메뉴 건너뛰기




Volumn 232, Issue 3, 2010, Pages 649-662

Biochemical characterization of the small ubiquitin-like modifiers of Chlamydomonas reinhardtii

Author keywords

Chlamydomonas reinhardtii; Di glycine motif; Small ubiquitin like modifier (SUMO); SUMO 1 sentrin SMT3 specific peptidase 1 (SENP1); SUMO activating enzyme (SAE); Ubiquitin conjugating enzyme 9 (Ubc9)

Indexed keywords

PLANT RNA; PRIMER DNA; SUMO PROTEIN; UBIQUITIN;

EID: 77954534761     PISSN: 00320935     EISSN: 14322048     Source Type: Journal    
DOI: 10.1007/s00425-010-1204-z     Document Type: Article
Times cited : (7)

References (50)
  • 1
    • 0036177128 scopus 로고    scopus 로고
    • Structural basis for E2-mediated SUMO conjugation revealed by a complex between ubiquitin-conjugating enzyme Ubc9 and RanGAP1
    • Bernier-Villamor V, Sampson DA, Matunis MJ, Lima CD (2002) Structural basis for E2-mediated SUMO conjugation revealed by a complex between ubiquitin-conjugating enzyme Ubc9 and RanGAP1. Cell 108: 345-356.
    • (2002) Cell , vol.108 , pp. 345-356
    • Bernier-Villamor, V.1    Sampson, D.A.2    Matunis, M.J.3    Lima, C.D.4
  • 2
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72: 248-254.
    • (1976) Anal Biochem , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 3
    • 34248176792 scopus 로고    scopus 로고
    • Structure and analysis of a complex between SUMO and Ubc9 illustrates features of a conserved E2-Ubl interaction
    • Capili AD, Lima CD (2007) Structure and analysis of a complex between SUMO and Ubc9 illustrates features of a conserved E2-Ubl interaction. J Mol Biol 369: 608-618.
    • (2007) J Mol Biol , vol.369 , pp. 608-618
    • Capili, A.D.1    Lima, C.D.2
  • 4
    • 33748750531 scopus 로고    scopus 로고
    • Evolution of a signalling system that incorporates both redundancy and diversity: Arabidopsis SUMOylation
    • Chosed R, Mukherjee S, Lois LM, Orth K (2006) Evolution of a signalling system that incorporates both redundancy and diversity: Arabidopsis SUMOylation. Biochem J 398: 521-529.
    • (2006) Biochem J , vol.398 , pp. 521-529
    • Chosed, R.1    Mukherjee, S.2    Lois, L.M.3    Orth, K.4
  • 5
    • 0031589972 scopus 로고    scopus 로고
    • Identification and characterization of the SMT3 cDNA and gene from nematode Caenorhabditis elegans
    • Choudhury BK, Li SS (1997) Identification and characterization of the SMT3 cDNA and gene from nematode Caenorhabditis elegans. Biochem Biophys Res Commun 234: 788-791.
    • (1997) Biochem Biophys Res Commun , vol.234 , pp. 788-791
    • Choudhury, B.K.1    Li, S.S.2
  • 6
    • 33748758712 scopus 로고    scopus 로고
    • SUMO-conjugating and SUMO-deconjugating enzymes from Arabidopsis
    • Colby T, Matthai A, Boeckelmann A, Stuible HP (2006) SUMO-conjugating and SUMO-deconjugating enzymes from Arabidopsis. Plant Physiol 142: 318-332.
    • (2006) Plant Physiol , vol.142 , pp. 318-332
    • Colby, T.1    Matthai, A.2    Boeckelmann, A.3    Stuible, H.P.4
  • 7
    • 9644278013 scopus 로고    scopus 로고
    • SUMO protein modification
    • Dohmen RJ (2004) SUMO protein modification. Biochim Biophys Acta 1695: 113-131.
    • (2004) Biochim Biophys Acta , vol.1695 , pp. 113-131
    • Dohmen, R.J.1
  • 8
    • 38749124386 scopus 로고    scopus 로고
    • Activity profiling of human deSUMOylating enzymes (SENPs) with synthetic substrates suggests an unexpected specificity of two newly characterized members of the family
    • Drag M, Mikolajczyk J, Krishnakumar IM, Huang Z, Salvesen GS (2008) Activity profiling of human deSUMOylating enzymes (SENPs) with synthetic substrates suggests an unexpected specificity of two newly characterized members of the family. Biochem J 409: 461-469.
    • (2008) Biochem J , vol.409 , pp. 461-469
    • Drag, M.1    Mikolajczyk, J.2    Krishnakumar, I.M.3    Huang, Z.4    Salvesen, G.S.5
  • 10
    • 33744917849 scopus 로고    scopus 로고
    • Characterization of a family of nucleolar SUMO-specific proteases with preference for SUMO-2 or SUMO-3
    • Gong L, Yeh ET (2006) Characterization of a family of nucleolar SUMO-specific proteases with preference for SUMO-2 or SUMO-3. J Biol Chem 281: 15869-15877.
    • (2006) J Biol Chem , vol.281 , pp. 15869-15877
    • Gong, L.1    Yeh, E.T.2
  • 12
    • 34548483908 scopus 로고    scopus 로고
    • SUMO-specific proteases: A twist in the tail
    • Hay RT (2007) SUMO-specific proteases: a twist in the tail. Trends Cell Biol 17: 370-376.
    • (2007) Trends Cell Biol , vol.17 , pp. 370-376
    • Hay, R.T.1
  • 13
    • 0034253588 scopus 로고    scopus 로고
    • Evolution and function of ubiquitin-like protein-conjugation systems
    • Hochstrasser M (2000) Evolution and function of ubiquitin-like protein-conjugation systems. Nat Cell Biol 2: E153-E157.
    • (2000) Nat Cell Biol , vol.2
    • Hochstrasser, M.1
  • 16
    • 3943099375 scopus 로고    scopus 로고
    • Protein modification by SUMO
    • Johnson ES (2004) Protein modification by SUMO. Annu Rev Biochem 73: 355-382.
    • (2004) Annu Rev Biochem , vol.73 , pp. 355-382
    • Johnson, E.S.1
  • 17
    • 0030794729 scopus 로고    scopus 로고
    • The ubiquitin-like protein Smt3p is activated for conjugation to other proteins by an Aos1p/Uba2p heterodimer
    • Johnson ES, Schwienhorst I, Dohmen RJ, Blobel G (1997) The ubiquitin-like protein Smt3p is activated for conjugation to other proteins by an Aos1p/Uba2p heterodimer. EMBO J 16: 5509-5519.
    • (1997) EMBO J , vol.16 , pp. 5509-5519
    • Johnson, E.S.1    Schwienhorst, I.2    Dohmen, R.J.3    Blobel, G.4
  • 18
    • 33749346301 scopus 로고    scopus 로고
    • Modification of proteins by ubiquitin and ubiquitin-like proteins
    • Kerscher O, Felberbaum R, Hochstrasser M (2006) Modification of proteins by ubiquitin and ubiquitin-like proteins. Annu Rev Cell Dev Biol 22: 159-180.
    • (2006) Annu Rev Cell Dev Biol , vol.22 , pp. 159-180
    • Kerscher, O.1    Felberbaum, R.2    Hochstrasser, M.3
  • 19
    • 34250013122 scopus 로고    scopus 로고
    • Noncovalent interaction between Ubc9 and SUMO promotes SUMO chain formation
    • Knipscheer P, van Dijk WJ, Olsen JV, Mann M, Sixma TK (2007) Noncovalent interaction between Ubc9 and SUMO promotes SUMO chain formation. EMBO J 26: 2797-2807.
    • (2007) EMBO J , vol.26 , pp. 2797-2807
    • Knipscheer, P.1    van Dijk, W.J.2    Olsen, J.V.3    Mann, M.4    Sixma, T.K.5
  • 20
    • 0037470238 scopus 로고    scopus 로고
    • The small ubiquitin-like modifier (SUMO) protein modification system in Arabidopsis. Accumulation of SUMO1 and -2 conjugates is increased by stress
    • Kurepa J, Walker JM, Smalle J, Gosink MM, Davis SJ, Durham TL, Sung DY, Vierstra RD (2003) The small ubiquitin-like modifier (SUMO) protein modification system in Arabidopsis. Accumulation of SUMO1 and -2 conjugates is increased by stress. J Biol Chem 278: 6862-6872.
    • (2003) J Biol Chem , vol.278 , pp. 6862-6872
    • Kurepa, J.1    Walker, J.M.2    Smalle, J.3    Gosink, M.M.4    Davis, S.J.5    Durham, T.L.6    Sung, D.Y.7    Vierstra, R.D.8
  • 22
    • 0033580444 scopus 로고    scopus 로고
    • A new protease required for cell-cycle progression in yeast
    • Li SJ, Hochstrasser M (1999) A new protease required for cell-cycle progression in yeast. Nature 398: 246-251.
    • (1999) Nature , vol.398 , pp. 246-251
    • Li, S.J.1    Hochstrasser, M.2
  • 23
    • 0034018312 scopus 로고    scopus 로고
    • The yeast ULP2 (SMT4) gene encodes a novel protease specific for the ubiquitin-like Smt3 protein
    • Li SJ, Hochstrasser M (2000) The yeast ULP2 (SMT4) gene encodes a novel protease specific for the ubiquitin-like Smt3 protein. Mol Cell Biol 20: 2367-2377.
    • (2000) Mol Cell Biol , vol.20 , pp. 2367-2377
    • Li, S.J.1    Hochstrasser, M.2
  • 24
    • 57649138450 scopus 로고    scopus 로고
    • Structure of the human SENP7 catalytic domain and poly-SUMO deconjugation activities for SENP6 and SENP7
    • Lima CD, Reverter D (2008) Structure of the human SENP7 catalytic domain and poly-SUMO deconjugation activities for SENP6 and SENP7. J Biol Chem 283: 32045-32055.
    • (2008) J Biol Chem , vol.283 , pp. 32045-32055
    • Lima, C.D.1    Reverter, D.2
  • 25
    • 0037781038 scopus 로고    scopus 로고
    • Small ubiquitin-like modifier modulates abscisic acid signaling in Arabidopsis
    • Lois LM, Lima CD, Chua NH (2003) Small ubiquitin-like modifier modulates abscisic acid signaling in Arabidopsis. Plant Cell 15: 1347-1359.
    • (2003) Plant Cell , vol.15 , pp. 1347-1359
    • Lois, L.M.1    Lima, C.D.2    Chua, N.H.3
  • 26
    • 0034731301 scopus 로고    scopus 로고
    • Identification and characterization of a SUMO-1 conjugation system that modifies neuronal calcium/calmodulin-dependent protein kinase II in Drosophila melanogaster
    • Long X, Griffith LC (2000) Identification and characterization of a SUMO-1 conjugation system that modifies neuronal calcium/calmodulin-dependent protein kinase II in Drosophila melanogaster. J Biol Chem 275: 40765-40776.
    • (2000) J Biol Chem , vol.275 , pp. 40765-40776
    • Long, X.1    Griffith, L.C.2
  • 27
    • 0030455748 scopus 로고    scopus 로고
    • A novel ubiquitin-like modification modulates the partitioning of the Ran-GTPase-activating protein RanGAP1 between the cytosol and the nuclear pore complex
    • Matunis MJ, Coutavas E, Blobel G (1996) A novel ubiquitin-like modification modulates the partitioning of the Ran-GTPase-activating protein RanGAP1 between the cytosol and the nuclear pore complex. J Cell Biol 135: 1457-1470.
    • (1996) J Cell Biol , vol.135 , pp. 1457-1470
    • Matunis, M.J.1    Coutavas, E.2    Blobel, G.3
  • 29
    • 34548848530 scopus 로고    scopus 로고
    • Small ubiquitin-related modifier (SUMO)-specific proteases: Profiling the specificities and activities of human SENPs
    • Mikolajczyk J, Drag M, Bekes M, Cao JT, Ronai Z, Salvesen GS (2007) Small ubiquitin-related modifier (SUMO)-specific proteases: profiling the specificities and activities of human SENPs. J Biol Chem 282: 26217-26224.
    • (2007) J Biol Chem , vol.282 , pp. 26217-26224
    • Mikolajczyk, J.1    Drag, M.2    Bekes, M.3    Cao, J.T.4    Ronai, Z.5    Salvesen, G.S.6
  • 31
    • 0033638223 scopus 로고    scopus 로고
    • Ulp1-SUMO crystal structure and genetic analysis reveal conserved interactions and a regulatory element essential for cell growth in yeast
    • Mossessova E, Lima CD (2000) Ulp1-SUMO crystal structure and genetic analysis reveal conserved interactions and a regulatory element essential for cell growth in yeast. Mol Cell 5: 865-876.
    • (2000) Mol Cell , vol.5 , pp. 865-876
    • Mossessova, E.1    Lima, C.D.2
  • 32
    • 34249880519 scopus 로고    scopus 로고
    • Modification in reverse: The SUMO proteases
    • Mukhopadhyay D, Dasso M (2007) Modification in reverse: the SUMO proteases. Trends Biochem Sci 32: 286-295.
    • (2007) Trends Biochem Sci , vol.32 , pp. 286-295
    • Mukhopadhyay, D.1    Dasso, M.2
  • 33
    • 0142028822 scopus 로고    scopus 로고
    • A nuclear protease required for flowering-time regulation in Arabidopsis reduces the abundance of SMALL UBIQUITIN-RELATED MODIFIER conjugates
    • Murtas G, Reeves PH, Fu YF, Bancroft I, Dean C, Coupland G (2003) A nuclear protease required for flowering-time regulation in Arabidopsis reduces the abundance of SMALL UBIQUITIN-RELATED MODIFIER conjugates. Plant Cell 15: 2308-2319.
    • (2003) Plant Cell , vol.15 , pp. 2308-2319
    • Murtas, G.1    Reeves, P.H.2    Fu, Y.F.3    Bancroft, I.4    Dean, C.5    Coupland, G.6
  • 35
    • 77249138804 scopus 로고    scopus 로고
    • Active site remodelling accompanies thioester bond formation in the SUMO E1
    • Olsen SK, Capili AD, Lu X, Tan DS, Lima CD (2010) Active site remodelling accompanies thioester bond formation in the SUMO E1. Nature 463: 906-912.
    • (2010) Nature , vol.463 , pp. 906-912
    • Olsen, S.K.1    Capili, A.D.2    Lu, X.3    Tan, D.S.4    Lima, C.D.5
  • 36
    • 4143083663 scopus 로고    scopus 로고
    • A basis for SUMO protease specificity provided by analysis of human Senp2 and a Senp2-SUMO complex
    • Reverter D, Lima CD (2004) A basis for SUMO protease specificity provided by analysis of human Senp2 and a Senp2-SUMO complex. Structure 12: 1519-1531.
    • (2004) Structure , vol.12 , pp. 1519-1531
    • Reverter, D.1    Lima, C.D.2
  • 37
    • 2442574862 scopus 로고    scopus 로고
    • Characterization of the Xanthomonas AvrXv4 effector, a SUMO protease translocated into plant cells
    • Roden J, Eardley L, Hotson A, Cao Y, Mudgett MB (2004) Characterization of the Xanthomonas AvrXv4 effector, a SUMO protease translocated into plant cells. Mol Plant Microbe Interact 17: 633-643.
    • (2004) Mol Plant Microbe Interact , vol.17 , pp. 633-643
    • Roden, J.1    Eardley, L.2    Hotson, A.3    Cao, Y.4    Mudgett, M.B.5
  • 38
    • 0034054669 scopus 로고    scopus 로고
    • Functional heterogeneity of small ubiquitin-related protein modifiers SUMO-1 versus SUMO-2/3
    • Saitoh H, Hinchey J (2000) Functional heterogeneity of small ubiquitin-related protein modifiers SUMO-1 versus SUMO-2/3. J Biol Chem 275: 6252-6258.
    • (2000) J Biol Chem , vol.275 , pp. 6252-6258
    • Saitoh, H.1    Hinchey, J.2
  • 39
    • 0035877693 scopus 로고    scopus 로고
    • The small ubiquitin-like modifier-1 (SUMO-1) consensus sequence mediates Ubc9 binding and is essential for SUMO-1 modification
    • Sampson DA, Wang M, Matunis MJ (2001) The small ubiquitin-like modifier-1 (SUMO-1) consensus sequence mediates Ubc9 binding and is essential for SUMO-1 modification. J Biol Chem 276: 21664-21669.
    • (2001) J Biol Chem , vol.276 , pp. 21664-21669
    • Sampson, D.A.1    Wang, M.2    Matunis, M.J.3
  • 40
    • 33746038148 scopus 로고    scopus 로고
    • The structure of SENP1-SUMO-2 complex suggests a structural basis for discrimination between SUMO paralogues during processing
    • Shen LN, Dong C, Liu H, Naismith JH, Hay RT (2006) The structure of SENP1-SUMO-2 complex suggests a structural basis for discrimination between SUMO paralogues during processing. Biochem J 397: 279-288.
    • (2006) Biochem J , vol.397 , pp. 279-288
    • Shen, L.N.1    Dong, C.2    Liu, H.3    Naismith, J.H.4    Hay, R.T.5
  • 41
    • 3242665372 scopus 로고    scopus 로고
    • The ubiquitin 26S proteasome proteolytic pathway
    • Smalle J, Vierstra RD (2004) The ubiquitin 26S proteasome proteolytic pathway. Annu Rev Plant Biol 55: 555-590.
    • (2004) Annu Rev Plant Biol , vol.55 , pp. 555-590
    • Smalle, J.1    Vierstra, R.D.2
  • 43
    • 0033661793 scopus 로고    scopus 로고
    • Yeast Ulp1, an Smt3-specific protease, associates with nucleoporins
    • Takahashi Y, Mizoi J, Toh EA, Kikuchi Y (2000) Yeast Ulp1, an Smt3-specific protease, associates with nucleoporins. J Biochem 128: 723-725.
    • (2000) J Biochem , vol.128 , pp. 723-725
    • Takahashi, Y.1    Mizoi, J.2    Toh, E.A.3    Kikuchi, Y.4
  • 44
    • 0033508431 scopus 로고    scopus 로고
    • Characterization of a fission yeast SUMO-1 homologue, pmt3p, required for multiple nuclear events, including the control of telomere length and chromosome segregation
    • Tanaka K, Nishide J, Okazaki K, Kato H, Niwa O, Nakagawa T, Matsuda H, Kawamukai M, Murakami Y (1999) Characterization of a fission yeast SUMO-1 homologue, pmt3p, required for multiple nuclear events, including the control of telomere length and chromosome segregation. Mol Cell Biol 19: 8660-8672.
    • (1999) Mol Cell Biol , vol.19 , pp. 8660-8672
    • Tanaka, K.1    Nishide, J.2    Okazaki, K.3    Kato, H.4    Niwa, O.5    Nakagawa, T.6    Matsuda, H.7    Kawamukai, M.8    Murakami, Y.9
  • 46
    • 3042712867 scopus 로고    scopus 로고
    • Overproduction of eukaryotic SUMO-1- and SUMO-2-conjugated proteins in Escherichia coli
    • Uchimura Y, Nakamura M, Sugasawa K, Nakao M, Saitoh H (2004) Overproduction of eukaryotic SUMO-1- and SUMO-2-conjugated proteins in Escherichia coli. Anal Biochem 331: 204-206.
    • (2004) Anal Biochem , vol.331 , pp. 204-206
    • Uchimura, Y.1    Nakamura, M.2    Sugasawa, K.3    Nakao, M.4    Saitoh, H.5
  • 47
    • 39649117348 scopus 로고    scopus 로고
    • SUMO4 and its role in type 1 diabetes pathogenesis
    • Wang CY, She JX (2008) SUMO4 and its role in type 1 diabetes pathogenesis. Diabetes Metab Res Rev 24: 93-102.
    • (2008) Diabetes Metab Res Rev , vol.24 , pp. 93-102
    • Wang, C.Y.1    She, J.X.2
  • 48
    • 52049097573 scopus 로고    scopus 로고
    • The small ubiquitin-like modifier (SUMO) and SUMO-conjugating system of Chlamydomonas reinhardtii
    • Wang Y, Ladunga I, Miller AR, Horken KM, Plucinak T, Weeks DP, Bailey CP (2008) The small ubiquitin-like modifier (SUMO) and SUMO-conjugating system of Chlamydomonas reinhardtii. Genetics 179: 177-192.
    • (2008) Genetics , vol.179 , pp. 177-192
    • Wang, Y.1    Ladunga, I.2    Miller, A.R.3    Horken, K.M.4    Plucinak, T.5    Weeks, D.P.6    Bailey, C.P.7
  • 49
    • 23144449208 scopus 로고    scopus 로고
    • Ubiquitin and ubiquitin-like proteins as multifunctional signals
    • Welchman RL, Gordon C, Mayer RJ (2005) Ubiquitin and ubiquitin-like proteins as multifunctional signals. Nat Rev Mol Cell Biol 6: 599-609.
    • (2005) Nat Rev Mol Cell Biol , vol.6 , pp. 599-609
    • Welchman, R.L.1    Gordon, C.2    Mayer, R.J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.