-
1
-
-
0032483312
-
Method for prediction of protein function from sequence using the sequence-to-structure-to-function paradigm with application to glutaredoxins/thioredoxins and T1 ribonucleases
-
Fetrow J. S., Skolnick J., Method for prediction of protein function from sequence using the sequence-to-structure-to-function paradigm with application to glutaredoxins/thioredoxins and T1 ribonucleases Journal of Molecular Biology 1998 281 5 949 968
-
(1998)
Journal of Molecular Biology
, vol.281
, Issue.5
, pp. 949-968
-
-
Fetrow, J.S.1
Skolnick, J.2
-
2
-
-
0037305974
-
Overview of structural genomics: From structure to function
-
Zhang C., Kim S.-H., Overview of structural genomics: from structure to function Current Opinion in Chemical Biology 2003 7 1 28 32
-
(2003)
Current Opinion in Chemical Biology
, vol.7
, Issue.1
, pp. 28-32
-
-
Zhang, C.1
Kim, S.-H.2
-
4
-
-
0026730489
-
Structure-based strategies for drug design and discovery
-
Kuntz I. D., Structure-based strategies for drug design and discovery Science 1992 257 5073 1078 1082
-
(1992)
Science
, vol.257
, Issue.5073
, pp. 1078-1082
-
-
Kuntz, I.D.1
-
5
-
-
21544474149
-
Keynote review: Structural biology and drug discovery
-
Congreve M., Murray C., Blundell T., Keynote review: structural biology and drug discovery Drug Discovery Today 2005 10 13 895 907
-
(2005)
Drug Discovery Today
, vol.10
, Issue.13
, pp. 895-907
-
-
Congreve, M.1
Murray, C.2
Blundell, T.3
-
6
-
-
0025787845
-
Contribution of the hydrophobic effect to protein stability: Analysis based on simulations of the ile-96- ala mutation in barnase
-
Prevost M., Wodak S. J., Tidor B., Karplus M., Contribution of the hydrophobic effect to protein stability: analysis based on simulations of the ile-96- ala mutation in barnase Proceedings of the National Academy of Sciences 1991 88 23 10880 10884
-
(1991)
Proceedings of the National Academy of Sciences
, vol.88
, Issue.23
, pp. 10880-10884
-
-
Prevost, M.1
Wodak, S.J.2
Tidor, B.3
Karplus, M.4
-
7
-
-
17044404749
-
Computer prediction of drug resistance mutations in proteins
-
Cao Z. W., Han L. Y., Zheng C. J., Computer prediction of drug resistance mutations in proteins Drug Discovery Today 2005 10 7 521 529
-
(2005)
Drug Discovery Today
, vol.10
, Issue.7
, pp. 521-529
-
-
Cao, Z.W.1
Han, L.Y.2
Zheng, C.J.3
-
8
-
-
70349089774
-
-
Durham, NC, USA Duke University
-
Bespamyatnikh S., Choi V., Edelsbrunner H., Rudolph J., Accurate Protein Docking by Shape Complementarity Alone 2004 Durham, NC, USA Duke University
-
(2004)
Accurate Protein Docking by Shape Complementarity Alone
-
-
Bespamyatnikh, S.1
Choi, V.2
Edelsbrunner, H.3
Rudolph, J.4
-
10
-
-
0029025913
-
A geometry-based suite of molecular docking processes
-
Fischer D., Lin S. L., Wolfson H. L., Nussinov R., A geometry-based suite of molecular docking processes Journal of Molecular Biology 1995 248 2 459 477
-
(1995)
Journal of Molecular Biology
, vol.248
, Issue.2
, pp. 459-477
-
-
Fischer, D.1
Lin, S.L.2
Wolfson, H.L.3
Nussinov, R.4
-
11
-
-
0031565730
-
Modelling protein docking using shape complementarity, electrostatics and biochemical information
-
Gabb H. A., Jackson R. M., Sternberg M. J. E., Modelling protein docking using shape complementarity, electrostatics and biochemical information Journal of Molecular Biology 1997 272 1 106 120
-
(1997)
Journal of Molecular Biology
, vol.272
, Issue.1
, pp. 106-120
-
-
Gabb, H.A.1
Jackson, R.M.2
Sternberg, M.J.E.3
-
13
-
-
15944411795
-
Coarse and reliable geometric alignment for protein docking
-
Wang Y., Agarwal P. K., Brown P., Edelsbrunner H., Rudolph J., Coarse and reliable geometric alignment for protein docking Proceedings of the Pacific Symposium on Biocomputing 2005 65 75
-
(2005)
Proceedings of the Pacific Symposium on Biocomputing
, pp. 65-75
-
-
Wang, Y.1
Agarwal, P.K.2
Brown, P.3
Edelsbrunner, H.4
Rudolph, J.5
-
14
-
-
0036435882
-
Analysis of catalytic residues in enzyme active sites
-
Bartlett G. J., Porter C. T., Borkakoti N., Thornton J. M., Analysis of catalytic residues in enzyme active sites Journal of Molecular Biology 2002 324 1 105 121
-
(2002)
Journal of Molecular Biology
, vol.324
, Issue.1
, pp. 105-121
-
-
Bartlett, G.J.1
Porter, C.T.2
Borkakoti, N.3
Thornton, J.M.4
-
15
-
-
2942517681
-
Enzyme/non-enzyme discrimination and prediction of enzyme active site location using charge-based methods
-
Bate P., Warwicker J., Enzyme/non-enzyme discrimination and prediction of enzyme active site location using charge-based methods Journal of Molecular Biology 2004 340 2 263 276
-
(2004)
Journal of Molecular Biology
, vol.340
, Issue.2
, pp. 263-276
-
-
Bate, P.1
Warwicker, J.2
-
17
-
-
33748779553
-
Insights into protein-protein interfaces using a Bayesian network prediction method
-
Bradford J. R., Needham C. J., Bulpitt A. J., Westhead D. R., Insights into protein-protein interfaces using a Bayesian network prediction method Journal of Molecular Biology 2006 362 2 365 386
-
(2006)
Journal of Molecular Biology
, vol.362
, Issue.2
, pp. 365-386
-
-
Bradford, J.R.1
Needham, C.J.2
Bulpitt, A.J.3
Westhead, D.R.4
-
18
-
-
34248232474
-
HotPatch: A statistical approach to finding biologically relevant features on protein surfaces
-
Pettit F. K., Bare E., Tsai A., Bowie J. U., HotPatch: a statistical approach to finding biologically relevant features on protein surfaces Journal of Molecular Biology 2007 369 3 863 879
-
(2007)
Journal of Molecular Biology
, vol.369
, Issue.3
, pp. 863-879
-
-
Pettit, F.K.1
Bare, E.2
Tsai, A.3
Bowie, J.U.4
-
19
-
-
74249098462
-
Regression applied to protein binding site prediction and comparison with classification
-
Giard J., Ambroise J., Gala J. L., Macq B., Regression applied to protein binding site prediction and comparison with classification BMC Bioinformatics 2009 10 1 276
-
(2009)
BMC Bioinformatics
, vol.10
, Issue.1
, pp. 276
-
-
Giard, J.1
Ambroise, J.2
Gala, J.L.3
MacQ, B.4
-
20
-
-
0020477017
-
Stabilization of protein structure by sugars
-
Arakawa T., Timasheff S. N., Stabilization of protein structure by sugars Biochemistry 1982 21 25 6536 6544
-
(1982)
Biochemistry
, vol.21
, Issue.25
, pp. 6536-6544
-
-
Arakawa, T.1
Timasheff, S.N.2
-
21
-
-
29244451863
-
Progress in scientific visualization
-
Max N., Progress in scientific visualization The Visual Computer 2005 21 12 979 984
-
(2005)
The Visual Computer
, vol.21
, Issue.12
, pp. 979-984
-
-
Max, N.1
-
24
-
-
0037375002
-
Dynamic maintenance and visualization of molecular surfaces
-
Bajaj C. L., Pascucci V., Shamir A., Holt R. J., Netravali A. N., Dynamic maintenance and visualization of molecular surfaces Discrete Applied Mathematics 2003 127 1 23 51
-
(2003)
Discrete Applied Mathematics
, vol.127
, Issue.1
, pp. 23-51
-
-
Bajaj, C.L.1
Pascucci, V.2
Shamir, A.3
Holt, R.J.4
Netravali, A.N.5
-
25
-
-
0036434222
-
Molecular surface modeling and meshing
-
Laug P., Borouchaki H., Molecular surface modeling and meshing Engineering with Computers 2002 18 3 199 210
-
(2002)
Engineering with Computers
, vol.18
, Issue.3
, pp. 199-210
-
-
Laug, P.1
Borouchaki, H.2
-
26
-
-
0030040323
-
Reduced surface: An efficient way to compute molecular surfaces
-
Sanner M. F., Olson A. J., Spehner J.-C., Reduced surface: an efficient way to compute molecular surfaces Biopolymers 1996 38 3 305 320
-
(1996)
Biopolymers
, vol.38
, Issue.3
, pp. 305-320
-
-
Sanner, M.F.1
Olson, A.J.2
Spehner, J.-C.3
-
28
-
-
33748906998
-
Three-dimensional beta shapes
-
Kim D.-S., Seo J., Kim D., Ryu J., Cho C.-H., Three-dimensional beta shapes Computer-Aided Design 2006 38 11 1179 1191
-
(2006)
Computer-Aided Design
, vol.38
, Issue.11
, pp. 1179-1191
-
-
Kim, D.-S.1
Seo, J.2
Kim, D.3
Ryu, J.4
Cho, C.-H.5
-
29
-
-
36448970902
-
Molecular surfaces on proteins via beta shapes
-
Ryu J., Park R., Kim D.-S., Molecular surfaces on proteins via beta shapes Computer-Aided Design 2007 39 12 1042 1057
-
(2007)
Computer-Aided Design
, vol.39
, Issue.12
, pp. 1042-1057
-
-
Ryu, J.1
Park, R.2
Kim, D.-S.3
-
30
-
-
84867950208
-
Quality mesh generation for molecular skin surfaces using restricted union of balls
-
Cheng H.-L., Shi X., Quality mesh generation for molecular skin surfaces using restricted union of balls Computational Geometry 2009 42 3 196 206
-
(2009)
Computational Geometry
, vol.42
, Issue.3
, pp. 196-206
-
-
Cheng, H.-L.1
Shi, X.2
-
31
-
-
33745587012
-
Quality meshing of implicit solvation models of biomolecular structures
-
Zhang Y., Xu G., Bajaj C. L., Quality meshing of implicit solvation models of biomolecular structures Computer-Aided Geometric Design 2006 23 6 510 530
-
(2006)
Computer-Aided Geometric Design
, vol.23
, Issue.6
, pp. 510-530
-
-
Zhang, Y.1
Xu, G.2
Bajaj, C.L.3
-
36
-
-
85032438582
-
Interpolating subdivision for meshes with arbitrary topology
-
New Orleans, La, USA ACM
-
Zorin D., Schrder P., Sweldens W., Interpolating subdivision for meshes with arbitrary topology Proceedings of the 23rd Annual Conference on Computer Graphics and Interactive Techniques (SIGGRAPH 96) 1996 New Orleans, La, USA ACM 189 192
-
(1996)
Proceedings of the 23rd Annual Conference on Computer Graphics and Interactive Techniques (SIGGRAPH 96)
, pp. 189-192
-
-
Zorin, D.1
Schrder, P.2
Sweldens, W.3
-
37
-
-
4444221565
-
UCSF Chimeraa visualization system for exploratory research and analysis
-
Pettersen E. F., Goddard T. D., Huang C. C., UCSF Chimeraa visualization system for exploratory research and analysis Journal of Computational Chemistry 2004 25 13 1605 1612
-
(2004)
Journal of Computational Chemistry
, vol.25
, Issue.13
, pp. 1605-1612
-
-
Pettersen, E.F.1
Goddard, T.D.2
Huang, C.C.3
-
38
-
-
0031473847
-
SWISS-MODEL and the Swiss-Pdb viewer: An environment for comparative protein modeling
-
Guex N., Peitsch M., SWISS-MODEL and the Swiss-Pdb viewer: an environment for comparative protein modeling Electrophoresis 1997 18 15
-
(1997)
Electrophoresis
, vol.18
, Issue.15
-
-
Guex, N.1
Peitsch, M.2
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