-
1
-
-
33847076849
-
Chromatin modifications and their function
-
Kouzarides T. Chromatin modifications and their function. Cell 2007, 128:693-705.
-
(2007)
Cell
, vol.128
, pp. 693-705
-
-
Kouzarides, T.1
-
2
-
-
0035839136
-
Translating the histone code
-
Jenuwein T., Allis C.D. Translating the histone code. Science 2001, 293:1074-1080.
-
(2001)
Science
, vol.293
, pp. 1074-1080
-
-
Jenuwein, T.1
Allis, C.D.2
-
3
-
-
0034610814
-
The language of covalent histone modifications
-
Strahl B.D., Allis C.D. The language of covalent histone modifications. Nature 2000, 403:41-45.
-
(2000)
Nature
, vol.403
, pp. 41-45
-
-
Strahl, B.D.1
Allis, C.D.2
-
4
-
-
77649246145
-
Histone modification levels are predictive for gene expression
-
Karlic R., Chung H.R., Lasserre J., Vlahovicek K., Vingron M. Histone modification levels are predictive for gene expression. Proc. Natl. Acad. Sci. USA 2010, 107:2926-2931.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 2926-2931
-
-
Karlic, R.1
Chung, H.R.2
Lasserre, J.3
Vlahovicek, K.4
Vingron, M.5
-
5
-
-
33845786515
-
The control of histone lysine methylation in epigenetic regulation
-
Volkel P., Angrand P.O. The control of histone lysine methylation in epigenetic regulation. Biochimie 2007, 89:1-20.
-
(2007)
Biochimie
, vol.89
, pp. 1-20
-
-
Volkel, P.1
Angrand, P.O.2
-
6
-
-
44149105533
-
The emerging functions of histone demethylases
-
Agger K., Christensen J., Cloos P.A., Helin K. The emerging functions of histone demethylases. Curr. Opin. Genet. Dev. 2008, 18:159-168.
-
(2008)
Curr. Opin. Genet. Dev.
, vol.18
, pp. 159-168
-
-
Agger, K.1
Christensen, J.2
Cloos, P.A.3
Helin, K.4
-
7
-
-
59349100985
-
Dynamic protein methylation in chromatin biology
-
Ng S.S., Yue W.W., Oppermann U., Klose R.J. Dynamic protein methylation in chromatin biology. Cell. Mol. Life Sci. 2009, 66:407-422.
-
(2009)
Cell. Mol. Life Sci.
, vol.66
, pp. 407-422
-
-
Ng, S.S.1
Yue, W.W.2
Oppermann, U.3
Klose, R.J.4
-
8
-
-
77949432014
-
PHF8, a gene associated with cleft lip/palate and mental retardation, encodes for an N{varepsilon}-dimethyl lysine demethylase
-
Loenarz C., Ge W., Coleman M.L., Rose N.R., Cooper C.D., Klose R.J., Ratcliffe P.J., Schofield C.J. PHF8, a gene associated with cleft lip/palate and mental retardation, encodes for an N{varepsilon}-dimethyl lysine demethylase. Hum. Mol. Genet. 2010, 19:217-222.
-
(2010)
Hum. Mol. Genet.
, vol.19
, pp. 217-222
-
-
Loenarz, C.1
Ge, W.2
Coleman, M.L.3
Rose, N.R.4
Cooper, C.D.5
Klose, R.J.6
Ratcliffe, P.J.7
Schofield, C.J.8
-
9
-
-
0035370439
-
Histone methylation versus histone acetylation: new insights into epigenetic regulation
-
Rice J.C., Allis C.D. Histone methylation versus histone acetylation: new insights into epigenetic regulation. Curr. Opin. Cell Biol. 2001, 13:263-273.
-
(2001)
Curr. Opin. Cell Biol.
, vol.13
, pp. 263-273
-
-
Rice, J.C.1
Allis, C.D.2
-
10
-
-
11144332565
-
Histone demethylation mediated by the nuclear amine oxidase homolog LSD1
-
Shi Y., Lan F., Matson C., Mulligan P., Whetstine J.R., Cole P.A., Casero R.A., Shi Y. Histone demethylation mediated by the nuclear amine oxidase homolog LSD1. Cell 2004, 119:941-953.
-
(2004)
Cell
, vol.119
, pp. 941-953
-
-
Shi, Y.1
Lan, F.2
Matson, C.3
Mulligan, P.4
Whetstine, J.R.5
Cole, P.A.6
Casero, R.A.7
Shi, Y.8
-
11
-
-
32844454603
-
Histone demethylation by a family of JmjC domain-containing proteins
-
Tsukada Y., Fang J., Erdjument-Bromage H., Warren M.E., Borchers C.H., Tempst P., Zhang Y. Histone demethylation by a family of JmjC domain-containing proteins. Nature 2006, 439:811-816.
-
(2006)
Nature
, vol.439
, pp. 811-816
-
-
Tsukada, Y.1
Fang, J.2
Erdjument-Bromage, H.3
Warren, M.E.4
Borchers, C.H.5
Tempst, P.6
Zhang, Y.7
-
12
-
-
33947513027
-
Regulation of histone methylation by demethylimination and demethylation
-
Klose R.J., Zhang Y. Regulation of histone methylation by demethylimination and demethylation. Nat. Rev. Mol. Cell Biol. 2007, 8:307-318.
-
(2007)
Nat. Rev. Mol. Cell Biol.
, vol.8
, pp. 307-318
-
-
Klose, R.J.1
Zhang, Y.2
-
13
-
-
39349105090
-
Expanding chemical biology of 2-oxoglutarate oxygenases
-
Loenarz C., Schofield C.J. Expanding chemical biology of 2-oxoglutarate oxygenases. Nat. Chem. Biol. 2008, 4:152-156.
-
(2008)
Nat. Chem. Biol.
, vol.4
, pp. 152-156
-
-
Loenarz, C.1
Schofield, C.J.2
-
14
-
-
54449100397
-
Evidence that two enzyme-derived histidine ligands are sufficient for iron binding and catalysis by factor inhibiting HIF (FIH)
-
Hewitson K.S., Holmes S.L., Ehrismann D., Hardy A.P., Chowdhury R., Schofield C.J., McDonough M.A. Evidence that two enzyme-derived histidine ligands are sufficient for iron binding and catalysis by factor inhibiting HIF (FIH). J. Biol. Chem. 2008, 283:25971-25978.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 25971-25978
-
-
Hewitson, K.S.1
Holmes, S.L.2
Ehrismann, D.3
Hardy, A.P.4
Chowdhury, R.5
Schofield, C.J.6
McDonough, M.A.7
-
15
-
-
33646124469
-
Reversal of histone lysine trimethylation by the JMJD2 family of histone demethylases
-
Whetstine J.R., Nottke A., Lan F., Huarte M., Smolikov S., Chen Z., Spooner E., Li E., Zhang G., Colaiacovo M., Shi Y. Reversal of histone lysine trimethylation by the JMJD2 family of histone demethylases. Cell 2006, 125:467-481.
-
(2006)
Cell
, vol.125
, pp. 467-481
-
-
Whetstine, J.R.1
Nottke, A.2
Lan, F.3
Huarte, M.4
Smolikov, S.5
Chen, Z.6
Spooner, E.7
Li, E.8
Zhang, G.9
Colaiacovo, M.10
Shi, Y.11
-
16
-
-
35148867907
-
UTX and JMJD3 are histone H3K27 demethylases involved in HOX gene regulation and development
-
Agger K., Cloos P.A., Christensen J., Pasini D., Rose S., Rappsilber J., Issaeva I., Canaani E., Salcini A.E., Helin K. UTX and JMJD3 are histone H3K27 demethylases involved in HOX gene regulation and development. Nature 2007, 449:731-734.
-
(2007)
Nature
, vol.449
, pp. 731-734
-
-
Agger, K.1
Cloos, P.A.2
Christensen, J.3
Pasini, D.4
Rose, S.5
Rappsilber, J.6
Issaeva, I.7
Canaani, E.8
Salcini, A.E.9
Helin, K.10
-
17
-
-
34547471432
-
Structural basis of the recognition of a methylated histone tail by JMJD2A
-
Chen Z., Zang J., Kappler J., Hong X., Crawford F., Wang Q., Lan F., Jiang C., Whetstine J., Dai S., Hansen K., Shi Y., Zhang G. Structural basis of the recognition of a methylated histone tail by JMJD2A. Proc. Natl. Acad. Sci. USA 2007, 104:10818-10823.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 10818-10823
-
-
Chen, Z.1
Zang, J.2
Kappler, J.3
Hong, X.4
Crawford, F.5
Wang, Q.6
Lan, F.7
Jiang, C.8
Whetstine, J.9
Dai, S.10
Hansen, K.11
Shi, Y.12
Zhang, G.13
-
18
-
-
34447133035
-
Crystal structures of histone demethylase JMJD2A reveal basis for substrate specificity
-
Ng S.S., Kavanagh K.L., McDonough M.A., Butler D., Pilka E.S., Lienard B.M., Bray J.E., Savitsky P., Gileadi O., von Delft F., Rose N.R., Offer J., Scheinost J.C., Borowski T., Sundstrom M., Schofield C.J., Oppermann U. Crystal structures of histone demethylase JMJD2A reveal basis for substrate specificity. Nature 2007, 448:87-91.
-
(2007)
Nature
, vol.448
, pp. 87-91
-
-
Ng, S.S.1
Kavanagh, K.L.2
McDonough, M.A.3
Butler, D.4
Pilka, E.S.5
Lienard, B.M.6
Bray, J.E.7
Savitsky, P.8
Gileadi, O.9
von Delft, F.10
Rose, N.R.11
Offer, J.12
Scheinost, J.C.13
Borowski, T.14
Sundstrom, M.15
Schofield, C.J.16
Oppermann, U.17
-
19
-
-
56749151276
-
Inhibitor scaffolds for 2-oxoglutarate-dependent histone lysine demethylases
-
Rose N.R., Ng S.S., Mecinovic J., Lienard B.M., Bello S.H., Sun Z., McDonough M.A., Oppermann U., Schofield C.J. Inhibitor scaffolds for 2-oxoglutarate-dependent histone lysine demethylases. J. Med. Chem. 2008, 51:7053-7056.
-
(2008)
J. Med. Chem.
, vol.51
, pp. 7053-7056
-
-
Rose, N.R.1
Ng, S.S.2
Mecinovic, J.3
Lienard, B.M.4
Bello, S.H.5
Sun, Z.6
McDonough, M.A.7
Oppermann, U.8
Schofield, C.J.9
-
20
-
-
77449127237
-
Enzymatic and structural insights for substrate specificity of a family of Jumonji histone lysine demethylases
-
Horton J.R., Upadhyay A.K., Qi H.H., Zhang X., Shi Y., Cheng X. Enzymatic and structural insights for substrate specificity of a family of Jumonji histone lysine demethylases. Nat. Struct. Mol. Biol. 2010, 17:38-43.
-
(2010)
Nat. Struct. Mol. Biol.
, vol.17
, pp. 38-43
-
-
Horton, J.R.1
Upadhyay, A.K.2
Qi, H.H.3
Zhang, X.4
Shi, Y.5
Cheng, X.6
-
21
-
-
77149164783
-
Monitoring the activity of 2-oxoglutarate dependent histone demethylases by NMR spectroscopy: direct observation of formaldehyde
-
Hopkinson R.J., Hamed R.B., Rose N.R., Claridge T.D., Schofield C.J. Monitoring the activity of 2-oxoglutarate dependent histone demethylases by NMR spectroscopy: direct observation of formaldehyde. ChemBioChem 2010, 11:506-510.
-
(2010)
ChemBioChem
, vol.11
, pp. 506-510
-
-
Hopkinson, R.J.1
Hamed, R.B.2
Rose, N.R.3
Claridge, T.D.4
Schofield, C.J.5
-
22
-
-
34547688895
-
Specificity and mechanism of JMJD2A, a trimethyllysine-specific histone demethylase,
-
Couture J.F., Collazo E., Ortiz-Tello P.A., Brunzelle J.S., Trievel R.C. Specificity and mechanism of JMJD2A, a trimethyllysine-specific histone demethylase,. Nat. Struct. Mol. Biol. 2007, 14:689-695.
-
(2007)
Nat. Struct. Mol. Biol.
, vol.14
, pp. 689-695
-
-
Couture, J.F.1
Collazo, E.2
Ortiz-Tello, P.A.3
Brunzelle, J.S.4
Trievel, R.C.5
-
23
-
-
67650506936
-
Open access chemical and clinical probes to support drug discovery
-
Edwards A.M., Bountra C., Kerr D.J., Willson T.M. Open access chemical and clinical probes to support drug discovery. Nat. Chem. Biol. 2009, 5:436-440.
-
(2009)
Nat. Chem. Biol.
, vol.5
, pp. 436-440
-
-
Edwards, A.M.1
Bountra, C.2
Kerr, D.J.3
Willson, T.M.4
-
24
-
-
77649224314
-
Selective inhibitors of the JMJD2 histone demethylases: combined nondenaturing mass spectrometric screening and crystallographic approaches
-
Rose N.R., Woon E.C., Kingham G.L., King O.N., Mecinovic J., Clifton I.J., Ng S.S., Talib-Hardy J., Oppermann U., McDonough M.A., Schofield C.J. Selective inhibitors of the JMJD2 histone demethylases: combined nondenaturing mass spectrometric screening and crystallographic approaches. J. Med. Chem. 2010, 53:1810-1818.
-
(2010)
J. Med. Chem.
, vol.53
, pp. 1810-1818
-
-
Rose, N.R.1
Woon, E.C.2
Kingham, G.L.3
King, O.N.4
Mecinovic, J.5
Clifton, I.J.6
Ng, S.S.7
Talib-Hardy, J.8
Oppermann, U.9
McDonough, M.A.10
Schofield, C.J.11
-
25
-
-
0028276006
-
Luminescent oxygen channeling immunoassay: measurement of particle binding kinetics by chemiluminescence
-
Ullman E.F., Kirakossian H., Singh S., Wu Z.P., Irvin B.R., Pease J.S., Switchenko A.C., Irvine J.D., Dafforn A., Skold C.N., et al. Luminescent oxygen channeling immunoassay: measurement of particle binding kinetics by chemiluminescence. Proc. Natl. Acad. Sci. USA 1994, 91:5426-5430.
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 5426-5430
-
-
Ullman, E.F.1
Kirakossian, H.2
Singh, S.3
Wu, Z.P.4
Irvin, B.R.5
Pease, J.S.6
Switchenko, A.C.7
Irvine, J.D.8
Dafforn, A.9
Skold, C.N.10
-
26
-
-
0037449811
-
Structure of factor-inhibiting hypoxia-inducible factor (HIF) reveals mechanism of oxidative modification of HIF-1α
-
Elkins J.M., Hewitson K.S., McNeill L.A., Seibel J.F., Schlemminger I., Pugh C.W., Ratcliffe P.J., Schofield C.J. Structure of factor-inhibiting hypoxia-inducible factor (HIF) reveals mechanism of oxidative modification of HIF-1α. J. Biol. Chem. 2003, 278:1802-1806.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 1802-1806
-
-
Elkins, J.M.1
Hewitson, K.S.2
McNeill, L.A.3
Seibel, J.F.4
Schlemminger, I.5
Pugh, C.W.6
Ratcliffe, P.J.7
Schofield, C.J.8
-
27
-
-
75749150081
-
A miniaturized screen for inhibitors of Jumonji histone demethylases
-
Sakurai M., Rose N.R., Schultz L., Quinn A.M., Jadhav A., Ng S.S., Oppermann U., Schofield C.J., Simeonov A. A miniaturized screen for inhibitors of Jumonji histone demethylases. Mol. Biosyst. 2009, 6:357-364.
-
(2009)
Mol. Biosyst.
, vol.6
, pp. 357-364
-
-
Sakurai, M.1
Rose, N.R.2
Schultz, L.3
Quinn, A.M.4
Jadhav, A.5
Ng, S.S.6
Oppermann, U.7
Schofield, C.J.8
Simeonov, A.9
-
28
-
-
77949351403
-
Screening for inhibitors of low-affinity epigenetic peptide-protein interactions: an AlphaScreen-based assay for antagonists of methyl-lysine binding proteins
-
Wigle T.J., Herold J.M., Senisterra G.A., Vedadi M., Kireev D.B., Arrowsmith C.H., Frye S.V., Janzen W.P. Screening for inhibitors of low-affinity epigenetic peptide-protein interactions: an AlphaScreen-based assay for antagonists of methyl-lysine binding proteins. J. Biomol. Screen. 2010, 15:62-71.
-
(2010)
J. Biomol. Screen.
, vol.15
, pp. 62-71
-
-
Wigle, T.J.1
Herold, J.M.2
Senisterra, G.A.3
Vedadi, M.4
Kireev, D.B.5
Arrowsmith, C.H.6
Frye, S.V.7
Janzen, W.P.8
-
29
-
-
77951161223
-
A homogeneous method for investigation of methylation-dependent protein-protein interactions in epigenetics
-
Quinn A.M., Bedford M.T., Espejo A., Spannhoff A., Austin C.P., Oppermann U., Simeonov A. A homogeneous method for investigation of methylation-dependent protein-protein interactions in epigenetics. Nucleic Acids Res. 2010, 38:e11.
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Quinn, A.M.1
Bedford, M.T.2
Espejo, A.3
Spannhoff, A.4
Austin, C.P.5
Oppermann, U.6
Simeonov, A.7
-
30
-
-
77954083259
-
-
PerkinElmer, A Practical Guide to Working with AlphaScreen, PerkinElmer, Boston,
-
PerkinElmer, A Practical Guide to Working with AlphaScreen, PerkinElmer, Boston, 2004.
-
(2004)
-
-
-
31
-
-
33644840499
-
Solution structure of the SWIRM domain of human histone demethylase LSD1
-
Tochio N., Umehara T., Koshiba S., Inoue M., Yabuki T., Aoki M., Seki E., Watanabe S., Tomo Y., Hanada M., Ikari M., Sato M., Terada T., Nagase T., Ohara O., Shirouzu M., Tanaka A., Kigawa T., Yokoyama S. Solution structure of the SWIRM domain of human histone demethylase LSD1. Structure 2006, 14:457-468.
-
(2006)
Structure
, vol.14
, pp. 457-468
-
-
Tochio, N.1
Umehara, T.2
Koshiba, S.3
Inoue, M.4
Yabuki, T.5
Aoki, M.6
Seki, E.7
Watanabe, S.8
Tomo, Y.9
Hanada, M.10
Ikari, M.11
Sato, M.12
Terada, T.13
Nagase, T.14
Ohara, O.15
Shirouzu, M.16
Tanaka, A.17
Kigawa, T.18
Yokoyama, S.19
|