.E., Geacintov N.E., Swenberg C.E., Harvey R.G. Differences in unwinding of supercoiled DNA induced by the two enantiomers of anti-benzo[a]pyrene diol epoxide. Nucleic Acids Res. 1992, 20:6167-6176.
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 6167-6176
-
-
Xu, R.1
Birke, S.2
Carberry, S.E.3
Geacintov, N.E.4
Swenberg, C.E.5
Harvey, R.G.6
-
56
-
-
9244260409
-
-
University of California, San Francisco, CA
-
Case D.A., Darden T.A., Cheatham, Simmerling C.L., Wang J., Duke R.E., et al. AMBER 8 2004, University of California, San Francisco, CA.
-
(2004)
AMBER 8
-
-
Case, D.A.1
Darden, T.A.2
Cheatham3
Simmerling, C.L.4
Wang, J.5
Duke, R.E.6
-
57
-
-
0004195760
-
-
University of California, San Francisco, CA
-
Case D.A., Pearlman D.A., Caldwell J.W., Cheatham, Wang J., Ross W.S., et al. AMBER 7 2002, University of California, San Francisco, CA.
-
(2002)
AMBER 7
-
-
Case, D.A.1
Pearlman, D.A.2
Caldwell, J.W.3
Cheatham4
Wang, J.5
Ross, W.S.6
-
59
-
-
0024556774
-
Conformational and helicoidal analysis of 30 ps of molecular dynamics on the d(CGCGAATTCGCG) double helix: ″ curves″ , dials and windows
-
Ravishanker G., Swaminathan S., Beveridge D.L., Lavery R., Sklenar H. Conformational and helicoidal analysis of 30 ps of molecular dynamics on the d(CGCGAATTCGCG) double helix: ″ curves″ , dials and windows. J. Biomol. Struct. Dyn. 1989, 6:669-699.
-
(1989)
J. Biomol. Struct. Dyn.
, vol.6
, pp. 669-699
-
-
Ravishanker, G.1
Swaminathan, S.2
Beveridge, D.L.3
Lavery, R.4
Sklenar, H.5
-
61
-
-
0003023614
-
Moil-View - a program for visualization of structure and dynamics of biomolecules and STO - a program for computing stochastic paths
-
Kluwer, The Netherlands, A. Pullman, J. Jortner (Eds.)
-
Simmerling C., Elber R., Zhang J. Moil-View - a program for visualization of structure and dynamics of biomolecules and STO - a program for computing stochastic paths. Modelling of Biomolecular Structure and Mechanisms 1995, 241-265. Kluwer, The Netherlands. A. Pullman, J. Jortner (Eds.).
-
(1995)
Modelling of Biomolecular Structure and Mechanisms
, pp. 241-265
-
-
Simmerling, C.1
Elber, R.2
Zhang, J.3
-
62
-
-
0003803285
-
Nucleic acid structures from diffraction methods
-
University Science Books, Sausalito, CA
-
Bloomfield V.A., Crothers D.M., Tinoco J.I. Nucleic acid structures from diffraction methods. Nucleic Acids: Structures, Properties and Functions 2000, 90-96. University Science Books, Sausalito, CA.
-
(2000)
Nucleic Acids: Structures, Properties and Functions
, pp. 90-96
-
-
Bloomfield, V.A.1
Crothers, D.M.2
Tinoco, J.I.3
|