Host-derived suppression of nematode reproductive and fitness genes decreases fecundity of Heterodera glycines Ichinohe

Planta

Volumn 232, Issue 3, 2010, Pages 775-785

  Li, Jiarui ^a   Todd, Timothy C ^a   Oakley, Tom R ^a   Lee, Junghoon ^a   Trick, Harold N ^a  

^a KANSAS STATE UNIVERSITY   (United States)

Author keywords

Agrobacterium rhizogenes; Composite plants; Glycine max; RNA interference; Soybean

Indexed keywords

PRIMER DNA;

ANIMAL; ARTICLE; FERTILITY; GENETICS; NEMATODE; NORTHERN BLOTTING; NUCLEOTIDE SEQUENCE; PARASITOLOGY; PHYSIOLOGY; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SOUTHERN BLOTTING; SOYBEAN; TRANSGENIC PLANT;

ANIMALS; BASE SEQUENCE; BLOTTING, NORTHERN; BLOTTING, SOUTHERN; DNA PRIMERS; FERTILITY; NEMATODA; PLANTS, GENETICALLY MODIFIED; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; SOYBEANS;

AGROBACTERIUM RHIZOGENES; GLYCINE MAX; HETERODERA GLYCINES; NEMATODA;

EID: 77954539147     PISSN: 00320935     EISSN: 14322048     Source Type: Journal    
DOI: 10.1007/s00425-010-1209-7     Document Type: Article

References (39)

1. Alkharouf NW, Klink VP, Matthews BF (2007) Identification of Heterodera glycines (soybean cyst nematode [SCN]) cDNA sequences with high identity to those of Caenorhabditis elegans having lethal mutant or RNAi phenotypes. Exp Parasitol 115: 247-258.
2. Bakhetia M, Charlton WL, Atkinson HJ, McPherson MJ (2005) RNA interference of dual oxidase in the plant nematode Meloidogyne incognita. Mol Plant Microbe Interact 18: 1099-1106.
3. Bekal S, Niblack TL, Lambert KN (2003) A chorismate mutase from the soybean cyst nematode Heterodera glycines shows polymorphisms that correlate with virulence. Mol Plant Microbe Interact 16: 439-446.
4. Bernstein E, Caudy AA, Hammond SM, Hannon GJ (2001) Role for a bidentate ribonuclease in the initiation step of RNA interference. Nature 409: 363-366.
5. Chen H, Nelson RS, Sherwood JL (1994) Enhanced recovery of transformants of Agrobacterium tumefaciens after freeze-thaw transformation and drug selection. Biotechniques 16: 664-670.
6. Collier R, Fuchs B, Walter N, Lutke WK, Taylor CG (2005) Ex vitro chimeric plants: an inexpensive, rapid method for root biology. Plant J 43: 449-457.
7. Delloporta SL, Wood J, Hicks JB (1983) A plant DNA minipreparation: version II. Plant Mol Biol Rep 4: 19.
8. Dong K, Barker KR, Opperman CH (1997) Genetics of soybean Heterodera glycines interactions. J Nematol 29: 509-522.
9. Elbashir SM, Martinez J, Patkaniowska A, Lendeckel W, Tuschl T (2001) Functional anatomy of siRNAs for mediating efficient RNAi in Drosophila melanogaster embryo lysate. EMBO J 20: 6877-6888.
10. Fire A, Xu S, Montgomery MK, Kostas SA, Driver SE, Mello CC (1998) Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature 391: 806-811.
11. Fraser AG, Kamath RS, Zipperlen P, Martinez-Campos M, Sohrmann M, Ahringer JA (2000) Functional genomic analysis of C elegans chromosome I by systematic RNA interference. Nature 408: 325-330.
12. Hansen J, Jorgensen JE, Stougaard J, Marcher KA (1989) Hairy roots-a short cut to transgenic root nodules. Plant Cell Rep 8: 12-15.
13. Hershman DE, Heinz RD, Kennedy BS (2008) Soybean cyst nematode, Heterodera glycines, populations adapting to resistant soybean cultivars in Kentucky. Plant Dis 92: 1475.
14. Huang G, Allen R, Davis EL, Baum TJ, Hussey RS (2006) Engineering broad root-knot resistance in transgenic plants by RNAi silencing of a conserved and essential root-knot nematode parasitism gene. Proc Natl Acad Sci USA 103: 14302-14306.
15. Ithal N, Recknor J, Nettleton D, Hearne L, Maier T, Baum TJ, Mitchum MG (2007) Parallel genome-wide expression profiling of host and pathogen during soybean cyst nematode infection of soybean. Mol Plant Microbe Interact 20(3): 293-305.
16. Kamath RS, Fraser AG, Dong Y, Poulin G, Durbin R, Gotta M, Kanapin A, Le Bot N, Moreno S, Sohrmann M, Welchman DP, Zipperlen P, Ahringer J (2003) Systematic functional analysis of the Caenorhabditis elegans genome using RNAi. Nature 421: 231-237.
17. Kirchhausen T (2000) Three ways to make a vesicle. Nat Rev Mol Cell Biol 1: 187-198.
18. Klink VP, Overall CC, Alkharouf NW, MacDonald MH, Matthews BF (2007) Laser capture microdissection (LCM) and comparative microarray expression analysis of syncytial cells isolated from incompatible and compatible soybean (Glycine max) roots infected by the soybean cyst nematode (Heterodera glycines). Planta 226: 1389-1409.
19. Klink VP, Hosseini P, MacDonald MH, Alkharouf NW, Matthews BF (2009a) Population-specific gene expression in the plant pathogenic nematode Heterodera glycines exists prior to infection and during the onset of a resistant or susceptible reaction in the roots of the Glycine max genotype Peking. BMC Genomics 10: 111. doi: 10. 1186/1471-2164-10-111.
20. Klink VP, Hosseini P, Matsye P, Alkharouf NW, Matthews BF (2009b) A gene expression analysis of syncytia laser microdissected from the roots of the Glycine max (soybean) genotype PI 548402 (Peking) undergoing a resistant reaction after infection by Heterodera glycines (soybean cyst nematode). Plant Mol Biol 71: 525-567.
21. Klink VP, Kim KH, Martins V, Macdonald MH, Beard HS, Alkharouf NW, Lee SK, Park SC, Matthews BF (2009c) A correlation between host-mediated expression of parasite genes as tandem inverted repeats and abrogation of development of female Heterodera glycines cyst formation during infection of Glycine max. Planta 230: 53-71.
22. Li JR, Todd TC, Trick HN (2010) Rapid in planta evaluation of root expressed transgenes in chimeric soybean plants. Plant Cell Rep 29: 113-123.
23. Liu QH, Rand TA, Kalidas S, Du F, Kim HE, Smith DP, Wang XD (2003) R2D2, a bridge between the initiation and effector steps of the Drosophila RNAi pathway. Science 26: 1921-1925.
24. Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method. Methods 25: 402-408.
25. Maeda I, Kohara Y, Yamamoto M, Sugimoto A (2001) Large-scale analysis of gene function in Caenorhabditis elegans by high-throughput RNAi. Curr Biol 11: 171-176.
26. Mahalingam R, Wang G, Knap HT (1999) Polygalacturonase and polygalacturonase inhibitor protein: gene isolation and transcription in Glycine max-Heterodera glycines interactions. Mol Plant Microbe Interact 12: 490-498.
27. Miki D, Shimamoto K (2004) Simple RNAi vectors for stable and transient suppression of gene function in rice. Plant Cell Physiol 45: 490-495.
28. Mitchum MG, Wrather JA, Heinz RD, Shannon JG, Danekas G (2007) Variability in distribution and virulence phenotypes of Heterodera glycines in Missouri during 2005. Plant Dis 91: 1473-1476.
29. Murray MG, Thompson WF (1980) Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res 8: 4321-4325.
30. Nickel W, Brügger B, Wieland FT (2002) Vesicular transport: the core machinery of COPI recruitment and budding. J Cell Sci 115: 3235-3240.
31. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: a laboratory manual, 2nd edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
32. Schmitt DP, Shannon G (1992) Differentiating soybean responses to Heterodera glycines races. Crop Sci 32: 275-277.
33. Simmer F, Moorman C, van der Linden AM, Kuijk E, van den Berghe PVE, Kamath FS, Fraser AG, Ahringer J, Plasterk RHA (2003) Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals novel gene functions. PLoS Biol 1: 77-84.
34. Sindhu AS, Maier TR, Mitchum MG, Hussey RS, Davis EL, Baum TJ (2009) Effective and specific in planta RNAi in cyst nematodes: expression interference of four parasitism genes reduces parasitic success. J Exp Bot 60: 315-324.
35. Sonnichsen B, Koski LB, Walsh A, Marschall P, Neumann B, Brehm M, Alleaume AM, Artelt J, Bettencourt P, Cassin E, Hewitson M, Holz C, Khan M, Lazik S, Martin C, Nitzsche B, Ruer M, Stamford J, Winzi M, Heinkel R, Roder M, Finell J, Hantsch H, Jones SJ, Jones M, Piano F, Gunsalus KC, Oegema K, Gonczy P, Coulson A, Hyman AA, Echeverri CJ (2005) Full-genome RNAi profiling of early embryogenesis in Caenorhabditis elegans. Nature 434: 462-469.
36. Steeves RM, Todd TC, Essig JS, Trick HN (2006) Transgenic soybeans expressing siRNAs specific to a major sperm protein gene suppress Heterodera glycines reproduction. Funct Plant Biol 33: 991-999.
37. Urwin PE, Lilley CJ, Atkinson HJ (2002) Ingestion of double stranded RNA by pre-parasitic juvenile cyst nematodes leads to RNA interference. Mol Plant Microbe Interact 15: 747-752.
38. Wrather JA, Koenning SR (2006) Estimates of disease effects on soybean yields in the United States 2003-2005. J Nematol 38: 173-180.
39. Yadav BC, Veluthambi K, Subramaniam K (2006) Host-generated double stranded RNA induces RNAi in plant-parasitic nematodes and protects the host from infection. Mol Biochem Parasitol 148: 219-222.