Dolabra nepheliae on rambutan and lychee represents a novel lineage of phytopathogenic Eurotiomycetes

Mycoscience

Volumn 51, Issue 4, 2010, Pages 300-309

  Rossman, Amy Y ^a   Schoch, Conrad L ^b   Farr, David F ^a   Nishijima, Kate ^c   Keith, Lisa ^c   Goenaga, Ricardo ^c  

^a AGRICULTURAL RESEARCH SERVICE   (United States)

^b NATIONAL INSTITUTES OF HEALTH   (United States)

^c AGRICULTURAL RESEARCH SERVICE   (United States)

Author keywords

Canker; Litchi; Nephelium; Phaeomoniella chlamydospora; Sapindaceae; Systematics

Indexed keywords

ASCOMYCOTA; EUROTIOMYCETES; FUNGI; LITCHI CHINENSIS; NEPHELIUM; NEPHELIUM LAPPACEUM; PHAEOMONIELLA CHLAMYDOSPORA; SAPINDACEAE; VITIS;

EID: 77954243520     PISSN: 13403540     EISSN: 16182545     Source Type: Journal    
DOI: 10.1007/s10267-010-0042-y     Document Type: Article

References (38)

1. Booth C, Ting WP (1964) Dolabra nepheliae gen. nov., sp. nov., associated with canker of Nephelium lappaceum. Trans Br Mycol Soc 47: 235-237.
2. Chevenet F, Brun C, Banuls AL, Jacq B, Christen R (2006) TreeDyn: towards dynamic graphics and annotations for analyses of trees. BMC Bioinform 7: 439.
3. Crous PW, Gams W (2000) Phaeomoniella chlamydospora gen. et comb. nov., a causal organism of Petri grapevine decline and esca. Phytopathol Mediterr 39: 112-118.
4. Dupont J, Laloui W, Roquebert MF (2000) Partial ribosomal DNA sequences show an important divergence between Phaeoacremonium species isolated from Vitis vinifera. Mycol Res 102: 631-637.
5. Edgar RC (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32: 1792-1797.
6. Eriksson OE (2006) Outline of Ascomycota. Myconet 12: 1-82.
7. Geiser DM, Gueidan C, Miadlikowska J, Lutzoni F, Kauff F, Hofstetter V, Fraker E, Schoch CL, Tibell L, Untereiner WA, Aptroot A (2006) Eurotiomycetes: Eurotiomycetidae and Chaetothyriomycetidae. Mycologia 98: 1053-1064.
8. Groenewald M, Kang J-C, Crous PW, Gams W (2001) ITS and beta tubulin phylogeny of Phaeoacremonium and Phaeomoniella species. Mycol Res 105: 651-657.
9. Gueidan C, Ruibal CV, de Hoog GS, Gorbushina AA, Untereiner WA, Lutzoni F (2008) An extremotolerant rock-inhabiting ancestor for mutualistic and pathogen-rich fungal lineages. Stud Mycol 62: 111-119.
10. Gueidan C, Savic S, Thus H, Roux C, Keller C, Tibell L, Prieto M, Heiomarsson S, Breuss O, Orange A, Froberg L, Wynns AA, Navarro-Rosines P, Krzewicka B, Pykala J, Grube M, Lutzoni F (2009) Generic classification of the Verrucariaceae (Ascomycota) based on molecular and morphological evidence: recent progress and remaining challenges. Taxon 58: 184-208.
11. Higgins KL, Arnold AE, Miadlikowska J, Sarvate SD, Lutzoni F (2007) Phylogenetic relationships, host affinity, and geographic structure of boreal and arctic endophytes from three major plant lineages. Mol Phylogenet Evol 42: 543-555.
12. Hoffman MT, Arnold AE (2008) Geographic locality and host identity shape fungal endophyte communities in cupressaceous trees. Mycol Res 112: 331-344.
13. Janick J, Paul RE (2008) The Encyclopedia of Fruit and Nuts. CABI, Oxfordshire.
14. Johnston PJ, Minter DW (1989) Structure and taxonomic significance of the ascus in the Coryneliaceae. Mycol Res 92: 422-430.
15. Jones EBG, Abdel-Wahab MA, Alias SA, Hsieh S-Y (1999) Dactylospora mangrovei sp. nov. (Discomycetes, Ascomycota) from mangrove wood. Mycoscience 40: 317-320.
16. Kauff F, Cox CJ, Lutzoni F (2007) WASABI: an automated sequence processing system for multigene phylogenies. Syst Biol 56: 523-531.
17. Kohlmeyer J, Kohlmeyer E (1979) Marine mycology: the higher fungi. Academic Press, New York.
18. Laksmi LDS, Lam PF, Mondoza DB Jr, Kosiyachinda S, Leong PC (1987) Status of the rambutan industry in ASEAN. In: Lam PF, Kosiyachinda S (eds) Rambutan: fruit development, postharvest physiology and marketing in ASEAN. ASEAN Food Handling Bureau, Kuala Lumpur.
19. Lumbsch HT, Huhndorf S (2007) Whatever happened to the pyrenomycetes and loculoascomycetes? Mycol Res 111: 1068-1078.
20. Luttrell ES (1951) Taxonomy of pyrenomycetes. Univ Mo Stud 24: 1-120.
21. Lutzoni F, Kauff F, Cox CJ, McLaughlin D, Celio G, Dentinger B, Padamsee M, Hibbett D, James TY, Baloch E, Grube M, Reeb V, Hofstetter V, Schoch C, Arnold AE, Miadlikowska J, Spatafora J, Johnson D, Hambleton S, Crockett M, Shoemaker R, Sung G-H, Lucking R, Lumbsch T, O'Donnell K, Binder M, Diederich P, Ertz D, Gueidan C, Hansen K, Harris RC, Hosaka K, Lim Y-W, Matheny B, Nishida H, Pfister D, Rogers J, Rossman A, Schmitt I, Sipman H, Stone J, Sugiyama J, Yahr R, Vilgalys R (2004) Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits. Am J Bot 91: 1446-1480.
22. Moretti S, Armougom F, Wallace IM, Higgins DG, Jongeneel CV, Notredame C (2007) The M-Coffee web server: a meta-method for computing multiple sequence alignments by combining alternative alignment methods. Nucleic Acids Res 35: W645-W648.
23. Morton J (1987) Fruits of Warm Climates. Florida Flair, Miami.
24. NASS-USDA (National Agricultural Statistics Service (NASS), USDA, Hawaii Field Office) (2008) Hawaii Tropical Specialty Fruits. Annual Report, released August 14, 2008. NASS, USDA, and Hawaii Department of Agriculture, Agricultural Development Div., Honolulu, HI. http://www. nass. usda. gov/StatisticsbyState/Hawaii/Publications/FruitsandNuts/index. asp.
25. Page RDM (1996) Treeview: an application to display phylogenetic trees on personal computers. Comput Appl Biosci 12: 357-358.
26. Rayner RW (1970) A Mycological Colour Chart. Commonwealth Mycological Institute and British Mycological Society, Kew.
27. Rossman AY, Goenaga R, Keith L (2007) First report of Dolabra nepheliae on rambutan and litchi in Hawaii and Puerto Rico. Plant Dis 91: 1685.
28. Schoch CL, Sung G-H, Lopez-Giraldez F, Townsend JP, Miadlikowska J, Hofstetter V, Robbertse B, Matheny PB, Kauff F, Wang Z, Gueidan C, Andrie RM, Trippe K, Ciufetti LM, Wynns A, Fraker E, Hodkinson BP, Bonito G, Groenewald JZ, Arzanlou M, Sybren de Hoog G, Crous PW, Hewitt D, Pfister DH, Peterson K, Gryzenhout M, Wingfield MJ, Aptroot A, Suh S-O, Blackwell M, Hillis DM, Griffith GW, Castlebury LA, Rossman AY, Lumbsch HT, Lucking R, Budel B, Rauhut A, Diederich P, Ertz D, Geiser DM, Hosaka K, Inderbitzin P, Kohlmeyer J, Volkmann-Kohlmeyer B, Mostert L, Kerry OD, Sipman H, Rogers JD, Shoemaker RA, Sugiyama J, Summerbell RC, Untereiner W, Johnston PR, Stenroos S, Zuccaro A, Dyer PS, Crittenden PD, Cole MS, Hansen K, Trappe JM, Yahr R, Lutzoni F, Spatafora JW (2009) The Ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits. Syst Biol 58: 224-239.
29. Spatafora JW, Sung G-H, Johnson D, Hesse C, O'Rourke B, Serdani M, Spotts R, Lutzoni F, Hofstetter V, Miadlikowska J, Reeb V, Gueidan C, Fraker E, Lumbsch T, Lücking R, Schmitt I, Hosaka K, Aptroot A, Roux C, Miller AN, Geiser DM, Hafellner J, Hestmark G, Arnold AE, Büdel B, Rauhut A, Hewitt D, Untereiner WA, Cole MS, Scheidegger C, Schultz M, Sipman H, Schoch CL (2006) A five gene phylogeny of Pezizomycotina. Mycologia 98: 1018-1028.
30. Stamatakis A (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690.
31. Swofford DL (2002) PAUP*v4. 0b10. Phylogenetic analysis using parsimony (*and other methods). Sinauer Associates, Sunderland.
32. Tindall HD (1994) Rambutan cultivation. FAO Plant Production and Protection. Paper 121. Food and Agriculture Organization of the United Nations, Rome.
33. Vilgalys R, Hester M (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bacteriol 172: 4238-4246.
34. White TJ, Bruns T, Lee SH, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal DNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. Academic Press, New York, pp 315-322.
35. Wiens JJ (2006) Missing data and the design of phylogenetic analyses. J Biomed Inform 39: 34-42.
36. Winka K, Eriksson OE, Bang A (1998) Molecular evidence for recognizing the Chaetothyriales. Mycologia 90: 822-830.
37. Zalasky H, Nawawi A, Ting WP, Tai LH (1971) Dolabra nepheliae and its imperfect state associated with canker of Nephelium lappaceum and N. mutabile. Can J Bot 49: 559-561.
38. Zoller S, Scheidegger C, Sperisen C (1999) PCR primers for the amplification of mitochondrial small subunit ribosomal DNA of lichen-forming Ascomycetes. Lichenologist 31: 511-516.