Diversity and inheritance of inter-simple sequence repeat polymorphisms in Douglas-fir (Pseudotsuga menziesii) and sugi (Cryptomeria japonica)

Theoretical and Applied Genetics

Volumn 92, Issue 1, 1996, Pages 40-45

  Tsumura, Y ^a   Ohba, K ^b   Strauss, S H ^c  

^a FORESTRY AND FOREST PRODUCTS RESEARCH INSTITUTE   (Japan)

^b UNIVERSITY OF TSUKUBA   (Japan)

^c OREGON STATE UNIVERSITY   (United States)

Author keywords

Conifers; Genome mapping; Microsatellite DNA; RAPD; Repetitive DNA

Indexed keywords

ABIES; CONIFEROPHYTA; CRYPTOMERIA JAPONICA; JAPONICA; PSEUDOTSUGA MENZIESII;

EID: 0029831359     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/BF00222949     Document Type: Article

References (27)

1. Bradshaw HD, Villar M, Watson BD, Otto KG, Steward S, Stettler RF (1994) Molecular genetics of growth and development in Populus. III. A genetic linkage map of a hybrid poplar composed of RFLP, STS, and RAPD markers. Theor Appl Genet 89:167-178
2. Brunsfeld SJ, Doltis PS, Soltis DE, Gadels PA, Quinn CJ, Strenge DD, Ranker TA (1994) Phylogenetic relationships among the genera of Taxodiaceae and Cupressaceae: evidence from rbcL sequences. Systematic Bot 19:253-262
3. Bucci G, Menozzi P (1990) Segregation analysis of random amplified polymorphic DNA (RAPD) markers in Picea abies Karst. Mol Ecol 2:227-232
4. Echt CS, Erdahl LA, McCoy J (1992) Genetic segregation of random amplified polymorphic DNA in diploid cultivated alfalfa. Genome 35:84-87
5. Gelfand DH (1989) Taq DNA polymerase. In: Erlich HA (ed) PCR technology: principles and application for DNA amplification. Stockton Press, New York, pp 17-22
6. Gupta M, Chyi Y-S, Romero-Severson J, Own JL (1994) Amplification of DNA markers from evolutionarily diverse genomes using single primers of simple-sequence repeats. Theor Appl Genet 89:998-1006
7. Haiward T, Stalker T, LaRue E, Kocher G (1992) Use of single-primer DNA amplifications in genetic studies of peanut (Arachis hypogaea L.) Plant Mol Biol 18:315-325
8. Hamada H, Petrino MG, Kakunaga T (1982) A novel repeated element with Z-DNA-forming potential is widely found in evolutionarily diverse eukaryotic genomes. Proc Natl Acad Sci USA 79:6465-6469
9. Lagercrantz U, Ellegren H, Andersson L (1993) The abundance of various polymorphic microsatellite motifs between plants and vertebrates. Nucleic Acid Res 21:1111-1115
10. Li P, Adams WT (1989) Range-wide patterns of allozyme variation in Douglas-fir (Pseudotsuga menziesii). Can J For Res 19:149-161
11. Litt M, Luty JA (1989) A hypervariable microsatellite revealed by in vitro amplification of a dinucleotide repeat within the cardiac muscle actin gene. Am J Hum Genet 44:397-401
12. Maniatis T, Frisch EF, Sambrook J (1982) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory, Cold Spring, New York
13. Moore SS, Sargeant LL, KingTJ, Mattick JS, Georges M, Hetzel DJS (1991) The conservation of dinucleotide microsatellites among mammalian genomes allows the use of heterologous PCR primer pairs in closely related species. Genomics 10:654-660
14. Mukai Y, Suyama Y, Tsumura Y, Kawahara T, Yoshimaru H, Kondo T, Tomaru T, Kuramoto T, Murai M (1995) A linkage map for sugi (Cryptomeriajaponica) based on RFLP, RAPD and isozyme loci. Theor Appl Genet 90:835-840
15. Neale DB, Harry DH (1994) Genetic mapping in firest trees: RFLPs, RAPDs and beyond. AgBiotech News Info 6:107N-114N
16. Nelson CD, Nance WL, Doudrick RL (1993) A partial genetic linkage map of slash pine (Pinus elliottii Engelm. var. elliottii) based on random amplified polymorphic DNAs. Theor Appl Genet 87:145-151
17. Reiter RS, Williams JGK, Feldmann KA, Rafalski JA, Tingey SV, Scolnik PA (1992) Global and local genome mapping in Arabidopsis thaliana by using recombinant inbred lines and random amplified polymorphic DNAs. Proc Natl Acad Sci USA 89:1477-1481
18. Saghai Maroof MA, Biyashev RM, Yang GP, Zhang Q, Allard RW (1994) Extraordinarily polymorphic microsatellite DNA in barley: species diversity, chromosomal locations, and population dynamics. Proc Natl Acad Sci USA 91:5466-5470
19. Schlotterer C, Amos B, Tautz D (1991) Conservation of polymorphic simple sequence loci in cetacean species. Nature 354:63-65
20. Sorensen FC (1979) Provenance variation in Pseudotsuga menziesii seedlings from the var. menziesii - var. glauca transition zone in Oregon. Silvae Genet 28:96-103
21. Strauss SH, Palmer JD, Howe GT, Doerksen AH (1988) Chloroplast genomes of two conifers lack a large inverted repeat and are extensively rearranged. Proc Natl Acad Sci USA 85: 3898-3902
22. Tsumura Y, Ogihara Y, Sasakuma T, Ohba K (1993) Physical map of chroloplast DNA in sugi, Cryptomeria japonica. Theor Appl Genet 86:166-172
23. Tulsieram LK, Glaubitz JC, Kiss G, Carlson JE (1992) Single-tree genetic linkage mapping in conifers using haploid DNA from megagametophytes. Bio/Technol 10:686-690
24. Wagner DB, Furnier GR, Saghai-Madroof MA, Williams SM, Cancik BP, Allard RW (1987) Chloroplast DNA polymorphisms in lodgepole and jack pines and their hybrids. Proc Natl Acad Sci USA 84:2097-2100
25. Wang Z, Weber JL, Zhong G, Tanksley SD (1994) Survey of plant short tandem DNA repeats. Theor Appl Genet 88:1-6
26. Weber JL, May PE (1989) Abundant class of human DNA polymorphisms which can typed using the polymerase chain reaction. Am J Hum Genet 44:388-396
27. Zietkiewicz E, Rafalski A, Labuda D (1994) Genome fingerprinting by simple sequence repeat (SSR)-anchored polymerase chain reaction amplification. Genomics 20:176-183