메뉴 건너뛰기




Volumn 38, Issue 2, 2010, Pages 617-621

Through a generation darkly: Small RNAs in the gametophyte

Author keywords

Gametophyte; MicroRNA (miRNA); Short interfering RNA (siRNA); Small RNA; Trans acting short interfering RNA (ta siRNA)

Indexed keywords

ARF PROTEIN; ARGONAUTE 1 PROTEIN; ARGONAUTE 10 PROTEIN; DOUBLE STRANDED RNA; MESSENGER RNA; MICRORNA; NUCLEIC ACID BINDING PROTEIN; RNA; SMALL INTERFERING RNA; SMALL RNA; TRANS ACTING SHORT INTERFERING RNA; TRANSCRIPTOME; UNCLASSIFIED DRUG; UNTRANSLATED RNA;

EID: 77953071679     PISSN: 03005127     EISSN: 14708752     Source Type: Journal    
DOI: 10.1042/BST0380617     Document Type: Review
Times cited : (8)

References (46)
  • 1
    • 33750011541 scopus 로고    scopus 로고
    • RNA world: The dark matter of evolutionary genomics
    • Michalak, P. (2006) RNA world: the dark matter of evolutionary genomics. J. Evol. Biol. 19, 1768-1774
    • (2006) J. Evol. Biol. , vol.19 , pp. 1768-1774
    • Michalak, P.1
  • 2
    • 1942535718 scopus 로고    scopus 로고
    • Small RNAs in genome rearrangement in Tetrahymena
    • Mochizuki, K. and Gorovsky, M.A. (2004) Small RNAs in genome rearrangement in Tetrahymena. Curr. Opin. Genet. Dev. 14, 181-187
    • (2004) Curr. Opin. Genet. Dev. , vol.14 , pp. 181-187
    • Mochizuki, K.1    Gorovsky, M.A.2
  • 3
    • 38849167412 scopus 로고    scopus 로고
    • Biogenesis and germline functions of piRNAs
    • Klattenhoff, C. and Theurkauf, W. (2008) Biogenesis and germline functions of piRNAs. Development 135, 3-9
    • (2008) Development , vol.135 , pp. 3-9
    • Klattenhoff, C.1    Theurkauf, W.2
  • 4
    • 33645528966 scopus 로고    scopus 로고
    • Post-transcriptional small RNA pathways in plants: Mechanisms and regulations
    • Vaucheret, H. (2006) Post-transcriptional small RNA pathways in plants: mechanisms and regulations. Genes Dev. 20, 759-771
    • (2006) Genes Dev. , vol.20 , pp. 759-771
    • Vaucheret, H.1
  • 5
    • 60149086351 scopus 로고    scopus 로고
    • Origin, biogenesis, and activity of plant microRNAs
    • Voinnet, O. (2009) Origin, biogenesis, and activity of plant microRNAs. Cell 136, 669-687
    • (2009) Cell , vol.136 , pp. 669-687
    • Voinnet, O.1
  • 6
    • 23844550243 scopus 로고    scopus 로고
    • Arabidopsis ARGONAUTE1 is an RNA Slicer that selectively recruits microRNAs and short interfering RNAs
    • Baumberger, N. and Baulcombe, D.C. (2005) Arabidopsis ARGONAUTE1 is an RNA Slicer that selectively recruits microRNAs and short interfering RNAs. Proc. Natl. Acad. Sci. U.S.A. 102, 11928-11933
    • (2005) Proc. Natl. Acad. Sci. U.S.A. , vol.102 , pp. 11928-11933
    • Baumberger, N.1    Baulcombe, D.C.2
  • 7
    • 51649111864 scopus 로고    scopus 로고
    • MicroRNA maturation and action: The expanding roles of ARGONAUTEs
    • Mallory, A.C., Elmayan, T. and Vaucheret, H. (2008) MicroRNA maturation and action: the expanding roles of ARGONAUTEs. Curr. Opin. Plant Biol. 11, 560-566
    • (2008) Curr. Opin. Plant Biol. , vol.11 , pp. 560-566
    • Mallory, A.C.1    Elmayan, T.2    Vaucheret, H.3
  • 10
    • 17444430392 scopus 로고    scopus 로고
    • MicroRNA-directed phasing during trans-acting siRNA biogenesis in plants
    • Allen, E., Xie, Z., Gustafson, A.M. and Carrington, J.C. (2005) microRNA-directed phasing during trans-acting siRNA biogenesis in plants. Cell 121, 207-221
    • (2005) Cell , vol.121 , pp. 207-221
    • Allen, E.1    Xie, Z.2    Gustafson, A.M.3    Carrington, J.C.4
  • 11
    • 33750440526 scopus 로고    scopus 로고
    • A Two-Hit Trigger for siRNA Biogenesis in Plants
    • DOI 10.1016/j.cell.2006.09.032, PII S009286740601292X
    • Axtell, M.J., Jan, C., Rajagopalan, R. and Bartel, D.P. (2006) A two-hit trigger for siRNA biogenesis in plants. Cell 127, 565-577 (Pubitemid 44647429)
    • (2006) Cell , vol.127 , Issue.3 , pp. 565-577
    • Axtell, M.J.1    Jan, C.2    Rajagopalan, R.3    Bartel, D.P.4
  • 13
    • 34250683941 scopus 로고    scopus 로고
    • Improperly terminated, unpolyadenylated mRNA of sense transgenes is targeted by RDR6-mediated RNA silencing in Arabidopsis
    • DOI 10.1105/tpc.106.045724
    • Luo, Z. and Chen, Z. (2007) Improperly terminated, unpolyadenylated mRNA of sense transgenes is targeted by RDR6-mediated RNA silencing in Arabidopsis. Plant Cell 19, 943-958 (Pubitemid 46953239)
    • (2007) Plant Cell , vol.19 , Issue.3 , pp. 943-958
    • Luo, Z.1    Chen, Z.2
  • 15
    • 58149347080 scopus 로고    scopus 로고
    • A stepwise pathway for biogenesis of 24-nt secondary siRNAs and spreading of DNA methylation
    • Daxinger, L., Kanno, T., Bucher, E., van der Winden, J., Naumann, U., Matzke, A.J. and Matzke, M. (2009) A stepwise pathway for biogenesis of 24-nt secondary siRNAs and spreading of DNA methylation. EMBO J. 28, 48-57
    • (2009) EMBO J. , vol.28 , pp. 48-57
    • Daxinger, L.1    Kanno, T.2    Bucher, E.3    Van Der Winden, J.4    Naumann, U.5    Matzke, A.J.6    Matzke, M.7
  • 17
    • 33745690105 scopus 로고    scopus 로고
    • The Arabidopsis chromatin-modifying nuclear siRNA pathway involves a nucleolar RNA processing center
    • Pontes, O., Li, C.F., Nunes, P.C., Haag, J., Ream, T., Vitins, A., Jacobsen, S.E. and Pikaard, C.S. (2006) The Arabidopsis chromatin-modifying nuclear siRNA pathway involves a nucleolar RNA processing center. Cell 126, 79-92
    • (2006) Cell , vol.126 , pp. 79-92
    • Pontes, O.1    Li, C.F.2    Nunes, P.C.3    Haag, J.4    Ream, T.5    Vitins, A.6    Jacobsen, S.E.7    Pikaard, C.S.8
  • 19
    • 70350341230 scopus 로고    scopus 로고
    • Bridging the generation gap: Flowering plant gametophytes and animal germlines reveal unexpected similarities
    • Dickinson, H.G. and Grant-Downton, R. (2009) Bridging the generation gap: flowering plant gametophytes and animal germlines reveal unexpected similarities. Biol. Rev. Camb. Philos. Soc. 84, 589-615
    • (2009) Biol. Rev. Camb. Philos. Soc. , vol.84 , pp. 589-615
    • Dickinson, H.G.1    Grant-Downton, R.2
  • 20
    • 26944493068 scopus 로고    scopus 로고
    • Gene family analysis of the Arabidopsis pollen transcriptome reveals biological implications for cell growth, division control, and gene expression regulation
    • Pina, C., Pinto, F., Feijó, J.A. and Becker, J.D. (2005) Gene family analysis of the Arabidopsis pollen transcriptome reveals biological implications for cell growth, division control, and gene expression regulation. Plant Physiol. 138, 744-756
    • (2005) Plant Physiol. , vol.138 , pp. 744-756
    • Pina, C.1    Pinto, F.2    Feijó, J.A.3    Becker, J.D.4
  • 21
    • 68349145129 scopus 로고    scopus 로고
    • Small RNA pathways are present and functional in the angiosperm male gametophyte
    • Grant-Downton, R.T., Hafidh, S., Twell., D. and Dickinson, H.G. (2009) Small RNA pathways are present and functional in the angiosperm male gametophyte. Mol. Plant 2, 500-512
    • (2009) Mol. Plant , vol.2 , pp. 500-512
    • Grant-Downton, R.T.1    Hafidh, S.2    Twell, D.3    Dickinson, H.G.4
  • 23
    • 35348889711 scopus 로고    scopus 로고
    • A germ cell specific gene of the ARGONAUTE family is essential for the progression of premeiotic mitosis and meiosis during sporogenesis in rice
    • Nonomura, K., Morohoshi, A., Nakano, M., Eiguchi, M., Miyao, A., Hirochika, H. and and Kurata, N. (2007) A germ cell specific gene of the ARGONAUTE family is essential for the progression of premeiotic mitosis and meiosis during sporogenesis in rice. Plant Cell 19, 2583-2594
    • (2007) Plant Cell , vol.19 , pp. 2583-2594
    • Nonomura, K.1    Morohoshi, A.2    Nakano, M.3    Eiguchi, M.4    Miyao, A.5    Hirochika, H.6    Kurata, N.7
  • 24
    • 39749117921 scopus 로고    scopus 로고
    • Genetic subtraction profiling identifies genes essential for Arabidopsis reproduction and reveals interaction between the female gametophyte and the maternal sporophyte
    • Johnston, A.J., Meier, P., Gheyselinck, J., Wuest, S.E., Federer, M., Schlagenhauf, E., Becker, J.D. and Grossniklaus, U. (2007) Genetic subtraction profiling identifies genes essential for Arabidopsis reproduction and reveals interaction between the female gametophyte and the maternal sporophyte. Genome Biol. 8, R204
    • (2007) Genome Biol. , vol.8
    • Johnston, A.J.1    Meier, P.2    Gheyselinck, J.3    Wuest, S.E.4    Federer, M.5    Schlagenhauf, E.6    Becker, J.D.7    Grossniklaus, U.8
  • 25
    • 0037783231 scopus 로고    scopus 로고
    • The identification of candidate genes for a reverse genetic analysis of development and function in the Arabidopsis gynoecium
    • DOI 10.1104/pp.102.017798
    • Scutt, C.P., Vinaguer-Douard, M., Fourquin, C., Ailhas, J., Kuno, N., Uchida, K., Gaude, T., Furuya, M. and Dumas, C. (2003) The identification of candidate genes for a reverse genetic analysis of development and function in the Arabidopsis gynoecium. Plant Physiol. 132, 653-665 (Pubitemid 36715065)
    • (2003) Plant Physiology , vol.132 , Issue.2 , pp. 653-665
    • Scutt, C.P.1    Vinauger-Douard, M.2    Fourquin, C.3    Ailhas, J.4    Kuno, N.5    Uchida, K.6    Gaude, T.7    Furuya, M.8    Dumas, C.9
  • 26
    • 33748921746 scopus 로고    scopus 로고
    • EST generation and analyses towards identifying female gametophyte-specific genes in Zea mays L
    • DOI 10.1007/s00425-006-0283-3
    • Yang, H., Kaur, N., Kiriakopolos, S. and McCormick, S. (2006) EST generation and analyses towards identifying female gametophyte-specific genes in Zea mays L. Planta 224, 1004-1014 (Pubitemid 44435851)
    • (2006) Planta , vol.224 , Issue.5 , pp. 1004-1014
    • Yang, H.1    Kaur, N.2    Kiriakopolos, S.3    McCormick, S.4
  • 27
    • 67649920761 scopus 로고    scopus 로고
    • Auxin-dependent patterning and gamete specification in the Arabidopsis female gametophyte
    • Pagnussat, G.C., Alandete-Saez, M., Bowman, J.L. and Sundaresan, V. (2009) Auxin-dependent patterning and gamete specification in the Arabidopsis female gametophyte. Science 324, 1684-1689
    • (2009) Science , vol.324 , pp. 1684-1689
    • Pagnussat, G.C.1    Alandete-Saez, M.2    Bowman, J.L.3    Sundaresan, V.4
  • 28
    • 33745107518 scopus 로고    scopus 로고
    • Spatio-temporal accumulation of microRNAs is highly coordinated in developing plant tissues
    • DOI 10.1111/j.1365-313X.2006.02766.x
    • Válóczi, A., Várallyay, E., Kauppinen, S., Burgyán, J. and Havelda, Z. (2006) Spatio-temporal accumulation of microRNAs is highly coordinated in developing plant tissues. Plant J. 47, 140-151 (Pubitemid 43883020)
    • (2006) Plant Journal , vol.47 , Issue.1 , pp. 140-151
    • Valoczi, A.1    Varallyay, E.2    Kauppinen, S.3    Burgyan, J.4    Havelda, Z.5
  • 29
    • 34247369438 scopus 로고    scopus 로고
    • Redundancy and specialization among plant microRNAs: Role of the MIR164 family in developmental robustness
    • DOI 10.1242/dev.02817
    • Sieber, P., Wellmer, F., Gheyselinck, J., Riechmann, J.L. and Meyerowitz, E.M. (2007) Redundancy and specialization among plant microRNAs: role of the MIR164 family in developmental robustness. Development 134, 1051-1060 (Pubitemid 46630073)
    • (2007) Development , vol.134 , Issue.6 , pp. 1051-1060
    • Sieber, P.1    Wellmer, F.2    Gheyselinck, J.3    Riechmann, J.L.4    Meyerowitz, E.M.5
  • 30
    • 47249141071 scopus 로고    scopus 로고
    • Comparative analysis of the MIR319a microRNA locus in Arabidopsis and related Brassicaceae
    • Warthmann, N., Das, S., Lanz, C. and Weigel, D. (2008) Comparative analysis of the MIR319a microRNA locus in Arabidopsis and related Brassicaceae. Mol. Biol. Evol. 25, 892-902
    • (2008) Mol. Biol. Evol. , vol.25 , pp. 892-902
    • Warthmann, N.1    Das, S.2    Lanz, C.3    Weigel, D.4
  • 31
    • 68149101201 scopus 로고    scopus 로고
    • Profiling microRNA expression in Arabidopsis pollen using microRNA array and real-time PCR
    • Chambers, C. and Shuai, B. (2009) Profiling microRNA expression in Arabidopsis pollen using microRNA array and real-time PCR. BMC Plant Biol. 9, 87
    • (2009) BMC Plant Biol. , vol.9 , pp. 87
    • Chambers, C.1    Shuai, B.2
  • 33
    • 67650287292 scopus 로고    scopus 로고
    • A collection of Ds insertional mutants associated with defects in male gametophyte development and function in Arabidopsis thaliana
    • Boavida, L.C., Shuai, B., Yu, H.J., Pagnussat, G.C., Sundaresan, V. and McCormick, S. (2009) A collection of Ds insertional mutants associated with defects in male gametophyte development and function in Arabidopsis thaliana. Genetics 181, 1369-1385
    • (2009) Genetics , vol.181 , pp. 1369-1385
    • Boavida, L.C.1    Shuai, B.2    Yu, H.J.3    Pagnussat, G.C.4    Sundaresan, V.5    McCormick, S.6
  • 35
    • 0038806480 scopus 로고    scopus 로고
    • Sperm cells of Zea mays have a complex complement of mRNAs
    • Engel, M.L., Chaboud, A., Dumas, C. and McCormick, S. (2003) Sperm cells of Zea mays have a complex complement of mRNAs. Plant J. 34, 697-707
    • (2003) Plant J. , vol.34 , pp. 697-707
    • Engel, M.L.1    Chaboud, A.2    Dumas, C.3    McCormick, S.4
  • 36
    • 18844424626 scopus 로고    scopus 로고
    • The role of ARGONAUTE1 (AGO1) in meristem formation and identity
    • Kidner, C.A. and Martienssen, R.A. (2005) The role of ARGONAUTE1 (AGO1) in meristem formation and identity. Dev. Biol. 280, 504-517
    • (2005) Dev. Biol. , vol.280 , pp. 504-517
    • Kidner, C.A.1    Martienssen, R.A.2
  • 37
    • 33645967150 scopus 로고    scopus 로고
    • AGO1 homeostasis entails coexpression of MIR168 and AGO1 and preferential stabilization of miR168 by AGO1
    • Vaucheret H., Mallory A.C. and Bartels, D.P. (2006) AGO1 homeostasis entails coexpression of MIR168 and AGO1 and preferential stabilization of miR168 by AGO1. Mol. Cell 22, 129-136
    • (2006) Mol. Cell , vol.22 , pp. 129-136
    • Vaucheret, H.1    Mallory, A.C.2    Bartels, D.P.3
  • 38
    • 67349155588 scopus 로고    scopus 로고
    • ARGONAUTE 1 homeostasis invokes the coordinate action of the microRNA and siRNA pathways
    • Mallory A.C., Vaucheret H. (2009) ARGONAUTE 1 homeostasis invokes the coordinate action of the microRNA and siRNA pathways. EMBO Rep. 10, 521-526
    • (2009) EMBO Rep. , vol.10 , pp. 521-526
    • Mallory, A.C.1    Vaucheret, H.2
  • 39
    • 29144499987 scopus 로고    scopus 로고
    • Epigenetics and its implications for plant biology. 2. The 'epigenetic epiphany': Epigenetics, evolution and beyond
    • Grant-Downton R.T., Dickinson H.G. (2006) Epigenetics and its implications for plant biology. 2. The 'epigenetic epiphany': epigenetics, evolution and beyond. Ann. Bot. 97, 11-27
    • (2006) Ann. Bot. , vol.97 , pp. 11-27
    • Grant-Downton, R.T.1    Dickinson, H.G.2
  • 40
    • 0002289439 scopus 로고
    • The rise of the angiosperms: A genecological factor
    • Mulcahy, D.L. (1979) The rise of the angiosperms: a genecological factor. Science 206, 20-23
    • (1979) Science , vol.206 , pp. 20-23
    • Mulcahy, D.L.1
  • 41
    • 35148870536 scopus 로고    scopus 로고
    • Widespread role for the flowering-time regulators FCA and FPA in RNA-mediated chromatin silencing
    • DOI 10.1126/science.1146565
    • Bäurle, I., Smith, L., Baulcombe, D.C. and Dean, C. (2007) Widespread role for the flowering-time regulators FCA and FPA in RNA-mediated chromatin silencing. Science 318, 109-112 (Pubitemid 47538044)
    • (2007) Science , vol.318 , Issue.5847 , pp. 109-112
    • Baurle, I.1    Smith, L.2    Baulcombe, D.C.3    Dean, C.4
  • 42
    • 0030851819 scopus 로고    scopus 로고
    • Developmental changes in DNA methylation of the two tobacco pollen nuclei during maturation
    • Oakeley, E.J., Podestà, A. and Jost, J.-P. (1997) Developmental changes in DNA methylation of the two tobacco pollen nuclei during maturation. Proc. Natl. Acad. Sci. U.S.A. 94, 11721-11725
    • (1997) Proc. Natl. Acad. Sci. U.S.A. , vol.94 , pp. 11721-11725
    • Oakeley, E.J.1    Podestà, A.2    Jost, J.-P.3
  • 43
    • 0034072266 scopus 로고    scopus 로고
    • Histone H4 acetylation and DNA methylation dynamics during pollen development
    • Janousek, B., Zluvova, J. and Vyscot, B. (2000) Histone H4 acetylation and DNA methylation dynamics during pollen development. Protoplasma 211, 116-122 (Pubitemid 30187850)
    • (2000) Protoplasma , vol.211 , Issue.1-2 , pp. 116-122
    • Janousek, B.1    Zluvova, J.2    Vyskot, B.3
  • 45
    • 33745319337 scopus 로고    scopus 로고
    • RNA-mediated non-mendelian inheritance of an epigenetic change in the mouse
    • DOI 10.1038/nature04674, PII NATURE04674
    • Rassoulzadegan, M., Grandjean, V., Gounon, P., Vincent, S., Gillot, I. and Cuzin, F. (2006) RNA-mediated non-Mendelian inheritance of an epigenetic change in the mouse. Nature 441, 469-474 (Pubitemid 44050143)
    • (2006) Nature , vol.441 , Issue.7092 , pp. 469-474
    • Rassoulzadegan, M.1    Grandjean, V.2    Gounon, P.3    Vincent, S.4    Gillot, I.5    Cuzin, F.6
  • 46
    • 44449141843 scopus 로고    scopus 로고
    • RNA Induction and Inheritance of Epigenetic Cardiac Hypertrophy in the Mouse
    • DOI 10.1016/j.devcel.2008.03.009, PII S1534580708001196
    • Wagner, K.D., Wagner, N., Ghanbarian, H., Grandjean, V., Gounon, P., Cuzin, F. and Rassoulzadegan, M. (2008) RNA induction and inheritance of epigenetic cardiac hypertrophy in the mouse. Dev. Cell 14, 962-969 (Pubitemid 351757196)
    • (2008) Developmental Cell , vol.14 , Issue.6 , pp. 962-969
    • Wagner, K.D.1    Wagner, N.2    Ghanbarian, H.3    Grandjean, V.4    Gounon, P.5    Cuzin, F.6    Rassoulzadegan, M.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.