Compensations for diminished terminal oxidase activity in Escherichia coli: Cytochrome bd-II-mediated respiration and glutamate metabolism

Journal of Biological Chemistry

Volumn 285, Issue 24, 2010, Pages 18464-18472

  Shepherd, Mark ^a   Sanguinetti, Guido ^b   Cook, Gregory M ^c   Poole, Robert K ^a  

^a UNIVERSITY OF SHEFFIELD   (United Kingdom)

^b UNIVERSITY OF EDINBURGH   (United Kingdom)

^c UNIVERSITY OF OTAGO   (New Zealand)

Author keywords

[No Author keywords available]

Indexed keywords

AEROBIC RESPIRATORY CHAIN; AMINOBUTYRIC ACIDS; ANTIPORTS; CULTURE MEDIUM; E. COLI; GLYOXYLATE; IN-CELL; INTRACELLULAR PROTONS; L-GLUTAMATE; MUTANT STRAIN; OSMOTIC STRESS; PROTON-MOTIVE FORCES; QUINOL OXIDASE; QUINOL OXIDATION; REDUCTION OF OXYGEN; RESPIRATION RATE; SPECTROSCOPIC SIGNALS; TERMINAL OXIDASE; UBIQUINOL; UP-REGULATION; WILD TYPES;

ACID RESISTANCE; ACIDS; AMINO ACIDS; CELL CULTURE; ESCHERICHIA COLI; OXIDATION; OXYGEN; PHYSIOLOGY; PROTONS; TRANSCRIPTION; TRANSCRIPTION FACTORS;

STRAIN RATE;

4 AMINOBUTYRIC ACID; ADENOSINE TRIPHOSPHATE; ANTIPORTER; CYTOCHROME; CYTOCHROME BD I; CYTOCHROME BD II; CYTOCHROME BO'; CYTOCHROME D; GLUTAMIC ACID; GLYOXYLIC ACID; OXIDOREDUCTASE; OXYGEN; PROTON; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE; UNCLASSIFIED DRUG;

AMINO ACID METABOLISM; ARTICLE; BACTERIAL GROWTH; BACTERIAL METABOLISM; BACTERIUM MUTANT; CELL MOTILITY; CONTROLLED STUDY; CULTURE MEDIUM; ENZYME ACTIVITY; ESCHERICHIA COLI; GENE EXPRESSION REGULATION; METABOLIC STRESS; NONHUMAN; OSMOTIC STRESS; OXIDATION; PHENOTYPE; PRIORITY JOURNAL; PROTON MOTIVE FORCE; RESPIRATORY CHAIN; TRANSCRIPTION REGULATION; TRANSCRIPTOMICS;

CELL MOVEMENT; CELL RESPIRATION; CYTOCHROME D GROUP; CYTOCHROMES B; ELECTRODES; ESCHERICHIA COLI; GENE EXPRESSION REGULATION, BACTERIAL; GLUTAMATES; GLUTAMIC ACID; HYDROGEN-ION CONCENTRATION; KINETICS; MODELS, STATISTICAL; OXYGEN; OXYGEN CONSUMPTION; SPECTROPHOTOMETRY;

ESCHERICHIA COLI;

EID: 77953298121     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M110.118448     Document Type: Article

References (65)

1. Gennis, R. B. (1987) FEMS Microbiol. Rev. 46, 387-399
2. Trumpower, B. L., and Gennis, R. B. (1994) Ann. Rev. Biochem. 63, 675-716
3. Dassa, J., Fsihi, H., Marck, C., Dion, M., Kieffer-Bontemps, M., and Boquet, P. L. (1991) Mol. Gen. Genet. 229, 341-352
4. Sturr, M. G., Krulwich, T. A., and Hicks, D. B. (1996) J. Bacteriol. 178, 1742-1749
5. Ingledew, W. J., and Poole, R. K. (1984) Microbiol. Rev. 48, 222-271
6. Jünemann, S. (1997) Biochim. Biophys. Acta 1321, 107-127
7. Salerno, J. C., Bolgiano, B., and Ingledew, W. J. (1989) FEBS Lett. 247, 101-105
8. Mason, M. G., Shepherd, M., Nicholls, P., Dobbin, P. S., Dodsworth, K. S., Poole, R. K., and Cooper, C. E. (2009) Nat. Chem. Biol. 5, 94-96
9. D'mello, R., Hill, S., and Poole, R. K. (1996) Microbiology 142, 755-763
10. D'Mello, R., Hill, S., and Poole, R. K. (1995) J. Bacteriol. 177, 867-870
11. Gunsalus, R. P. (1992) J. Bacteriol. 174, 7069-7074
12. Iuchi, S., and Lin, E. C. (1991) Cell 66, 5-7
13. Salmon, K., Hung, S. P., Mekjian, K., Baldi, P., Hatfield, G. W., and Gunsalus, R. P. (2003) J. Biol. Chem. 278, 29837-29855
14. Salmon, K. A., Hung, S. P., Steffen, N. R., Krupp, R., Baldi, P., Hatfield, G. W., and Gunsalus, R. P. (2005) J. Biol. Chem. 280, 15084-15096
15. Ramseier, T. M., Chien, S. Y., and Saier, M. H., Jr. (1996) Curr. Microbiol. 33, 270-274
16. Atlung, T., Knudsen, K., Heerfordt, L., and Brøndsted, L. (1997) J. Bacteriol. 179, 2141-2146
17. Yamashino, T., Ueguchi, C., and Mizuno, T. (1995) EMBO J. 14, 594-602
18. Barth, M., Marschall, C., Muffler, A., Fischer, D., and Hengge-Aronis, R. (1995) J. Bacteriol. 177, 3455-3464
19. Atlung, T., Sund, S., Olesen, K., and Brøndsted, L. (1996) J. Bacteriol. 178, 3418-3425
20. Bekker, M., de Vries, S., Ter Beek, A., Hellingwerf, K. J., and Teixeira de Mattos, M. J. (2009) J. Bacteriol. 191, 5510-5517
21. Puustinen, A., Finel, M., Haltia, T., Gennis, R. B., and Wikström, M. (1991) Biochemistry 30, 3936-3942
22. Puustinen, A., Finel, M., Virkki, M., and Wikström, M. (1989) FEBS Lett. 249, 163-167
23. Wikström, M., Bogachev, A., Finel, M., Morgan, J. E., Puustinen, A., Raitio, M., Verkhovskaya, M., and Verkhovsky, M. I. (1994) Biochim. Biophys. Acta 1187, 106-111
24. Baba, T., Ara, T., Hasegawa, M., Takai, Y., Okumura, Y., Baba, M., Datsenko, K. A., Tomita, M., Wanner, B. L., and Mori, H. (2006) Mol. Syst. Biol. 2, 2006.0008
25. Datsenko, K. A., and Wanner, B. L. (2000) Proc. Natl. Acad. Sci. U.S.A. 97, 6640-6645
26. Flatley, J., Barrett, J., Pullan, S. T., Hughes, M. N., Green, J., and Poole, R. K. (2005) J. Biol. Chem. 280, 10065-10072
27. Pittman, M. S., Corker, H., Wu, G., Binet, M. B., Moir, A. J., and Poole, R. K. (2002) J. Biol. Chem. 277, 49841-49849
28. Poole, R. K., Williams, H. D., Downie, J. A., and Gibson, F. (1989) J. Gen. Microbiol. 135, 1865-1874
29. Kalnenieks, U., Galinina, N., Bringer-Meyer, S., and Poole, R. K. (1998) FEMS Microbiol. Lett. 168, 91-97
30. Markwell, M. A., Haas, S. M., Bieber, L. L., and Tolbert, N. E. (1978) Anal. Biochem. 87, 206-210
31. Gilberthorpe, N. J., and Poole, R. K. (2008) J. Biol. Chem. 283, 11146-11154
32. Sanguinetti, G., Lawrence, N. D., and Rattray, M. (2006) Bioinformatics 22, 2775-2781
33. Partridge, J. D., Sanguinetti, G., Dibden, D. P., Roberts, R. E., Poole, R. K., and Green, J. (2007) J. Biol. Chem. 282, 11230-11237
34. Davidge, K. S., Sanguinetti, G., Yee, C. H., Cox, A. G., McLeod, C. W., Monk, C. E., Mann, B. E., Motterlini, R., and Poole, R. K. (2009) J. Biol. Chem. 284, 4516-4524
35. Vogel, H. J., and Bonner, D. M. (1956) J. Biol. Chem. 218, 97-106
36. Castanie-Cornet, M. P., Penfound, T. A., Smith, D., Elliott, J. F., and Foster, J. W. (1999) J. Bacteriol. 181, 3525-3535
37. Riebeling, V., Thauer, R. K., and Jungermann, K. (1975) Eur. J. Biochem. 55, 445-453
38. Poole, R. K., Scott, R. I., and Chance, B. (1980) Biochim. Biophys. Acta 591, 471-482
39. Fu, H. A., Iuchi, S., and Lin, E. C. C. (1991) Mol. Gen. Genet. 226, 209-213
40. Andrade, S. L., Patridge, E. V., Ferry, J. G., and Einsle, O. (2007) J. Bacteriol. 189, 9101-9107
41. Capitani, G., De Biase, D., Aurizi, C., Gut, H., Bossa, F., and Grütter, M. G. (2003) EMBO J. 22, 4027-4037
42. Gut, H., Pennacchietti, E., John, R. A., Bossa, F., Capitani, G., De Biase, D., and Grütter, M. G. (2006) EMBO J. 25, 2643-2651
43. King, P. W., and Przybyla, A. E. (1999) J. Bacteriol. 181, 5250-5256
44. Gunasekera, T. S., Csonka, L. N., and Paliy, O. (2008) J. Bacteriol. 190, 3712-3720
45. Loewen, P. C., Switala, J., von Ossowski, I., Hillar, A., Christie, A., Tattrie, B., and Nicholls, P. (1993) Biochemistry 32, 10159-10164
46. Tramonti, A., Visca, P., De Canio, M., Falconi, M., and De Biase, D. (2002) J. Bacteriol. 184, 2603-2613
47. Giangrossi, M., Zattoni, S., Tramonti, A., De Biase, D., and Falconi, M. (2005) J. Biol. Chem. 280, 21498-21505
48. Masuda, N., and Church, G. M. (2003) Mol. Microbiol. 48, 699-712
49. Tramonti, A., De Canio, M., and De Biase, D. (2008) Mol. Microbiol. 70, 965-982
50. Rowbury, R. J. (1997) Lett. Appl. Microbiol. 24, 319-328
51. Nagarajavel, V., Madhusudan, S., Dole, S., Rahmouni, A. R., and Schnetz, K. (2007) J. Biol. Chem. 282, 23622-23630
52. Boulanger, A., Francez-Charlot, A., Conter, A., Castanié-Cornet, M. P., Cam, K., and Gutierrez, C. (2005) J. Bacteriol. 187, 3282-3286
53. McCann, M. P., Kidwell, J. P., and Matin, A. (1991) J. Bacteriol. 173, 4188-4194
54. Schellhorn, H. E., and Stones, V. L. (1992) J. Bacteriol. 174, 4769-4776
55. Dong, T., and Schellhorn, H. E. (2009) Mol. Genet. Genomics 281, 19-33
56. Soutourina, O. A., Krin, E., Laurent-Winter, C., Hommais, F., Danchin, A., and Bertin, P. N. (2002) Microbiology 148, 1543-1551
57. Nagakubo, S., Nishino, K., Hirata, T., and Yamaguchi, A. (2002) J. Bacteriol. 184, 4161-4167
58. Yamamoto, K., Ogasawara, H., and Ishihama, A. (2008) J. Biotechnol. 133, 196-200
59. Carey, J. (1988) Proc. Natl. Acad. Sci. U.S.A. 85, 975-979
60. Cotter, P. A., Chepuri, V., Gennis, R. B., and Gunsalus, R. P. (1990) J. Bacteriol. 172, 6333-6338
61. Kruse, T., Christensen, B., Raventas, D., Nielsen, A., Nielsen, J., Vukmirovic, N., and Kristensen, H. H. (2009) Int. J. Pept. Res. Ther. 15, 17-24
62. Schulz, A., Taggeselle, P., Tripier, D., and Bartsch, K. (1990) Appl. Environ. Microbiol. 56, 1-6
63. Yang, W., Ni, L., and Somerville, R. L. (1993) Proc. Natl. Acad. Sci. U.S.A. 90, 5796-5800
64. Morollo, A. A., and Bauerle, R. (1993) Proc. Natl. Acad. Sci. U.S.A. 90, 9983-9987
65. Richard, H., and Foster, J. W. (2004) J. Bacteriol. 186, 6032-6041