Assessment of genetic fidelity of micropropagated Swertia chirayita plantlets by ISSR marker assay

Biologia Plantarum

Volumn 51, Issue 1, 2007, Pages 22-26

  Joshi, P ^a   Dhawan, V ^a  

^a TERI UNIVERSITY   (India)

Author keywords

Axillary multiplication; Conservation; Endangered medicinal plant; Molecular markers; Somaclonal variations

Indexed keywords

SWERTIA;

EID: 33947499603     PISSN: 00063134     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10535-007-0005-0     Document Type: Article

References (34)

1. Carvalho, L.C., Goulao, L., Oliveira, C., Goncalves, J.C., Amancio, S.: RAPD assessment for clonal and genetic stability of in vitro propagated chestnut hybrids. - Plant Cell Tissue Organ Cult. 77: 23-27, 2004.
2. Chowdari, K.V., Ramakrishna, W., Tamhankar, S.A., Hendre, R.R., Gupta, V.S., Sahasrabudhe, N.A., Ranjekar, P.K.: Identification of minor DNA variations in rice somaclonal variants. - Plant Cell Rep. 18: 55-58, 1998.
3. Devarumath, R., Nandy, S., Rani, V., Marimuthu, S., Muraleedharan, N., Raina, S. RAPD, ISSR and RFLP fingerprints as useful markers to evaluate genetic integrity of micropropagated plants of three diploid and triploid elite tea clones representing Camellia sinensis (China type) and C. assamica ssp. assamica (Assam-India type). - Plant Cell Rep. 21: 166-173, 2002.
4. Doyle, J.J., Doyle, J.L.: Isolation of plant DNA from fresh tissue. - Focus 12: 13-15 1990.
5. Fang, D.Q., Roose, M.L.: Identification of closely related citrus cultivars with inter-simple sequence repeat markers. - Theor. appl. Genet. 95: 408-417, 1997.
6. Goto, S., Thakur, R.C., Ishii, K.: Determination of genetic stability in long-term micropropagated shoots of Pinus thunbergii Parl. using RAPD markers. - Plant Cell Rep. 18: 193-197, 1998.
7. Gupta, M., Chyi, Y.S., Romero-Severson, J., Owen, J.L.: Amplification of DNA markers from evolutionarily diverse genomes using single primers of simple sequence repeats. - Theor. appl. Genet. 89: 998-1006, 1994.
8. Hirochika, H.: Activation of tobacco transposons during tissue culture. - EMBO J. 12: 2521-2528, 1993.
9. Hirochika, H., Sugimoto, K., Otsuki, Y., Tsugawa, H., Kanda, M.: Retrotransposon of rice involved in mutations induced by tissue culture. - Proc. nat. Acad. Sci. USA 93: 7783-7788, 1996.
10. Hofmann, N.E., Raja, A., Nelson, R.L., Korban, S.S.: Mutagenesis of embryogeneic cultures of soybean and detecting polymorphism using RAPD markers. - Biol. Plant. 48: 173-177, 2004.
11. Kaeppler, S.M., Phillips, R.L.: Tissue culture-induced DNA methylation variation in maize. - Proc. nat. Acad. Sci. USA 90: 8773-8776, 1993.
12. Leroy, X.J., Leon, K., Charles, G., Branchard, M.: Cauliflower somatic embryogenesis and analysis of regenerant stability by ISSRs. - Plant Cell Rep. 19: 1102-1107, 2000.
13. Leroy, X.J., Leon, K., Hily, J.M., Chaumeil, P., Branchard, M.: Detection of in vitro culture-induced instability through inter-simple sequence repeat analysis. - Theor. appl. Genet. 102: 885-891, 2001.
14. Liu, Z.L., Han, F.P., Tan, M., Shan, X.H., Dong, Y.Z., Wang, X.Z., Fedak, G., Hao, S., Liu, B.: Activation of a rice endogenous retrotransposon Tos17 in tissue culture is accompanied by cytosine demethylation and causes heritable alteration in methylation pattern of flanking genomic regions. - Theor. appl. Genet. 109: 200-209, 2004.
15. Martins, M., Sarmento, D., Oliveira, M.M.: Genetic stability of micropropagated almond plantlets, as assessed by RAPD and ISSR markers. - Plant Cell Rep. 23: 492-496, 2004.
16. Matthes, M., Singh, R., Cheah, S.C., Karp, A.: Variation in oil palm Elaeis guineensis (Jacq.) tissue culture-derived regenerants revealed by AFLPs with methylation-sensitive enzymes. - Theor. appl. Genet. 102: 971-979, 2001.
17. Meyer, W., Michell, T.G., Freedman, E.Z., Vilgalys, R.: Hybridization probes for conventional DNA fingerprinting used as single primers in polymerase chain reaction to distinguish strains of Cryptococcus neoformans. - J. clin. Biol. 31: 2274-2280, 1993.
18. Morgante, M., Vogel, J.: Compound microsatellite primers for detection of genetic polymorphisms. - US Patent Appl. 08/326456, 1994.
19. Nagaoka, T., Ogihara, Y.: Applicability of inter-simple sequence repeat markers in wheat for use as DNA markers in comparison to RFLP and RAPD markers. - Theor. appl. Genet. 97: 597-602, 1997.
20. Palombi, M., Damiano, V.: Comparison between RAPD and SSR molecular markers in detecting genetic variation in kiwifruit (Actinidia deliciosa A. Chev). - Plant Cell Rep. 20: 1061-1066, 2002.
21. Phillips, R.L., Kaeppler, S.M., Olhoft, P.: Genetic instability of plant tissue cultures: Breakdown of normal controls. - Proc. nat. Acad. Sci. USA 91: 5222-5226, 1994.
22. Powell, W., Morgante, R., Andre, C., Hanafey, M., Vogel, J., Tingey, S., Rafalsky, A.: The comparison of RFLP, RAPD, AFLP and SSR (microsatellite) markers for germplasm analysis. - Mol. Breed. 2: 225-238, 1996.
23. Rahman, M., Rajora, O.: Microsatellite DNA somaclonal variation in micropropagated trembling aspen (Populus tremuloides). - Plant Cell Rep. 20: 531-536, 2001.
24. Salvi, N.D., George, L., Eapen, S.: Plant regeneration from the leaf base callus of turmeric and random amplified polymorphic DNA analysis of the regenerated plants. - Plant Cell Tissue Organ Cult. 66: 113-119, 2001.
25. Shu, Q.Y., Liu, G.S., Qi, D.M., Chu, C.C., Liu, J. Li, H.J.: An effective method for axillary bud culture and RAPD analysis of cloned plants in tetraploid black locust. - Plant Cell Rep. 22: 175-180, 2003.
26. Singh, A., Negi, M.S., Moses, V.K., Venkateswarlu, B., Srivastava, P.S., Lakshmikumaram, M.: Molecular analysis of micropropagated neem plants using AFLP markers for ascertaining clonal fidelity. - In vitro cell. dev. Biol. Plant 38: 519-521, 2002.
27. Singh, M., Saroop, J., Dhiman, B.: Detection of intra-clonal genetic variability in vegetatively propagated tea using RAPD markers. - Biol. Plant. 48: 113-115, 2004.
28. Tautz, D.: Hypervariability of simple sequences as a general source of polymorphic DNA markers. - Nucl. Acids Res. 17: 6463-6467, 1989.
29. Varshney, A., Lakshmikumaran, M., Srivastava, P.S., Dhawan, V.: Establishment of genetic fidelity of in vitro raised Lillium bulblets through RAPD markers. - In vitro cell. Dev. Biol. Plant 37: 227-231, 2001.
30. Vasil, I.K.: Developing cell and tissue culture systems for improvement of cereal and grass crops. - J. Plant Physiol. 128: 193-218, 1987.
31. Vendrame, W.A., Kochertm, G., Wetzstein, H.Y.: AFLP analysis of variation in pecan somatic embryos. - Plant Cell Rep. 18: 853-857, 1999.
32. Vyskot, B., Reich, J., Fajkus, J., Bedek, M., Soska, J.: Genome modifications in protoplast-derived tobacco plants: Contents of repetitive DNA sequences. - Biol. Plant. 33: 448-454, 1991.
33. Xu, M., Li. X., Korban, S.S.: DNA-methylation alterations and exchanges in vitro cellular differentiation in rose (Rosa hybrida L.). - Theor. appl. Genet. 109: 899-910, 2004.
34. Zietekiewicz, E., Rafalski, A., Labuda, D.: Genome fingerprinting by simple sequence repeats (SSR)-anchored polymerase chain reaction amplification. - Genomics 20: 176-183, 1994.