Crystallization and preliminary X-ray diffraction studies of a ferredoxin reductase component of carbazole 1,9a-dioxygenase from Novosphingobium sp. KA1

Acta Crystallographica Section F: Structural Biology and Crystallization Communications

Volumn 66, Issue 6, 2010, Pages 712-714

  Umeda, Takashi ^a   Katsuki, Junichi ^a   Ashikawa, Yuji ^a,b   Usami, Yusuke ^a   Inoue, Kengo ^a   Noguchi, Haruko ^a   Fujimoto, Zui ^c   Yamane, Hisakazu ^a   Nojiri, Hideaki ^a  

^a UNIVERSITY OF TOKYO   (Japan)

^b RIKEN HARIMA INSTITUTE   (Japan)

^c NATIONAL INSTITUTE OF AGROBIOLOGICAL SCIENCES   (Japan)

Author keywords

Carbazole; Ferredoxin reductases; Rieske nonhaem iron oxygenases

Indexed keywords

BACTERIAL PROTEIN; CARBAZOLE 1,9A DIOXYGENASE; CARBAZOLE 1,9A-DIOXYGENASE; DIOXYGENASE; FERREDOXIN NICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE REDUCTASE;

ARTICLE; CHEMISTRY; CRYSTALLIZATION; ENZYMOLOGY; SPHINGOMONADACEAE; X RAY CRYSTALLOGRAPHY;

BACTERIAL PROTEINS; CRYSTALLIZATION; CRYSTALLOGRAPHY, X-RAY; DIOXYGENASES; FERREDOXIN-NADP REDUCTASE; SPHINGOMONADACEAE;

NOVOSPHINGOBIUM;

EID: 77953166431     PISSN: 17443091     EISSN: 17443091     Source Type: Journal    
DOI: 10.1107/S1744309110014491     Document Type: Article

References (20)

1. Aliverti, A., Pandini, V., Pennati, A., de Rosa, M. & Zanetti, G. (2008). Arch. Biochem. Biophys. 474, 283-291.
2. Ashikawa, Y., Fujimoto, Z., Noguchi, H., Habe, H., Omori, T., Yamane, H. & Nojiri, H. (2006). Structure, 14, 1779-1789.
3. Ashikawa, Y., Uchimura, H., Fujimoto, Z., Inoue, K., Noguchi, H., Yamane, H. & Nojiri, H. (2007). Acta Cryst. F 63, 499-502.
4. Batie, C. J., Ballou, D. P. & Correll, C. C. (1991). Chemistry and Biochemistry of Flavoenzymes, edited by F. Muller, Vol. 3, pp. 543-556. Boca Raton: CRC Press.
5. Bradford, M. M. (1976). Anal. Chem. 72, 248-254.
6. Collaborative Computational Project, Number 4 (1994). Acta Cryst. D 50, 760-763.
7. Correll, C. C., Batie, C. J., Ballou, D. P. & Ludwig, M. L. (1992). Science, 258, 1604-1610.
8. Friemann, R., Lee, K., Brown, E. N., Gibson, D. T., Eklund, H. & Ramaswamy, S. (2009). Acta Cryst. D 65, 24-33.
9. Inoue, K., Ashikawa, Y., Umeda, T., Abo, M., Katsuki, J., Usami, Y., Noguchi, H., Fujimoto, Z., Terada, T., Yamane, H. & Nojiri, H. (2009). J. Mol. Biol. 392, 436-451.
10. Karlsson, A., Beharry, Z. M., Eby, D. M., Coulter, E. D., Neidle, E. L., Kurtz, D. M. Jr, Eklund, H. & Ramaswamy, S. (2002). J. Mol. Biol. 318, 261-272.
11. Matthews, B. W. (1968). J. Mol. Biol. 33, 491-497.
12. Nam, J.-W., Noguchi, H., Fujimoto, Z., Mizuno, H., Ashikawa, Y., Abo, M., Fushinobu, S., Kobashi, N., Wakagi, T., Iwata, K., Yoshida, T., Habe, H., Yamane, H., Omori, T. & Nojiri, H. (2005). Proteins, 58, 779-789.
13. Nojiri, H., Ashikawa, Y., Noguchi, H., Nam, J.-W., Urata, M., Fujimoto, Z., Uchimura, H., Terada, T., Nakamura, S., Shimizu, K., Yoshida, T., Habe, H. & Omori, T. (2005). J. Mol. Biol. 351, 355-370.
14. Otwinowski, Z. & Minor, W. (1997). Methods Enzymol. 276, 307-326.
15. Sambrook, J. & Russell, D. W. (2001). Molecular Cloning: A Laboratory Manual, 3rd ed. New York: Cold Spring Harbor Laboratory Press.
16. Senda, T., Yamada, T., Sakurai, N., Kubota, M., Nishizaki, T., Masai, E., Fukuda, M. & Mitsui, Y. (2000). J. Mol. Biol. 304, 397-410.
17. Sevrioukova, I. F., Li, H. & Poulos, T. L. (2004). J. Mol. Biol. 336, 889-902.
18. Shintani, M., Urata, M., Inoue, K., Eto, K., Habe, H., Omori, T., Yamane, H. & Nojiri, H. (2007). J. Bacteriol. 189, 2007-2020.
19. Subramanian, V., Liu, T.-N., Yeh, W.-K., Narro, M. & Gibson, D. T. (1981). J. Biol. Chem. 256, 2723-2730.
20. Umeda, T., Katsuki, J., Usami, Y., Inoue, K., Noguchi, H., Fujimoto, Z., Ashikawa, Y., Yamane, H. & Nojiri, H. (2008). Acta Cryst. F 64, 632-635.