-
1
-
-
33745532801
-
Increased cell-to-cell variation in gene expression in ageing mouse heart
-
Bahar R, Hartmann CH, Rodriguez KA, Denny AD, Busuttil RA, Dollé MET, Calder RB, Chisholm GB, Pollock BH, Klein CA, et al. 2006. Increased cell-to-cell variation in gene expression in ageing mouse heart. Nature 441: 1011-1014.
-
(2006)
Nature
, vol.441
, pp. 1011-1014
-
-
Bahar, R.1
Hartmann, C.H.2
Rodriguez, K.A.3
Denny, A.D.4
Busuttil, R.A.5
Dollé, M.E.T.6
Calder, R.B.7
Chisholm, G.B.8
Pollock, B.H.9
Klein, C.A.10
-
2
-
-
0037177625
-
Genetic dissection of transcriptional regulation in budding yeast
-
Brem RB, Yvert G, Clinton R, Kruglyak L. 2002. Genetic dissection of transcriptional regulation in budding yeast. Science 296: 752-755.
-
(2002)
Science
, vol.296
, pp. 752-755
-
-
Brem, R.B.1
Yvert, G.2
Clinton, R.3
Kruglyak, L.4
-
3
-
-
42049086126
-
The measurement and analysis of age-related changes in Caenorhabditis elegans
-
(ed. The C. elegans Research Community). doi: 10.1895/ wormbook.1.137.1
-
Collins JJ, Huang C, Hughes S, Kornfeld K. 2008. The measurement and analysis of age-related changes in Caenorhabditis elegans. In WormBook (ed. The C. elegans Research Community). doi: 10.1895/ wormbook.1.137.1.
-
(2008)
WormBook
-
-
Collins, J.J.1
Huang, C.2
Hughes, S.3
Kornfeld, K.4
-
4
-
-
0029586715
-
Evolution of ATP-binding cassette transporter genes
-
Dean M, Allikmets R. 1995. Evolution of ATP-binding cassette transporter genes. Curr Opin Genet Dev 5: 779-785.
-
(1995)
Curr Opin Genet Dev
, vol.5
, pp. 779-785
-
-
Dean, M.1
Allikmets, R.2
-
5
-
-
63549135460
-
Meta-analysis of age-related gene expression profiles identities common signatures of aging
-
de Magalhães JP, Curado J, Church GM. 2009. Meta-analysis of age-related gene expression profiles identities common signatures of aging. Bioinformatics 25: 875-881.
-
(2009)
Bioinformatics
, vol.25
, pp. 875-881
-
-
De Magalhães, J.P.1
Curado, J.2
Church, G.M.3
-
6
-
-
0037174629
-
Timing requirements for insulin/ IGF-1 signaling in C. elegans
-
Dillin A, Crawford DK, Kenyon C. 2002. Timing requirements for insulin/ IGF-1 signaling in C. elegans. Science 298: 830-834.
-
(2002)
Science
, vol.298
, pp. 830-834
-
-
Dillin, A.1
Crawford, D.K.2
Kenyon, C.3
-
7
-
-
77249126597
-
A genomewide library of CB4856/N2 introgression lines of Caenorhabditis elegans
-
doi: 10.1093/nar/gkp528
-
Doroszuk A, Snoek LB, Fradin E, Riksen J, Kammenga J. 2009. A genomewide library of CB4856/N2 introgression lines of Caenorhabditis elegans. Nucleic Acids Res 37: e110. doi: 10.1093/nar/gkp528.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Doroszuk, A.1
Snoek, L.B.2
Fradin, E.3
Riksen, J.4
Kammenga, J.5
-
8
-
-
66349105102
-
Genetic dissection of a major mouse obesity QTL (Carfhg2): Integration of gene expression and causality modeling
-
Farber CR, Aten JE, Farber EA, de Vera V, Gularte A, Islas-Trejo A, Wen P, Horvath S, Lucero M, Lusis AJ, et al. 2009. Genetic dissection of a major mouse obesity QTL (Carfhg2): Integration of gene expression and causality modeling. Physiol Genomics 37: 294-302.
-
(2009)
Physiol Genomics
, vol.37
, pp. 294-302
-
-
Farber, C.R.1
Aten, J.E.2
Farber, E.A.3
De Vera, V.4
Gularte, A.5
Islas-Trejo, A.6
Wen, P.7
Horvath, S.8
Lucero, M.9
Lusis, A.J.10
-
9
-
-
9244240317
-
Analysis of gene expression patterns and chromosomal changes associate with aging
-
Geigl JB, Langer S, Barwisch S, Pfleghaar K, Lederer G, Speicher MR. 2004. Analysis of gene expression patterns and chromosomal changes associate with aging. Cancer Res 64: 8550-8557.
-
(2004)
Cancer Res
, vol.64
, pp. 8550-8557
-
-
Geigl, J.B.1
Langer, S.2
Barwisch, S.3
Pfleghaar, K.4
Lederer, G.5
Speicher, M.R.6
-
10
-
-
73349119114
-
Expression quantitative trait loci are highly sensitive to cellular differentiation state
-
doi: 10.1371/journal.pgen.1000692
-
Gerrits A, Li Y, Tesson BM, Bystrykh LV, Weersing E, Ausema A, Dontje B, Wang X, Breitling R, Jansen RC, de Haan G. 2009. Expression quantitative trait loci are highly sensitive to cellular differentiation state. PLoS Genet 5: e1000692. doi: 10.1371/journal.pgen.1000692.
-
(2009)
PLoS Genet
, vol.5
-
-
Gerrits, A.1
Li, Y.2
Tesson, B.M.3
Bystrykh, L.V.4
Weersing, E.5
Ausema, A.6
Dontje, B.7
Wang, X.8
Breitling, R.9
Jansen, R.C.10
De Haan, G.11
-
11
-
-
33845809937
-
Mapping phenotypic plasticity and genotype-environment interactions affecting life-history traits in Caenorhabditis elegans
-
Gutteling EW, Riksen JAG, Bakker J, Kammenga JE. 2007. Mapping phenotypic plasticity and genotype-environment interactions affecting life-history traits in Caenorhabditis elegans. Heredity 98: 28-37.
-
(2007)
Heredity
, vol.98
, pp. 28-37
-
-
Gutteling, E.W.1
Riksen, J.A.G.2
Bakker, J.3
Kammenga, J.E.4
-
12
-
-
21144460742
-
Analysis of long-lived C. elegans daf-2 mutants using serial analysis of gene expression
-
Halaschek-Wiener J, Khattra JS, McKay S, Pouzyrev A, Stott JM, Yang GS, Holt RA, Jones SJM, Marra MA, Brooks-Wilson AR, et al. 2005. Analysis of long-lived C. elegans daf-2 mutants using serial analysis of gene expression. Genome Res 15: 603-615.
-
(2005)
Genome Res
, vol.15
, pp. 603-615
-
-
Halaschek-Wiener, J.1
Khattra, J.S.2
McKay, S.3
Pouzyrev, A.4
Stott, J.M.5
Yang, G.S.6
Holt, R.A.7
Jones, S.J.M.8
Marra, M.A.9
Brooks-Wilson, A.R.10
-
13
-
-
0034721722
-
Genomic analysis of gene expression in C. elegans
-
Hill AA, Hunter CP, Tsung BT, Tucker-Kellogg G, Brown EL. 2000. Genomic analysis of gene expression in C. elegans. Science 290: 809-812.
-
(2000)
Science
, vol.290
, pp. 809-812
-
-
Hill, A.A.1
Hunter, C.P.2
Tsung, B.T.3
Tucker-Kellogg, G.4
Brown, E.L.5
-
14
-
-
0035400051
-
Genetical genomics: The added value from segregation
-
Jansen RC, Nap J-P. 2001. Genetical genomics: The added value from segregation. Trends Genet 17: 388-391.
-
(2001)
Trends Genet
, vol.17
, pp. 388-391
-
-
Jansen, R.C.1
Nap, J.-P.2
-
15
-
-
0035793050
-
Genome-wide analysis of developmental and sex-regulated gene expression profiles in Caenorhabditis elegans
-
Jiang M, Ryu J, Kiraly M, Duke K, Reinke V, Kim SK. 2001. Genome-wide analysis of developmental and sex-regulated gene expression profiles in Caenorhabditis elegans. Proc Nat Acad Sci 98: 218-223.
-
(2001)
Proc Nat Acad Sci
, vol.98
, pp. 218-223
-
-
Jiang, M.1
Ryu, J.2
Kiraly, M.3
Duke, K.4
Reinke, V.5
Kim, S.K.6
-
16
-
-
34047221176
-
A Caenorhabditis elegans wild type defies the temperature-size rule owing to a single nucleotide polymorphism in tra-3
-
doi: 10.1371/journal.pgen. 0030034
-
Kammenga JE, Doroszuk A, Riksen JAG, Hazendonk E, Spiridon L, Petrescu AJ, Tijsterman M, Plasterk RH, Bakker J. 2007. A Caenorhabditis elegans wild type defies the temperature-size rule owing to a single nucleotide polymorphism in tra-3. PLoS Genet 3: e34. doi: 10.1371/journal.pgen. 0030034.
-
(2007)
PLoS Genet
, vol.3
-
-
Kammenga, J.E.1
Doroszuk, A.2
Riksen, J.A.G.3
Hazendonk, E.4
Spiridon, L.5
Petrescu, A.J.6
Tijsterman, M.7
Plasterk, R.H.8
Bakker, J.9
-
17
-
-
33846818896
-
Regulatory network construction in Arabidopsis by using genome-wide gene expression quantitative trait loci
-
Keurentjes JJB, Fu J, Terpstra IR, Garcia JM, Van Den Ackerveken G, Snoek LB, Peeters AJM, Vreugdenhil D, Koornneef M, Jansen RC, et al. 2007. Regulatory network construction in Arabidopsis by using genome-wide gene expression quantitative trait loci. Proc Nat Acad Sci 104: 1708-1713.
-
(2007)
Proc Nat Acad Sci
, vol.104
, pp. 1708-1713
-
-
Keurentjes, J.J.B.1
Fu, J.2
Terpstra, I.R.3
Garcia, J.M.4
Van Den Ackerveken, G.5
Snoek, L.B.6
Peeters, A.J.M.7
Vreugdenhil, D.8
Koornneef, M.9
Jansen, R.C.10
-
18
-
-
34748826813
-
Caenorhabditis elegans pgp-5 is involved in resistance to bacterial infection and heavy metal and its regulation requires TIR-1 and a p38 map kinase cascade
-
Kurz CL, Shapira M, Chen K, Baillie DL, Tan M-W. 2007. Caenorhabditis elegans pgp-5 is involved in resistance to bacterial infection and heavy metal and its regulation requires TIR-1 and a p38 map kinase cascade. Biochem Biophys Res Commun 363: 438-443.
-
(2007)
Biochem Biophys Res Commun
, vol.363
, pp. 438-443
-
-
Kurz, C.L.1
Shapira, M.2
Chen, K.3
Baillie, D.L.4
Tan, M.-W.5
-
19
-
-
33845976693
-
Mapping determinants of gene expression plasticity by genetical genomics in C. elegans
-
doi: 10.1371/journal.pgen.0020222
-
Li Y, Alvarez OA, Gutteling EW, Tijsterman M, Fu J, Riksen JA, Hazendonk E, Prins P, Plasterk RH, Jansen RC, et al. 2006. Mapping determinants of gene expression plasticity by genetical genomics in C. elegans. PLoS Genet 2: e222. doi: 10.1371/journal.pgen.0020222.
-
(2006)
PLoS Genet
, vol.2
-
-
Li, Y.1
Alvarez, O.A.2
Gutteling, E.W.3
Tijsterman, M.4
Fu, J.5
Riksen, J.A.6
Hazendonk, E.7
Prins, P.8
Plasterk, R.H.9
Jansen, R.C.10
-
20
-
-
3042631024
-
Gene regulation and DNA damage in the ageing human brain
-
Lu T, Pan Y, Kao SY, Li C, Kohane I, Chan J, Yankner BA. 2004. Gene regulation and DNA damage in the ageing human brain. Nature 429: 883-891.
-
(2004)
Nature
, vol.429
, pp. 883-891
-
-
Lu, T.1
Pan, Y.2
Kao, S.Y.3
Li, C.4
Kohane, I.5
Chan, J.6
Yankner, B.A.7
-
21
-
-
0037125942
-
Transcriptional profile of aging in C. elegans
-
Lund J, Tedesco P, Duke K, Wang J, Kim SK, Johnson TE. 2002. Transcriptional profile of aging in C. elegans. Curr Biol 12: 1566-1573.
-
(2002)
Curr Biol
, vol.12
, pp. 1566-1573
-
-
Lund, J.1
Tedesco, P.2
Duke, K.3
Wang, J.4
Kim, S.K.5
Johnson, T.E.6
-
22
-
-
0033534534
-
Molecular mechanisms of bacterial virulence elucidated using a Pseudomonas aeruginosa-Caenorhabditis elegans pathogenesis model
-
Mahajan-Miklos S, Tan M-W, Rahme LG, Ausubel FM. 1999. Molecular mechanisms of bacterial virulence elucidated using a Pseudomonas aeruginosa-Caenorhabditis elegans pathogenesis model. Cell 96: 47-56.
-
(1999)
Cell
, vol.96
, pp. 47-56
-
-
Mahajan-Miklos, S.1
Tan, M.-W.2
Rahme, L.G.3
Ausubel, F.M.4
-
23
-
-
33847749371
-
Efficient high-resolution deletion discovery in Caenorhabditis elegans by array comparative hybridization
-
Maydan JS, Flibotte S, Edgley ML, Lau J, Selzer RR, Richmond TA, Pofahl NJ, Thomas JH, Moerman DG. 2007. Efficient high-resolution deletion discovery in Caenorhabditis elegans by array comparative hybridization. Genome Res 17: 337-347.
-
(2007)
Genome Res
, vol.17
, pp. 337-347
-
-
Maydan, J.S.1
Flibotte, S.2
Edgley, M.L.3
Lau, J.4
Selzer, R.R.5
Richmond, T.A.6
Pofahl, N.J.7
Thomas, J.H.8
Moerman, D.G.9
-
24
-
-
0842267618
-
Comparing genomic expression patterns across species identifies shared transcriptional profile in aging
-
McCarroll SA, Murphy CT, Zou S, Pletcher SD, Chin CS, Jan YN, Kenyon C, Bargmann CI, Li H. 2004. Comparing genomic expression patterns across species identifies shared transcriptional profile in aging. Nat Genet 36: 197-204.
-
(2004)
Nat Genet
, vol.36
, pp. 197-204
-
-
McCarroll, S.A.1
Murphy, C.T.2
Zou, S.3
Pletcher, S.D.4
Chin, C.S.5
Jan, Y.N.6
Kenyon, C.7
Bargmann, C.I.8
Li, H.9
-
25
-
-
50049085799
-
Molecular basis of the copulatory plug polymorphism in Caenorhabditis elegans
-
Palopoli MF, Rockman MV, TinMaung A, Ramsay C, Curwen S, Aduna A, Laurita J, Kruglyak L. 2008. Molecular basis of the copulatory plug polymorphism in Caenorhabditis elegans. Nature 454: 1019-1022.
-
(2008)
Nature
, vol.454
, pp. 1019-1022
-
-
Palopoli, M.F.1
Rockman, M.V.2
TinMaung, A.3
Ramsay, C.4
Curwen, S.5
Aduna, A.6
Laurita, J.7
Kruglyak, L.8
-
26
-
-
33750481513
-
Heritability and tissue specificity of expression quantitative trait loci
-
doi: 10.1371/journal.pgen.0020172
-
Petretto E, Mangion J, Dickens NJ, Cook SA, Kumaran MK, Lu H, Fischer J, Maatz H, Kren V, Pravenec M, et al. 2006. Heritability and tissue specificity of expression quantitative trait loci. PLoS Genet 2: e172. doi: 10.1371/journal.pgen.0020172.
-
(2006)
PLoS Genet
, vol.2
-
-
Petretto, E.1
Mangion, J.2
Dickens, N.J.3
Cook, S.A.4
Kumaran, M.K.5
Lu, H.6
Fischer, J.7
Maatz, H.8
Kren, V.9
Pravenec, M.10
-
28
-
-
33750204290
-
Genetics of global gene expression
-
Rockman MV, Kruglyak L. 2006. Genetics of global gene expression. Nat Rev Genet 7: 862-872.
-
(2006)
Nat Rev Genet
, vol.7
, pp. 862-872
-
-
Rockman, M.V.1
Kruglyak, L.2
-
29
-
-
0037456823
-
Genetics of gene expression surveyed in maize, mouse and man
-
Schadt EE, Monks SA, Drake TA, Lusis AJ, Che N, Colinayo V, Ruff TG, Milligan SB, Lamb JR, Cavet G, et al. 2003. Genetics of gene expression surveyed in maize, mouse and man. Nature 422: 297-302.
-
(2003)
Nature
, vol.422
, pp. 297-302
-
-
Schadt, E.E.1
Monks, S.A.2
Drake, T.A.3
Lusis, A.J.4
Che, N.5
Colinayo, V.6
Ruff, T.G.7
Milligan, S.B.8
Lamb, J.R.9
Cavet, G.10
-
30
-
-
45149108420
-
Mapping the genetic architecture of gene expression in human liver
-
doi: 10.1371/ journal.pbio.0060107
-
Schadt E, Molony C, Chudin E, Hao K, Yang X, Lum PY, Kasarskis A, Zhang B, Wang S, Suver C, et al. 2008. Mapping the genetic architecture of gene expression in human liver. PLoS Biol 6: e107. doi: 10.1371/ journal.pbio. 0060107.
-
(2008)
PLoS Biol
, vol.6
-
-
Schadt, E.1
Molony, C.2
Chudin, E.3
Hao, K.4
Yang, X.5
Lum, P.Y.6
Kasarskis, A.7
Zhang, B.8
Wang, S.9
Suver, C.10
-
31
-
-
38849199286
-
Widespread genetic incompatibility in C. elegans maintained by balancing selection
-
Seidel HS, Rockman MV, Kruglyak L. 2008. Widespread genetic incompatibility in C. elegans maintained by balancing selection. Science 319: 589-594.
-
(2008)
Science
, vol.319
, pp. 589-594
-
-
Seidel, H.S.1
Rockman, M.V.2
Kruglyak, L.3
-
32
-
-
43249129715
-
Gene-environment interaction in yeast gene expression
-
doi: 10.1371/journal.pbio.0060083
-
Smith EN, Kruglyak L. 2008. Gene-environment interaction in yeast gene expression. PLoS Biol 6: e83. doi: 10.1371/journal.pbio.0060083.
-
(2008)
PLoS Biol
, vol.6
-
-
Smith, E.N.1
Kruglyak, L.2
-
33
-
-
33646549289
-
Gene expression becomes heterogeneous with age
-
Somel M, Khaitovich P, Bahn S, Pääbo S, Lachmann M. 2006. Gene expression becomes heterogeneous with age. Curr Biol 16: R359-R360.
-
(2006)
Curr Biol
, vol.16
-
-
Somel, M.1
Khaitovich, P.2
Bahn, S.3
Pääbo, S.4
Lachmann, M.5
-
34
-
-
74249118093
-
Aging mice show a decreasing correlation of gene expression within genetic modules
-
doi: 10.1371/journal.pgen.1000776
-
Southworth LK, Owen AB, Kim SK. 2009. Aging mice show a decreasing correlation of gene expression within genetic modules. PLoS Genet 5: e1000776. doi: 10.1371/journal.pgen.1000776.
-
(2009)
PLoS Genet
, vol.5
-
-
Southworth, L.K.1
Owen, A.B.2
Kim, S.K.3
-
35
-
-
34547631266
-
Temporal and spatial transcriptional profiles of aging in Drosophila melanogaster
-
Zhan M, Yamaza H, Sun Y, Sinclair J, Li H, and Zou S. 2007. Temporal and spatial transcriptional profiles of aging in Drosophila melanogaster. Genome Res 17: 1236-1243.
-
(2007)
Genome Res
, vol.17
, pp. 1236-1243
-
-
Zhan, M.1
Yamaza, H.2
Sun, Y.3
Sinclair, J.4
Li, H.5
Zou, S.6
-
36
-
-
4444232822
-
ATP-binding cassette protein e is involved in gene transcription and translation in Caenorhabditis elegans
-
DOI 10.1016/j.bbrc.2004.08.068, PII S0006291X04018054
-
Zhao Z, Fang LL, Johnsen R, Baillie DL. 2004. ATP-binding cassette protein E is involved in gene transcription and translation in Caenorhabditis elegans. Biochem Biophys Res Commun 323: 104-111. (Pubitemid 39200656)
-
(2004)
Biochemical and Biophysical Research Communications
, vol.323
, Issue.1
, pp. 104-111
-
-
Zhao, Z.1
Fang, L.L.2
Johnsen, R.3
Baillie, D.L.4
|