Ascertaining clonal fidelity of tissue culture raised plants of Bambusa balcooa Roxb. using inter simple sequence repeat markers

New Forests

Volumn 40, Issue 1, 2010, Pages 1-8

  Negi, Divya ^a   Saxena, Sanjay ^b  

^a TERI UNIVERSITY   (India)

^b THE ENERGY AND RESOURCES INSTITUTE   (India)

Author keywords

Axillary branching; Bambusa balcooa; Clonal fidelity; ISSR; Somaclonal variation

Indexed keywords

AMPLICONS; BAMBUSA BALCOOA; GENETIC STABILITY; GENETIC VARIATION; IN-VITRO; INTER-SIMPLE SEQUENCE REPEATS; MOTHER PLANT; PLANT TISSUE CULTURE; PLANTLETS; REGENERANTS; SOMACLONAL VARIATION;

GENES; TISSUE; TISSUE CULTURE;

BAMBOO;

BAMBOO; BIOASSAY; CLONAL GROWTH; GENETIC MARKER; GENETIC VARIATION; GENETICALLY MODIFIED ORGANISM;

BAMBUSA; BAMBUSA BALCOOA;

EID: 77953699968     PISSN: 01694286     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11056-009-9182-3     Document Type: Article

References (37)

1. Arya S, Rana PK, Sharma S, Kaur R, Arya ID (1999) Micropropagation of Dendrocalamus asper by shoot proliferation using seeds. Plant Cell Rep 18(10): 879-882.
2. Bindiya K, Kanwar K (2003) Random amplified polymorphic DNA (RAPDs) markers for genetic analysis in micropropagated plants of Robinia pseudoacacia L. Euphytica 132: 41-47.
3. Bopana N, Saxena S (2009) In vitro regeneration of clonally uniform plants of Crataeva magna: a high value medicinal tree by axillary branching method. New For 38(1): 53-65.
4. Bornet B, Branchard M (2001) Nonanchored inter simple sequence repeat (ISSR) markers: reproducible and specific tools for genome fingerprinting. Plant Mol Biol Rep 19: 209-215.
5. Das M, Pal A (2005a) Clonal propagation and production of genetically uniform regenerants from axillary meristems of adult bamboo. J Plant Biochem Biotechnol 14: 185-188.
6. Das M, Pal A (2005b) In vitro regeneration of B. balcooa Roxb.: factors affecting changes of morphogenetic competence in the axillary buds. Plant Cell Tissue Organ Cult 81(1): 109-112.
7. Doyle JJ, Doyle JL (1990) Isolation of plant DNA from fresh tissue. Focus 12: 13-15.
8. Feyissa T, Welander M, Negash L (2007) Genetic stability, ex vitro rooting and gene expression studies in Hagenia abyssinica. Biol Plant 51(1): 15-21.
9. Gupta M, Chyi YS, Romero-Severson J, Owen JL (1994) Amplification of DNA markers from evolutionary diverse genomes using single primers of simple-sequence repeats. Theor Appl Genet 89: 998-1006.
10. Jimenez VM, Castillo J, Tavares E, Guevara E, Montiel M (2007) In vitro propagation of the neo-tropical giant bamboo, Guadua angustifolia Kunth, through axillary shoot proliferation. Plant Cell Tissue Organ Cult 86: 389-395.
11. Joshi P, Dhawan V (2007) Assessment of genetic fidelity of micropropagated Swertia chirayita plantlets by ISSR marker assay. Biol Plant 51(1): 22-26.
12. Kaeppler SM, Phillips L (1993) DNA methylation and tissue culture-induced variation in plants. In Vitro Cell Dev Biol Plant 29: 125-130.
13. Larkin PJ, Scowcroft W (1981) Somaclonal variation-a novel source of variability from cell cultures for plant improvement. Theor Appl Genet 60: 197-214.
14. Leroy XJ, Leon K, Charles G, Branchard M (2000) Cauliflower somatic embryogenesis and analysis of regenerant stability by ISSRs. Plant Cell Rep 19(11): 1102-1107.
15. Leroy XJ, Leon K, Hily JM, Chaumeil P, Branchard M (2001) Detection of in vitro culture-induced instability through inter-simple sequence repeat analysis. Theor Appl Genet 102(6-7): 885-891.
16. Lorz H, Scowcroft WR (1983) Variability among plants and their progeny regenerated from protoplasts of Su/su heterozygotes of Nicotiana tabacum. Theor Appl Genet 66: 67-75.
17. Martins M, Sarmento D, Oliveira MM (2004) Genetic stability of micropropagated almond plantlets as assessed by RAPD and ISSR markers. Plant Cell Rep 23: 492-496.
18. Modgil M, Mahajan K, Chakrabarti DR, Sobti RC (2005) Molecular analysis of genetic stability in micropropagated and apple rootstock MM106. Sci Hortic 104: 151-160.
19. Murashige T, Skoog F (1962) A revised medium for rapid growth and bioassay with tobacco tissue cultures. Physiol Plant 15: 473-497.
20. Nagaoke T, Ogihara Y (1997) Applicability of inter-simple sequence repeat polymorphisms in wheat for use as DNA markers in comparison to RFLP and RAPD markers. Theor Appl Genet 94: 597-602.
21. Panda MK, Mohanty S, Subudhi E, Acharya L, Nayak S (2007) Assessment of genetic stability of micropropagated plants of Curcuma longa L. by cytophotometry and RAPD analyses. Int J Integr Biol 1(3): 189-195.
22. Rani V, Parida A, Raina SN (1995) Random amplified polymorphic DNA (RAPD) markers for genetic analysis in micropropagated plants of Populus deltoides Marsh. Plant Cell Rep 14(7): 459-462.
23. Ray T, Dutta I, Saha P, Das S, Roy SC (2006) Genetic stability of three economically important micropropagated banana (Musa spp.) cultivars of lower Indo-Gangetic plains, as assessed by RAPD and ISSR markers. Plant Cell Tissue Organ Cult 85(1): 11-21.
24. Sanchez de la Hoz MP, Davila JA, Loarce Y, Ferrer E (1996) Simple sequence repeat primers used in polymerase chain reaction amplifications to study genetic diversity in barley. Genome 39: 112-117.
25. Sankar AA, Moore GA (2001) Evaluation of inter-simple sequence repeat analysis for mapping in Citrus and extension of genetic linkage map. Theor Appl Genet 102: 206-214.
26. Sarangthem K, Singh TN (2003) Microbial bioconversion of metabolites from fermented succulent bamboo shoots into phytosterols. Curr Sci 84(12): 1544-1547.
27. Saxena S (1990) In vitro propagation of the bamboo (Bambusa tulda Roxb.) through shoot proliferation. Plant Cell Rep 9: 431-434.
28. Saxena S, Bhojwani SS (1993) In vitro clonal multiplication of 4-year-old plants of the bamboo Dendrocalamus longispathus Kurz. In Vitro Cell Dev Biol Plant 29: 135-142.
29. Shenoy VB, Vasil IK (1992) Biochemical and molecular analysis of plants derived from embryogenic tissue cultures of napiergrass (Pannisetum purpureum K. Schum). Theor Appl Genet 83: 947-955.
30. Tautz D (1989) Hypervariability of simple sequences as a general source for polymorphic DNA markers. Nucleic Acids Res 17(16): 6463-6471.
31. Tewari DN (1992) A monograph on bamboo. International book distributors, Dehradun.
32. Tremblay L, Levasseur C, Tremblay FM (1999) Frequency of somaclonal variation in plants of black spruce (Picea mariana, Pinaceae) and white spruce (P. glauca, Pinaceae) derived from somatic embryogenesis and identification of some factors involved in genetic instability. Am J Bot 86(10): 1373-1381.
33. Tsumara Y, Ohba K, Strauss SH (1996) Diversity and inheritance of inter-simple sequence repeat polymorphisms in Douglas-fir (Pseudotsuga menziesii) and sugi (Cryptomeria japonica). Theor Appl Genet 92: 40-45.
34. Wang GR, Mahalingan R, Knap HT (1998) (C-A) and (G-A) anchored simple sequence repeats (ASSRs) generated polymorphism in soybean, Glycine max (L.) Merr. Theor Appl Genet 96: 1086-1096.
35. Weber JL, May PE (1989) Abundant class of human DNA polymorphisms which can be typed using the polymerase chain reaction. Am J Hum Genet 44: 388-396.
36. Yang H, Tabei Y, Kamada H, Kayano T, Takaiwa F (1999) Detection of somaclonal variation in cultured rice cells using digoxigenin-based random amplified polymorphic DNA. Plant Cell Rep 18: 520-526.
37. Zietkiewicz E, Rafalski A, Labuda D (1994) Genome fingerprinting by simple sequence repeats (SSR)-anchored polymerase chain reaction amplification. Genomics 20: 176-183.