-
1
-
-
58149178540
-
Long-distance movement of Aspergillus nidulans early endosomes on microtubule tracks
-
Abenza, J. F., A. Pantazopoulou, J. M. Rodriguez, A. Galindo, and M. A. Peñalva. 2009. Long-distance movement of Aspergillus nidulans early endosomes on microtubule tracks. Traffic 10:57-75.
-
(2009)
Traffic
, vol.10
, pp. 57-75
-
-
Abenza, J.F.1
Pantazopoulou, A.2
Rodriguez, J.M.3
Galindo, A.4
Peñalva, M.A.5
-
2
-
-
41949120307
-
A trispecies Aspergillus microarray: Comparative transcriptomics of three Aspergillus species
-
Andersen, M. R., W. Vongsangnak, G. Panagiotou, M. P. Salazar, L. Lehmann, and J. Nielsen. 2008. A trispecies Aspergillus microarray: comparative transcriptomics of three Aspergillus species. Proc. Natl. Acad. Sci. U. S. A. 105:4387-4392.
-
(2008)
Proc. Natl. Acad. Sci. U. S. A.
, vol.105
, pp. 4387-4392
-
-
Andersen, M.R.1
Vongsangnak, W.2
Panagiotou, G.3
Salazar, M.P.4
Lehmann, L.5
Nielsen, J.6
-
4
-
-
33744969296
-
Synaptopodin orchestrates actin organization and cell motility via regulation of RhoA signalling
-
Asanuma, K., E. Yanagida-Asanuma, C. Faul, Y. Tomino, K. Kim, and P. Mundel. 2006. Synaptopodin orchestrates actin organization and cell motility via regulation of RhoA signalling. Nat. Cell Biol. 8:485-491.
-
(2006)
Nat. Cell Biol.
, vol.8
, pp. 485-491
-
-
Asanuma, K.1
Yanagida-Asanuma, E.2
Faul, C.3
Tomino, Y.4
Kim, K.5
Mundel, P.6
-
5
-
-
33749519986
-
Aspergillus niger genomics: Past, present and into the future
-
Baker, S. E. 2006. Aspergillus niger genomics: past, present and into the future. Med. Mycol. 44(Suppl. 1):S17-S21.
-
(2006)
Med. Mycol.
, vol.44
, Issue.SUPPL. 1
-
-
Baker, S.E.1
-
6
-
-
0029910214
-
Erv25p, a component of COPII-coated vesicles, forms a complex with Emp24p that is required for efficient endoplasmic reticulum to Golgi transport
-
Beiden, W. J., and C. Barlowe. 1996. Erv25p, a component of COPII-coated vesicles, forms a complex with Emp24p that is required for efficient endoplasmic reticulum to Golgi transport. J. Biol. Chem. 271:26939-26946.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 26939-26946
-
-
Beiden, W.J.1
Barlowe, C.2
-
7
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford, M. M. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72:248-254.
-
(1976)
Anal. Biochem.
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
8
-
-
0031766517
-
Identification of the first fungal annexin: Analysis of annexin gene duplications and implications for eukaiyotic evolution
-
Braun, E. L., S. Kang, M. A. Nelson, and D. O. Natvig. 1998. Identification of the first fungal annexin: analysis of annexin gene duplications and implications for eukaiyotic evolution. J. Mol. Evol. 47:531-543.
-
(1998)
J. Mol. Evol.
, vol.47
, pp. 531-543
-
-
Braun, E.L.1
Kang, S.2
Nelson, M.A.3
Natvig, D.O.4
-
9
-
-
71049118063
-
Rab5 isoforms differentially regulate the trafficking and degradation of epidermal growth factor receptors
-
Chen, P. I., C. Kong, X. Su, and P. D. Stahl. 2009. Rab5 isoforms differentially regulate the trafficking and degradation of epidermal growth factor receptors. J. Biol. Chem. 284:30328-30338.
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 30328-30338
-
-
Chen, P.I.1
Kong, C.2
Su, X.3
Stahl, P.D.4
-
10
-
-
62149105996
-
Interplay between Rab5 and PtdIns(4,5)P2 controls early endocytosis in the Drosophila germline
-
Compagnon, J., L. Gervais, M. S. Roman, S. Chamot-Boeuf, and A. Guichet. 2009. Interplay between Rab5 and PtdIns(4,5)P2 controls early endocytosis in the Drosophila germline. J. Cell Sci. 122:25-35.
-
(2009)
J. Cell Sci.
, vol.122
, pp. 25-35
-
-
Compagnon, J.1
Gervais, L.2
Roman, M.S.3
Chamot-Boeuf, S.4
Guichet, A.5
-
11
-
-
0026345502
-
Commercial levels of chymosin production by Aspergillus
-
Dunn-Coleman, N. S., P. Bloebaum, R. M. Berka, E. Bodie, N. Robinson, G. Armstrong, M. Ward, M. Przetak, G. L. Carter, R. LaCost, L. J. Wilson, K. H. Kodama, E. F. Baliu, B. Bower, M. Lamsa, and H. Heinsohn. 1991. Commercial levels of chymosin production by Aspergillus. Nat. Biotechnol. 9:976-981.
-
(1991)
Nat. Biotechnol.
, vol.9
, pp. 976-981
-
-
Dunn-Coleman, N.S.1
Bloebaum, P.2
Berka, R.M.3
Bodie, E.4
Robinson, N.5
Armstrong, G.6
Ward, M.7
Przetak, M.8
Carter, G.L.9
LaCost, R.10
Wilson, L.J.11
Kodama, K.H.12
Baliu, E.F.13
Bower, B.14
Lamsa, M.15
Heinsohn, H.16
-
12
-
-
34250745253
-
Structure and organization of coat proteins in the COPII cage
-
Fath, S., J. D. Mancias, X. Bi, and J. Goldberg. 2007. Structure and organization of coat proteins in the COPII cage. Cell 129:1315-1336.
-
(2007)
Cell
, vol.129
, pp. 1315-1336
-
-
Fath, S.1
Mancias, J.D.2
Bi, X.3
Goldberg, J.4
-
13
-
-
0027507707
-
Structural and functional characterization of Sec66p, a new subunit of the polypeptide translocation apparatus in the yeast endoplasmic reticulum
-
Feldheim, D., K. Yoshimura, A. Admon, and R. Schekman. 1993. Structural and functional characterization of Sec66p, a new subunit of the polypeptide translocation apparatus in the yeast endoplasmic reticulum. Mol. Biol. Cell 4:931-939.
-
(1993)
Mol. Biol. Cell
, vol.4
, pp. 931-939
-
-
Feldheim, D.1
Yoshimura, K.2
Admon, A.3
Schekman, R.4
-
14
-
-
0023463798
-
Improvement of enzyme production in Aspergillus
-
Finkelstein, D. B. 1987. Improvement of enzyme production in Aspergillus. Antonie Van Leeuwenhoek 53:349-352.
-
(1987)
Antonie Van Leeuwenhoek
, vol.53
, pp. 349-352
-
-
Finkelstein, D.B.1
-
15
-
-
7044246160
-
Open mass spectrometry search algorithm
-
Geer, L. Y., S. P. Markey, J. A. Kowalak, L. Wagner, M. Xu, D. M. Maynard, X. Yang, W. Shi, and S. H. Bryant. 2004. Open mass spectrometry search algorithm. J. Proteome Res. 3:958-964.
-
(2004)
J. Proteome Res.
, vol.3
, pp. 958-964
-
-
Geer, L.Y.1
Markey, S.P.2
Kowalak, J.A.3
Wagner, L.4
Xu, M.5
Maynard, D.M.6
Yang, X.7
Shi, W.8
Bryant, S.H.9
-
16
-
-
77954266383
-
Genomics of protein folding in the endoplasmic reticulum, secretion stress and glycosylation in the aspergilli
-
Geysens, S., G. Whyteside, and D. B. Archer. 2009. Genomics of protein folding in the endoplasmic reticulum, secretion stress and glycosylation in the aspergilli. Fungal Genet. Biol. 46:S121-S140.
-
(2009)
Fungal Genet. Biol.
, vol.46
-
-
Geysens, S.1
Whyteside, G.2
Archer, D.B.3
-
17
-
-
33845500104
-
Quantitative proteomics analysis of the secretory pathway
-
Gilchrist, A., C. E. Au, J. Hiding, A. W. Bell, J. Fernandez-Rodriguez, S. Lesimple, H. Nagaya, L. Roy, S. J. Gosline, M. Hallett, J. Paiement, R. E. Kearney, T. Nilsson, and J. J. Bergeron. 2006. Quantitative proteomics analysis of the secretory pathway. Cell 127:1265-1281.
-
(2006)
Cell
, vol.127
, pp. 1265-1281
-
-
Gilchrist, A.1
Au, C.E.2
Hiding, J.3
Bell, A.W.4
Fernandez-Rodriguez, J.5
Lesimple, S.6
Nagaya, H.7
Roy, L.8
Gosline, S.J.9
Hallett, M.10
Paiement, J.11
Kearney, R.E.12
Nilsson, T.13
Bergeron, J.J.14
-
18
-
-
0031054007
-
Efficient production of secreted proteins by Aspergillus: Progress, limitations and prospects
-
Gouka, R. J., P. J. Punt, and C. A. van den Hondel. 1997. Efficient production of secreted proteins by Aspergillus: progress, limitations and prospects. Appl. Microbiol. Biotechnol. 47:1-11.
-
(1997)
Appl. Microbiol. Biotechnol.
, vol.47
, pp. 1-11
-
-
Gouka, R.J.1
Punt, P.J.2
Van Den Hondel, C.A.3
-
19
-
-
0345304749
-
Aspergillus nidulans RhoA is involved in polar growth, branching, and cell wall synthesis
-
Guest, G. M., X. Lin, and M. Momany. 2004. Aspergillus nidulans RhoA is involved in polar growth, branching, and cell wall synthesis. Fungal. Genet. Biol. 41:13-22.
-
(2004)
Fungal. Genet. Biol.
, vol.41
, pp. 13-22
-
-
Guest, G.M.1
Lin, X.2
Momany, M.3
-
20
-
-
34347206863
-
Genomic analysis of the secretion stress response in the enzyme-producing cell factory Aspergillus niger
-
Guillemette, T., N. N. van Peij, T. Goosen, K. Lanthaler, G. D. Robson, C. A. van den Hondel, H. Stam, and D. B. Archer. 2007. Genomic analysis of the secretion stress response in the enzyme-producing cell factory Aspergillus niger. BMC Genomics 8:158.
-
(2007)
BMC Genomics
, vol.8
, pp. 158
-
-
Guillemette, T.1
Van Peij, N.N.2
Goosen, T.3
Lanthaler, K.4
Robson, G.D.5
Van Den Hondel, C.A.6
Stam, H.7
Archer, D.B.8
-
21
-
-
2942620277
-
Functional analysis of the transcriptional activator XlnR from Aspergillus niger
-
Hasper, A. A., L. M. Trindade, D. van der Veen, A. J. van Ooyen, and L. H. de Graaff. 2004. Functional analysis of the transcriptional activator XlnR from Aspergillus niger. Microbiology 150:1367-1375.
-
(2004)
Microbiology
, vol.150
, pp. 1367-1375
-
-
Hasper, A.A.1
Trindade, L.M.2
Van Der Veen, D.3
Van Ooyen, A.J.4
De Graaff, L.H.5
-
22
-
-
0038364020
-
Organelle proteomics: Implications for subcellular fractionation in proteomics
-
Huber, L. A., K. Pfaller, and I. Vietor. 2003. Organelle proteomics: implications for subcellular fractionation in proteomics. Circ. Res. 92:962-968.
-
(2003)
Circ. Res.
, vol.92
, pp. 962-968
-
-
Huber, L.A.1
Pfaller, K.2
Vietor, I.3
-
23
-
-
63849246735
-
Effective lead selection for improved protein production in Aspergillus niger based on integrated genomics
-
Jacobs, D. I., M. M. Olsthoora, I. Maillet, M. Akeroyd, S. Breestraat, S. Donkers, R. A. van der Hoeven, C. A. van den Hondel, R. Kooistra, T. Lapointe, H. Menke, R. Meulenberg, M. Misset, W. H. Muller, N. N. van Peij, A. Ram, S. Rodriguez, M. S. Roelofs, J. A. Roubos, M. W. van Tilborg, A. J. Verkleij, H. J. Pel, H. Stam, and C. M. Sagt. 2009. Effective lead selection for improved protein production in Aspergillus niger based on integrated genomics. Fungal Genet. Biol. 46(Suppl. 1):S141-S152.
-
(2009)
Fungal Genet. Biol.
, vol.46
, Issue.SUPPL. 1
-
-
Jacobs, D.I.1
Olsthoora, M.M.2
Maillet, I.3
Akeroyd, M.4
Breestraat, S.5
Donkers, S.6
Van Der Hoeven, R.A.7
Van Den Hondel, C.A.8
Kooistra, R.9
Lapointe, T.10
Menke, H.11
Meulenberg, R.12
Misset, M.13
Muller, W.H.14
Van Peij, N.N.15
Ram, A.16
Rodriguez, S.17
Roelofs, M.S.18
Roubos, J.A.19
Van Tilborg, M.W.20
Verkleij, A.J.21
Pel, H.J.22
Stam, H.23
Sagt, C.M.24
more..
-
24
-
-
33845660879
-
The Tetrahymena thermophila phagosome proteome
-
Jacobs, M. E., L. V. DeSouza, H. Samaranayake, R. E. Pearlman, K. W. Siu, and L. A. Klobutcher. 2006. The Tetrahymena thermophila phagosome proteome. Eukaryot. Cell 5:1990-2000.
-
(2006)
Eukaryot. Cell
, vol.5
, pp. 1990-2000
-
-
Jacobs, M.E.1
DeSouza, L.V.2
Samaranayake, H.3
Pearlman, R.E.4
Siu, K.W.5
Klobutcher, L.A.6
-
25
-
-
0028068165
-
Cloning and characterization of the pepE gene of Aspergillus niger encoding a new aspartic protease and regulation of pepE and pepC
-
Jarai, G., H. van den Hombergh, and F. P. Buxton. 1994. Cloning and characterization of the pepE gene of Aspergillus niger encoding a new aspartic protease and regulation of pepE and pepC. Gene 145:171-178.
-
(1994)
Gene
, vol.145
, pp. 171-178
-
-
Jarai, G.1
Van Den Hombergh, H.2
Buxton, F.P.3
-
26
-
-
60549083506
-
Transcriptomic comparison of Aspergillus niger growing on two different sugars reveals coordinated regulation of the secretory pathway
-
Jørgensen, T. R., T. Goosen, C. A. van den Hondel, A. F. Ram, and J. J. Iversen. 2009. Transcriptomic comparison of Aspergillus niger growing on two different sugars reveals coordinated regulation of the secretory pathway. BMC Genomics 10:44.
-
(2009)
BMC Genomics
, vol.10
, pp. 44
-
-
Jørgensen, T.R.1
Goosen, T.2
Van Den Hondel, C.A.3
Ram, A.F.4
Iversen, J.J.5
-
27
-
-
20044382419
-
Physiological effects of unassembled chaperonin Cct subunits in the yeast Saccharomyces cerevisiae
-
Kabir, M. A., J. Kaminska, G. B. Segel, G. Bethlendy, P. Lin, F. Della Seta, C. Biegen, K. M. Swiderek, T. Zoladek, K. T. Arndt, and F. Sherman. 2005. Physiological effects of unassembled chaperonin Cct subunits in the yeast Saccharomyces cerevisiae. Yeast 22:219-239.
-
(2005)
Yeast
, vol.22
, pp. 219-239
-
-
Kabir, M.A.1
Kaminska, J.2
Segel, G.B.3
Bethlendy, G.4
Lin, P.5
Della Seta, F.6
Biegen, C.7
Swiderek, K.M.8
Zoladek, T.9
Arndt, K.T.10
Sherman, F.11
-
28
-
-
0031437891
-
The highly conserved Stt3 protein is a subunit of the yeast oligosaccharyltransferase and forms a subcomplex with Ost3p and Ost4p
-
Karaoglu, D., D. J. Kelleher, and R. Gilmore. 1997. The highly conserved Stt3 protein is a subunit of the yeast oligosaccharyltransferase and forms a subcomplex with Ost3p and Ost4p. J. Biol. Chem. 272:32513-32520.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 32513-32520
-
-
Karaoglu, D.1
Kelleher, D.J.2
Gilmore, R.3
-
29
-
-
33645993265
-
Global survey of organ and organelle protein expression in mouse: Combined proteomic and transcriptomic profiling
-
Kislinger, T., B. Cox, A. Kannan, C. Chung, P. Hu, A. Ignatchenko, M. S. Scott, A. O. Gramolini, Q. Morris, M. T. Hallett, J. Rossant, T. R. Hughes, B. Frey, and A. Emili. 2006. Global survey of organ and organelle protein expression in mouse: combined proteomic and transcriptomic profiling. Cell 125:173-186.
-
(2006)
Cell
, vol.125
, pp. 173-186
-
-
Kislinger, T.1
Cox, B.2
Kannan, A.3
Chung, C.4
Hu, P.5
Ignatchenko, A.6
Scott, M.S.7
Gramolini, A.O.8
Morris, Q.9
Hallett, M.T.10
Rossant, J.11
Hughes, T.R.12
Frey, B.13
Emili, A.14
-
30
-
-
0033793731
-
Dolichol phosphate mannose synthase from the fil amentous fungus Trichoderma reesei belongs to the human and Schizosaccharomyces pombe class of the enzyme
-
Kruszewska, J. S., M. Saloheimo, A. Migdalski, P. Orlean, M. Penttilä, and G. Palamarczyk. 2000. Dolichol phosphate mannose synthase from the fil amentous fungus Trichoderma reesei belongs to the human and Schizosaccharomyces pombe class of the enzyme. Glycobiology 10:983-991.
-
(2000)
Glycobiology
, vol.10
, pp. 983-991
-
-
Kruszewska, J.S.1
Saloheimo, M.2
Migdalski, A.3
Orlean, P.4
Penttilä, M.5
Palamarczyk, G.6
-
32
-
-
57249097123
-
Developing Aspergillus as a host for heterologous expression
-
Lubertozzi, D., and J. D. Keasling. 2009. Developing Aspergillus as a host for heterologous expression. Biotechnol. Adv. 27:53-75.
-
(2009)
Biotechnol. Adv.
, vol.27
, pp. 53-75
-
-
Lubertozzi, D.1
Keasling, J.D.2
-
33
-
-
29344434866
-
The relevance of mitochondrial membrane topology to mitochondrial function
-
Mannella, C. A. 2006. The relevance of mitochondrial membrane topology to mitochondrial function. Biochim. Biophys. Acta 1762:140-147.
-
(2006)
Biochim. Biophys. Acta
, vol.1762
, pp. 140-147
-
-
Mannella, C.A.1
-
34
-
-
23844518360
-
Analysis of secreted proteins from Aspergillus fiavus
-
Medina, M. L., P. A. Haynes, L. Breci, and W. A. Francisco. 2005. Analysis of secreted proteins from Aspergillus fiavus. Proteomics 5:3153-3161.
-
(2005)
Proteomics
, vol.5
, pp. 3153-3161
-
-
Medina, M.L.1
Haynes, P.A.2
Breci, L.3
Francisco, W.A.4
-
35
-
-
0034795111
-
A defined level of protein disulfide isomerase expression is required for optimal secretion of thaumatin by Aspegillus awamori
-
Moralejo, F. J., A. J. Watson, D. J. Jeenes, D. B. Archer, and J. F. Martin. 2001. A defined level of protein disulfide isomerase expression is required for optimal secretion of thaumatin by Aspegillus awamori. Mol. Genet. Genomics 266:246-253.
-
(2001)
Mol. Genet. Genomics
, vol.266
, pp. 246-253
-
-
Moralejo, F.J.1
Watson, A.J.2
Jeenes, D.J.3
Archer, D.B.4
Martin, J.F.5
-
36
-
-
33646570211
-
Proteomic analysis of extracellular proteins from Aspergillus oryzae grown under submerged and solid-state culture conditions
-
Oda, K., D. Kakizono, O. Yamada, H. Iefuji, O. Akita, and K. Iwashita. 2006. Proteomic analysis of extracellular proteins from Aspergillus oryzae grown under submerged and solid-state culture conditions. Appl. Environ. Microbiol. 72:3448-3457.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 3448-3457
-
-
Oda, K.1
Kakizono, D.2
Yamada, O.3
Iefuji, H.4
Akita, O.5
Iwashita, K.6
-
37
-
-
51849146893
-
Efficient cloning system for construction of gene silencing vectors in Aspergillus niger
-
Oliveira, J. M., D. van der Veen, L. H. de Graaff, and L. Qin. 2008. Efficient cloning system for construction of gene silencing vectors in Aspergillus niger. Appl. Microbiol. Biotechnol. 80:917-924.
-
(2008)
Appl. Microbiol. Biotechnol.
, vol.80
, pp. 917-924
-
-
Oliveira, J.M.1
Van Der Veen, D.2
De Graaff, L.H.3
Qin, L.4
-
38
-
-
0034624745
-
Distinct involvement of cdc42 and RhoA GTPases in actin organization and cell shape in untransformed and Dbl oncogene transformed NIH3T3 cells
-
Olivo, C., C. Vanni, P. Mancini, L. Silengo, M. R. Torrisi, G. Tarone, P. Defilippi, and A. Eva. 2000. Distinct involvement of cdc42 and RhoA GTPases in actin organization and cell shape in untransformed and Dbl oncogene transformed NIH3T3 cells. Oncogene 19:1428-1436.
-
(2000)
Oncogene
, vol.19
, pp. 1428-1436
-
-
Olivo, C.1
Vanni, C.2
Mancini, P.3
Silengo, L.4
Torrisi, M.R.5
Tarone, G.6
Defilippi, P.7
Eva, A.8
-
39
-
-
0035809210
-
Erv41p and Erv46p: New components of COPII vesicles involved in transport between the ER and Golgi complex
-
Otte, S., W. J. Beiden, M. Heidtman, J. Liu, O. N. Jensen, and C. Barlowe. 2001. Erv41p and Erv46p: new components of COPII vesicles involved in transport between the ER and Golgi complex. J. Cell Biol. 152:503-518.
-
(2001)
J. Cell Biol.
, vol.152
, pp. 503-518
-
-
Otte, S.1
Beiden, W.J.2
Heidtman, M.3
Liu, J.4
Jensen, O.N.5
Barlowe, C.6
-
40
-
-
63849107219
-
Studies of the production of fungal polyketides in Aspergillus nidulans by using systems biology tools
-
Panagiotou, G., M. R. Andersen, T. Grotkjaer, T. B. Regueira, J. Nielsen, and L. Olsson. 2009. Studies of the production of fungal polyketides in Aspergillus nidulans by using systems biology tools. Appl. Environ. Microbiol. 75:2212-2220.
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 2212-2220
-
-
Panagiotou, G.1
Andersen, M.R.2
Grotkjaer, T.3
Regueira, T.B.4
Nielsen, J.5
Olsson, L.6
-
41
-
-
70350098081
-
Organization and dynamics of the Aspergillus nidulans Golgi during apical extension and mitosis
-
Pantazopoulou, A., and M. A. Peñalva. 2009. Organization and dynamics of the Aspergillus nidulans Golgi during apical extension and mitosis. Mol. Biol. Cell 20:4335-4347.
-
(2009)
Mol. Biol. Cell
, vol.20
, pp. 4335-4347
-
-
Pantazopoulou, A.1
Peñalva, M.A.2
-
42
-
-
33846861493
-
Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88
-
Pel, H. J., J. H. de Winde, D. B. Archer, P. S. Dyer, G. Hofmann, P. J. Schaap, G. Turner, R. P. de Vries, R. Albang, K. Albermann, M. R. Andersen, J. D. Bendtsen, J. A. E. Benen, M. van den Berg, S. Breestraat, M. X. Caddick, R. Contreras, M. Cornell, P. M. Coutinho, E. G. J. Danchin, A. J. M. Debets, P. Dekker, P. W. M. van Dijck, A. van Dijk, L. Dijkhuizen, A. J. M. Driessen, C. d'Enfert, S. Geysens, C. Goosen, G. S. P. Groot, P. W. J. de Groot, T. Guillemette, B. Henrissat, M. Herweijer, J. P. T. W. van den Hombergh, C. A. M. J. J. van den Hondel, R. T. J. M. van der Heijden, R. M. van der Kaaij, F. M. Klis, H. J. Kools, C. P. Kubicek, P. A. van Kuyk, J. Lauber, X. Lu, M. J. E. C. van der Maarel, R. Meulenberg, H. Menke, M. A. Mortimer, J. Nielsen, S. G. Oliver, M. Olsthoorn, K. Pal, N. N. M. E. van Peij, A. F. J. Ram, U. Rinas, J. A. Roubos, C. M. J. Sagt, M. Schmoll, J. B. Sun, D. Ussery, J. Varga, W. Vervecken, P. J. J. V. de Vondervoort, H. Wedler, H. A. B. Wösten, A. P. Zeng, A. J. J. van Ooyen, J. Visser, and H. Stam. 2007. Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88. Nat. Biotechnol. 25:221-231.
-
(2007)
Nat. Biotechnol.
, vol.25
, pp. 221-231
-
-
Pel, H.J.1
De Winde, J.H.2
Archer, D.B.3
Dyer, P.S.4
Hofmann, G.5
Schaap, P.J.6
Turner, G.7
De Vries, R.P.8
Albang, R.9
Albermann, K.10
Andersen, M.R.11
Bendtsen, J.D.12
Benen, J.A.E.13
Van Den Berg, M.14
Breestraat, S.15
Caddick, M.X.16
Contreras, R.17
Cornell, M.18
Coutinho, P.M.19
Danchin, E.G.J.20
Debets, A.J.M.21
Dekker, P.22
Van Dijck, P.W.M.23
Van Dijk, A.24
Dijkhuizen, L.25
Driessen, A.J.M.26
D'Enfert, C.27
Geysens, S.28
Goosen, C.29
Groot, G.S.P.30
De Groot, P.W.J.31
Guillemette, T.32
Henrissat, B.33
Herweijer, M.34
Van Den Hombergh, J.P.T.W.35
Van Den Hondel, C.A.M.J.J.36
Van Der Heijden, R.T.J.M.37
Van Der Kaaij, R.M.38
Klis, F.M.39
Kools, H.J.40
Kubicek, C.P.41
Van Kuyk, P.A.42
Lauber, J.43
Lu, X.44
Van Der Maarel, M.J.E.C.45
Meulenberg, R.46
Menke, H.47
Mortimer, M.A.48
Nielsen, J.49
Oliver, S.G.50
Olsthoorn, M.51
Pal, K.52
Van Peij, N.N.M.E.53
Ram, A.F.J.54
Rinas, U.55
Roubos, J.A.56
Sagt, C.M.J.57
Schmoll, M.58
Sun, J.B.59
Ussery, D.60
Varga, J.61
Vervecken, W.62
De Vondervoort, P.J.J.V.63
Wedler, H.64
Wösten, H.A.B.65
Zeng, A.P.66
Van Ooyen, A.J.J.67
Visser, J.68
Stam, H.69
more..
-
43
-
-
17344392308
-
A new mathematical model for relative quantification in real-time RT-PCR
-
Pfaffl, M. W. 2001. A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res. 29:e45.
-
(2001)
Nucleic Acids Res.
, vol.29
-
-
Pfaffl, M.W.1
-
44
-
-
49249124795
-
The genetics of Aspergillus nidulans
-
Pontecorvo, G., J. A. Roper, L. M. Hemmons, K. D. Macdonald, and A. W. Bufton. 1953. The genetics of Aspergillus nidulans. Adv. Genet. 5:141-238.
-
(1953)
Adv. Genet.
, vol.5
, pp. 141-238
-
-
Pontecorvo, G.1
Roper, J.A.2
Hemmons, L.M.3
Macdonald, K.D.4
Bufton, A.W.5
-
45
-
-
0034897768
-
Identification and characterization of a family of secretion-related small GTFase-encoding genes from the filamentous fungus Aspergillus niger: A putative SEC4 homologue is not essential for growth
-
Punt, P. J., B. Seiboth, X. O. Weenink, C. van Zeijl, M. Lenders, C. Konetschny, A. F. Ram, R. Montijn, C. P. Kubicek, and C. A. van den Hondel. 2001. Identification and characterization of a family of secretion-related small GTFase-encoding genes from the filamentous fungus Aspergillus niger: a putative SEC4 homologue is not essential for growth. Mol. Microbiol. 41:513-525.
-
(2001)
Mol. Microbiol.
, vol.41
, pp. 513-525
-
-
Punt, P.J.1
Seiboth, B.2
Weenink, X.O.3
Van Zeijl, C.4
Lenders, M.5
Konetschny, C.6
Ram, A.F.7
Montijn, R.8
Kubicek, C.P.9
Van Den Hondel, C.A.10
-
46
-
-
0032418442
-
Localization of a phosphatidylglycerol/phosphatidylinositol transfer protein in Aspergillus oryzae
-
Record, E., M. Asther, S. Moukha, D. Marion, V. Burlat, K. Ruel, and M. Asther. 1998. Localization of a phosphatidylglycerol/phosphatidylinositol transfer protein in Aspergillus oryzae. Can. J. Microbiol. 44:945-953.
-
(1998)
Can. J. Microbiol.
, vol.44
, pp. 945-953
-
-
Record, E.1
Asther, M.2
Moukha, S.3
Marion, D.4
Burlat, V.5
Ruel, K.6
Asther, M.7
-
47
-
-
0032511112
-
2+ responses
-
2+ responses. Science 280:1763-1766.
-
(1998)
Science
, vol.280
, pp. 1763-1766
-
-
Rizzuto, R.1
Pinton, P.2
Carrington, W.3
Fay, F.S.4
Fogarty, K.E.5
Lifshitz, L.M.6
Tuft, R.A.7
Pozzan, T.8
-
48
-
-
0027973135
-
A unique mitochondria-associated membrane fraction from rat liver has a high capacity for lipid synthesis and contains pre-Golgi secretory proteins including nascent lipoproteins
-
Rusiñol, A. E., Z. Cui, M. H. Chen, and J. E. Vance. 1994. A unique mitochondria-associated membrane fraction from rat liver has a high capacity for lipid synthesis and contains pre-Golgi secretory proteins including nascent lipoproteins. J. Biol. Chem. 269:27494-27502.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 27494-27502
-
-
Rusiñol, A.E.1
Cui, Z.2
Chen, M.H.3
Vance, J.E.4
-
49
-
-
0031823307
-
A membrane coat complex essential for endosome-to-Golgi retrograde transport in yeast
-
Seaman, M. N., J. M. McCaffery, and S. D. Emr. 1998. A membrane coat complex essential for endosome-to-Golgi retrograde transport in yeast. J. Cell Biol. 142:665-681.
-
(1998)
J. Cell Biol.
, vol.142
, pp. 665-681
-
-
Seaman, M.N.1
McCaffery, J.M.2
Emr, S.D.3
-
51
-
-
33646347654
-
Organelle proteomics reveals cargo maturation mechanisms associated with Golgi-like encystation vesicles in the early-diverged protozoan
-
Štefanić, S., D. Palm, S. G. Svärd, and A. B. Hehl. 2006. Organelle proteomics reveals cargo maturation mechanisms associated with Golgi-like encystation vesicles in the early-diverged protozoan Giardia lamblia. J. Biol. Chem. 281:7595-7604.
-
(2006)
Giardia Lamblia. J. Biol. Chem.
, vol.281
, pp. 7595-7604
-
-
Štefanić, S.1
Palm, D.2
Svärd, S.G.3
Hehl, A.B.4
-
52
-
-
41149112019
-
Metabolic peculiarities of Aspergillus niger disclosed by comparative metabolic genomics
-
Sun, J., X. Lu, U. Rinas, and A. P. Zeng. 2007. Metabolic peculiarities of Aspergillus niger disclosed by comparative metabolic genomics. Genome Biol. 8:R182.
-
(2007)
Genome Biol.
, vol.8
-
-
Sun, J.1
Lu, X.2
Rinas, U.3
Zeng, A.P.4
-
53
-
-
42549133189
-
The tip growth apparatus of Aspergillus nidulans
-
Taheri-Talesh, N., T. Horio, L. Araújo-Bazán, X. Dou, E. A. Espeso, M. A. Peñalva, S. A. Osmani, and B. R. Oakley. 2008. The tip growth apparatus of Aspergillus nidulans. Mol. Biol. Cell 19:1439-1449.
-
(2008)
Mol. Biol. Cell
, vol.19
, pp. 1439-1449
-
-
Taheri-Talesh, N.1
Horio, T.2
Araújo-Bazán, L.3
Dou, X.4
Espeso, E.A.5
Peñalva, M.A.6
Osmani, S.A.7
Oakley, B.R.8
-
54
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
55
-
-
67650621098
-
Analytical and computational approaches to define the Aspergillus niger secretouteme
-
Tsang, A., G. Butler, J. Powlowski, E. A. Panisko, and S. E. Baker. 2009. Analytical and computational approaches to define the Aspergillus niger secretouteme. Fungal. Genet. Biol. 46(Suppl. 1):S153-S160.
-
(2009)
Fungal. Genet. Biol.
, vol.46
, Issue.SUPPL. 1
-
-
Tsang, A.1
Butler, G.2
Powlowski, J.3
Panisko, E.A.4
Baker, S.E.5
-
56
-
-
64749098164
-
Analysis of variance components reveals the contribution of sample processing to transcript variation
-
van der Veen, D., J. M. Oliveira, W. A. van den Berg, and L. H. de Graaff. 2009. Analysis of variance components reveals the contribution of sample processing to transcript variation. Appl. Environ. Microbiol. 75:2414-2422.
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 2414-2422
-
-
Van Der Veen, D.1
Oliveira, J.M.2
Van Den Berg, W.A.3
De Graaff, L.H.4
-
57
-
-
57749105343
-
The Cladosporium fulvum virulence protein Avr2 inhibits host proteases required for basal defense
-
van Esse, H. P., J. W. van't Klooster, M. D. Bolton, K. A. Yadeta, P. van Baarlen, S. Boeren, J. Vervoort, P. J. de Wit, and B. P. Thomma. 2008. The Cladosporium fulvum virulence protein Avr2 inhibits host proteases required for basal defense. Plant Cell 20:1948-1963.
-
(2008)
Plant Cell
, vol.20
, pp. 1948-1963
-
-
Van Esse, H.P.1
Van'T Klooster, J.W.2
Bolton, M.D.3
Yadeta, K.A.4
Van Baarlen, P.5
Boeren, S.6
Vervoort, J.7
De Wit, P.J.8
Thomma, B.P.9
-
58
-
-
0031962771
-
Isolation and analysis of xlnR, encoding a transcriptional activator co-ordinating xylanolytic expression in Aspergillus niger
-
van Peij, N. N., J. Visser, and L. H. de Graaff. 1998. Isolation and analysis of xlnR, encoding a transcriptional activator co-ordinating xylanolytic expression in Aspergillus niger. Mol. Microbiol. 27:131-142.
-
(1998)
Mol. Microbiol.
, vol.27
, pp. 131-142
-
-
Van Peij, N.N.1
Visser, J.2
De Graaff, L.H.3
-
59
-
-
0031578704
-
Expression and characterization of recombinant murine lactoferrin
-
Ward, P. P., H. Chu, X. Zhou, and O. M. Conneely. 1997. Expression and characterization of recombinant murine lactoferrin. Gene 204:171-176.
-
(1997)
Gene
, vol.204
, pp. 171-176
-
-
Ward, P.P.1
Chu, H.2
Zhou, X.3
Conneely, O.M.4
-
60
-
-
65449188232
-
Jalview version 2-a multiple sequence alignment editor and analysis workbench
-
Waterhouse, A. M., J. B. Procter, D. M. Martin, M. Clamp, and G. J. Barton. 2009. Jalview version 2-a multiple sequence alignment editor and analysis workbench. Bioinformatics 25:1189-1191.
-
(2009)
Bioinformatics
, vol.25
, pp. 1189-1191
-
-
Waterhouse, A.M.1
Procter, J.B.2
Martin, D.M.3
Clamp, M.4
Barton, G.J.5
-
61
-
-
2542485409
-
Organellar proteomics reveals Golgi arginine dimethylation
-
Wu, C. C., M. J. MacCoss, G. Mardones, C. Finnigan, S. Mogelsvang, J. R. Yates III, and K. E. Howell. 2004. Organellar proteomics reveals Golgi arginine dimethylation. Mol. Biol. Cell 15:2907-2919.
-
(2004)
Mol. Biol. Cell
, vol.15
, pp. 2907-2919
-
-
Wu, C.C.1
MacCoss, M.J.2
Mardones, G.3
Finnigan, C.4
Mogelsvang, S.5
Yates III, J.R.6
Howell, K.E.7
-
62
-
-
0032744490
-
Adaptor complex-independent clathrin function in yeast
-
Yeung, B. G., H. L. Phan, and G. S. Payne. 1999. Adaptor complex-independent clathrin function in yeast. Mol. Biol. Cell 10:3643-3659.
-
(1999)
Mol. Biol. Cell
, vol.10
, pp. 3643-3659
-
-
Yeung, B.G.1
Phan, H.L.2
Payne, G.S.3
-
63
-
-
33748319353
-
Statistical analysis of membrane proteome expression changes in Saccharomyces cerevisiae
-
Zybailov, B., A. L. Mosley, M. E. Sardiu, M. K. Coleman, L. Florens, and M. P. Washburn. 2006. Statistical analysis of membrane proteome expression changes in Saccharomyces cerevisiae. J. Proteome Res. 5:2339-2347.
-
(2006)
J. Proteome Res.
, vol.5
, pp. 2339-2347
-
-
Zybailov, B.1
Mosley, A.L.2
Sardiu, M.E.3
Coleman, M.K.4
Florens, L.5
Washburn, M.P.6
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