-
1
-
-
0034023665
-
Mucin secretion is modulated by luminal factors in the isolated vascularly perfused rat colon
-
DOI 10.1136/gut.46.2.218
-
Barcelo, A., Claustre, J., Moro, F., Chayvialle, J. A., Cuber, J. C. & Plaisancié, P. (2000). Mucin secretion is modulated by luminal factors in the isolated vascularly perfused rat colon. Gut 46, 218-224. (Pubitemid 30305848)
-
(2000)
Gut
, vol.46
, Issue.2
, pp. 218-224
-
-
Barcelo, A.1
Claustre, J.2
Moro, F.3
Chayvialle, J.-A.4
Cuber, J.-C.5
Plaisancie, P.6
-
2
-
-
0034111016
-
Phylogenetic relationships of butyrate-producing bacteria from the human gut
-
DOI 10.1128/AEM.66.4.1654-1661.2000
-
Barcenilla, A., Pryde, S. E., Martin, J. C., Duncan, S. H., Stewart, C. S., Henderson, C. & Flint, H. J. (2000). Phylogenetic relationships of butyrate-producing bacteria from the human gut. Appl Environ Microbiol 66, 1654-1661. (Pubitemid 30185646)
-
(2000)
Applied and Environmental Microbiology
, vol.66
, Issue.4
, pp. 1654-1661
-
-
Barcenilla, A.1
Pryde, S.E.2
Martin, J.C.3
Duncan, S.H.4
Stewart, C.S.5
Henderson, C.6
Flint, H.J.7
-
3
-
-
84907126968
-
A simplified bacterial spore stain
-
Bartholomew, J. W. & Mittwer, T. (1950). A simplified bacterial spore stain. Stain Technol 25, 153-156.
-
(1950)
Stain Technol
, vol.25
, pp. 153-156
-
-
Bartholomew, J.W.1
Mittwer, T.2
-
4
-
-
12744253569
-
Histone deacetylase inhibitors up-regulate the expression of tight junction proteins
-
Bordin, M., D'Atri, F., Guillemot, L. & Citi, S. (2004). Histone deacetylase inhibitors up-regulate the expression of tight junction proteins. Mol Cancer Res 2, 692-701.
-
(2004)
Mol Cancer Res
, vol.2
, pp. 692-701
-
-
Bordin, M.1
D'Atri, F.2
Guillemot, L.3
Citi, S.4
-
5
-
-
0032902329
-
Classification of Alcaligenes faecalis-like isolates from the environment and human clinical samples as Ralstonia gilardii sp. nov
-
Coenye, T., Falsen, E., Vancanneyt, M., Hoste, B., Govan, J. R. W., Kersters, K. & Vandamme, P. (1999). Classification of Alcaligenes faecalis-like isolates from the environment and human clinical samples as Ralstonia gilardii sp. nov. Int J Syst Bacteriol 49, 405-413. (Pubitemid 129755046)
-
(1999)
International Journal of Systematic Bacteriology
, vol.49
, Issue.2
, pp. 405-413
-
-
Coenye, T.1
-
6
-
-
0036708323
-
Comparative assessment of genotyping methods for epidemiologic study of Burkholderia cepacia genomovar III
-
DOI 10.1128/JCM.40.9.3300-3307.2002
-
Coenye, T., Spiker, T., Martin, A. & LiPuma, J. J. (2002). Comparative assessment of genotyping methods for epidemiologic study of Burkholderia cepacia genomovar III. J Clin Microbiol 40, 3300-3307. (Pubitemid 34977445)
-
(2002)
Journal of Clinical Microbiology
, vol.40
, Issue.9
, pp. 3300-3307
-
-
Coenye, T.1
Spilker, T.2
Martin, A.3
Lipuma, J.J.4
-
7
-
-
0028126829
-
The phylogeny of the genus Clostridium: Proposal of five new genera and eleven new species combinations
-
Collins, M. D., Lawson, P. A., Willems, A., Cordoba, J. J., Fernandez-Garayzabal, J., Garcia, P., Cai, J., Hippe, H. & Farrow, J. A. E. (1994). The phylogeny of the genus Clostridium: proposal of five new genera and eleven new species combinations. Int J Syst Bacteriol 44, 812-826. (Pubitemid 24315163)
-
(1994)
International Journal of Systematic Bacteriology
, vol.44
, Issue.4
, pp. 812-826
-
-
Collins, M.D.1
Lawson, P.A.2
Willems, A.3
Cordoba, J.J.4
Fernandez-Garayzabal, J.5
Garcia, P.6
Cai, J.7
Hippe, H.8
Farrow, J.A.E.9
-
8
-
-
58949088055
-
Butyricicoccus pullicaecorum gen. nov., sp. nov., an anaerobic, butyrate-producing bacterium isolated from the caecal content of a broiler chicken
-
Eeckhaut, V., Van Immerseel, F., Teirlynck, E., Pasmans, F., Fievez, V., Snauwaert, C., Haesebrouck, F., Ducatelle, R., Louis, P. & Vandamme, P. (2008). Butyricicoccus pullicaecorum gen. nov., sp. nov., an anaerobic, butyrate-producing bacterium isolated from the caecal content of a broiler chicken. Int J Syst Evol Microbiol 58, 2799-2802.
-
(2008)
Int J Syst Evol Microbiol
, vol.58
, pp. 2799-2802
-
-
Eeckhaut, V.1
Van Immerseel, F.2
Teirlynck, E.3
Pasmans, F.4
Fievez, V.5
Snauwaert, C.6
Haesebrouck, F.7
Ducatelle, R.8
Louis, P.9
Vandamme, P.10
-
9
-
-
0000122573
-
PHYLIP - Phylogeny inference package (version 3.2)
-
Felsenstein, J. (1989). PHYLIP - phylogeny inference package (version 3.2). Cladistics 5, 164-166.
-
(1989)
Cladistics
, vol.5
, pp. 164-166
-
-
Felsenstein, J.1
-
10
-
-
33846462033
-
Dietary fructooligosaccharides alter the cultivable faecal population of rats but do not stimulate the growth of intestinal bifidobacteria
-
DOI 10.1139/W06-053
-
Gourgue-Jeannot, C., Kalmokoff, M. L., Kheradpir, E., Kwan, J., Lampi, B. J., McAllister, M. & Brooks, S. P. J. (2006). Dietary fructooligosaccharides alter the cultivable faecal population of rats but do not stimulate the growth of intestinal bifidobacteria. Can J Microbiol 52, 924-933. (Pubitemid 46144321)
-
(2006)
Canadian Journal of Microbiology
, vol.52
, Issue.10
, pp. 924-933
-
-
Gourgue-Jeannot, C.1
Kalmokoff, M.L.2
Kheradpir, E.3
Kwan, J.4
Lampi, B.J.5
McAllister, M.6
Brooks, S.P.J.7
-
11
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
-
(1980)
J Mol Evol
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
12
-
-
33845901507
-
Microbial ecology: Human gut microbes associated with obesity
-
DOI 10.1038/4441022a, PII 4441022A
-
Ley, R. E., Turnbaugh, P. J., Klein, S. & Gordon, J. I. (2006). Microbial ecology: human gut microbes associated with obesity. Nature 444, 1022-1023. (Pubitemid 46018512)
-
(2006)
Nature
, vol.444
, Issue.7122
, pp. 1022-1023
-
-
Ley, R.E.1
Turnbaugh, P.J.2
Klein, S.3
Gordon, J.I.4
-
13
-
-
1642277665
-
Restricted Distribution of the Butyrate Kinase Pathway among Butyrate-Producing Bacteria from the Human Colon
-
DOI 10.1128/JB.186.7.2099-2106.2004
-
Louis, P., Duncan, S. H., McCrae, S. I., Millar, J., Jackson, M. S. & Flint, H. J. (2004). Restricted distribution of the butyrate kinase pathway among butyrate-producing bacteria from the human colon. J Bacteriol 186, 2099-2106. (Pubitemid 38381199)
-
(2004)
Journal of Bacteriology
, vol.186
, Issue.7
, pp. 2099-2106
-
-
Louis, P.1
Duncan, S.H.2
McCrae, S.I.3
Millar, J.4
Jackson, M.S.5
Flint, H.J.6
-
14
-
-
0030926950
-
Effect of short-chain fatty acids on paracellular permeability in Caco- 2 intestinal epithelium model
-
Mariadason, J. M., Barkla, D. H. & Gibson, P. R. (1997). Effect of short-chain fatty acids on paracellular permeability in Caco-2 intestinal epithelium model. Am J Physiol 272, G705-G712. (Pubitemid 27216516)
-
(1997)
American Journal of Physiology - Gastrointestinal and Liver Physiology
, vol.272
, Issue.4
-
-
Mariadason, J.M.1
Barkla, D.H.2
Gibson, P.R.3
-
16
-
-
33846974390
-
Effects of butyrate on intestinal barrier function in a Caco-2 cell monolayer model of intestinal barrier
-
Peng, L., He, Z., Chen, W., Holzman, I. R. & Lin, J. (2007). Effects of butyrate on intestinal barrier function in a Caco-2 cell monolayer model of intestinal barrier. Pediatr Res 61, 37-41.
-
(2007)
Pediatr Res
, vol.61
, pp. 37-41
-
-
Peng, L.1
He, Z.2
Chen, W.3
Holzman, I.R.4
Lin, J.5
-
17
-
-
33947505331
-
Isolation and characterisation of new putative probiotic bacteria from human colonic flora
-
Raz, I., Gollop, N., Polak-Charcon, S. & Schwartz, B. (2007). Isolation and characterisation of new putative probiotic bacteria from human colonic flora. Br J Nutr 97, 725-734.
-
(2007)
Br J Nutr
, vol.97
, pp. 725-734
-
-
Raz, I.1
Gollop, N.2
Polak-Charcon, S.3
Schwartz, B.4
-
18
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
19
-
-
0038523850
-
Expression of the cathelicidin LL-37 is modulated by short-chain fatty acids in colonocytes: Relevance of signalling pathways
-
Schauber, J., Svanholm, C., Termén, S., Iffland, K., Menzel, T., Scheppach, W., Melcher, R., Agerbeth, B., Lührs, H. & Gudmundsson, G. H. (2003). Expression of the cathelicidin LL-37 is modulated by short-chain fatty acids in colonocytes: relevance of signalling pathways. Gut 52, 735-741.
-
(2003)
Gut
, vol.52
, pp. 735-741
-
-
Schauber, J.1
Svanholm, C.2
Termén, S.3
Iffland, K.4
Menzel, T.5
Scheppach, W.6
Melcher, R.7
Agerbeth, B.8
Lührs, H.9
Gudmundsson, G.H.10
-
20
-
-
0035989119
-
Anaerostipes caccae gen. nov., sp. nov., a new saccharolytic, acetate-utilising, butyrateproducing bacterium from human faeces
-
Schwiertz, A., Hold, G. L., Duncan, S., Gruhl, B., Collins, M. D., Lawson, P. A., Flint, H. J. & Blaut, M. (2002). Anaerostipes caccae gen. nov., sp. nov., a new saccharolytic, acetate-utilising, butyrateproducing bacterium from human faeces. Syst Appl Microbiol 25, 46-51.
-
(2002)
Syst Appl Microbiol
, vol.25
, pp. 46-51
-
-
Schwiertz, A.1
Hold, G.L.2
Duncan, S.3
Gruhl, B.4
Collins, M.D.5
Lawson, P.A.6
Flint, H.J.7
Blaut, M.8
-
21
-
-
32044466263
-
Molecular techniques for analyzing chicken microbiota
-
Selim, A. S. M. (2006). Molecular techniques for analyzing chicken microbiota. Biotechnology 5, 53-57.
-
(2006)
Biotechnology
, vol.5
, pp. 53-57
-
-
Selim, A.S.M.1
-
22
-
-
55949124035
-
Faecalibacterium prausnitzii is an anti-inflammatory commensal bacterium identified by gut microbiota analysis of Crohn disease patients
-
Sokol, H., Pigneur, B., Watterlot, L., Lakhdari, O., Bermúdez- Humarán, L. G., Gratadoux, J. J., Blugeon, S., Bridonneau, C., Furet, J. P. & other authors (2008). Faecalibacterium prausnitzii is an anti-inflammatory commensal bacterium identified by gut microbiota analysis of Crohn disease patients. Proc Natl Acad Sci U S A 105, 16731-16736.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 16731-16736
-
-
Sokol, H.1
Pigneur, B.2
Watterlot, L.3
Lakhdari, O.4
Bermúdez- Humarán, L.G.5
Gratadoux, J.J.6
Blugeon, S.7
Bridonneau, C.8
Furet, J.P.9
-
23
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
24
-
-
0034959553
-
Short-chain fatty acids and human colonic function: Roles of resistant starch and non-starch polysaccharides
-
Topping, D. L. & Clifton, P. M. (2001). Short-chain fatty acids and human colonic function: roles of resistant starch and non-starch polysaccharides. Physiol Rev 81, 1031-1064.
-
(2001)
Physiol Rev
, vol.81
, pp. 1031-1064
-
-
Topping, D.L.1
Clifton, P.M.2
-
25
-
-
0034041258
-
Role of volatile fatty acids in development of the cecal microflora in broiler chickens during growth
-
van der Wielen, P. W. J. J., Biesterveld, S., Notemans, S., Hofstra, H., Urlings, B. A. P. & Knapen, F. (2000). Role of volatile fatty acids in development of the cecal microflora in broiler chickens during growth. Appl Environ Microbiol 66, 2536-2540.
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 2536-2540
-
-
Van Der Wielen, P.W.J.J.1
Biesterveld, S.2
Notemans, S.3
Hofstra, H.4
Urlings, B.A.P.5
Knapen, F.6
-
26
-
-
0017642794
-
Effect of monensin on rumen metabolism in vitro
-
Van Nevel, C. J. & Demeyer, D. I. (1977). Effect of monensin on rumen metabolism in vitro. Appl Environ Microbiol 34, 251-257.
-
(1977)
Appl Environ Microbiol
, vol.34
, pp. 251-257
-
-
Van Nevel, C.J.1
Demeyer, D.I.2
-
27
-
-
0014751527
-
A simple method for the simultaneous determination of gas production and volatile fatty acid concentration in the rumen
-
Van Nevel, C. J., Demeyer, D. I., Henderickx, H. K. & Martin, J. A. (1970). A simple method for the simultaneous determination of gas production and volatile fatty acid concentration in the rumen. Z Tierphysiol Tierernahr Futtermittelkd 26, 100-104.
-
(1970)
Z Tierphysiol Tierernahr Futtermittelkd
, vol.26
, pp. 100-104
-
-
Van Nevel, C.J.1
Demeyer, D.I.2
Henderickx, H.K.3
Martin, J.A.4
-
28
-
-
0027992990
-
Genomic fingerprinting of bacteria using repetitive sequence-based polymerase chain reaction
-
Versalovic, J., Schneider, M., De Bruijn, F. J. & Lupski, J. R. (1994). Genomic fingerprinting of bacteria using repetitive sequence-based polymerase chain reaction. Methods Mol Cell Biol 5, 25-40.
-
(1994)
Methods Mol Cell Biol
, vol.5
, pp. 25-40
-
-
Versalovic, J.1
Schneider, M.2
De Bruijn, F.J.3
Lupski, J.R.4
-
29
-
-
0026067797
-
16S ribosomal DNA amplification for phylogenetic study
-
Weisburg, W. G., Barns, S. M., Pelletier, D. A. & Lane, D. J. (1991). 16S ribosomal DNA amplification for phylogenetic study. J Bacteriol 173, 697-703.
-
(1991)
J Bacteriol
, vol.173
, pp. 697-703
-
-
Weisburg, W.G.1
Barns, S.M.2
Pelletier, D.A.3
Lane, D.J.4
|