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Volumn 11, Issue , 2010, Pages

Incorporating gene co-expression network in identification of cancer prognosis markers

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL EXPERIMENTS; CO-EXPRESSION NETWORKS; EMPIRICAL PERFORMANCE; ENVIRONMENTAL RISK FACTOR; EXPRESSION MEASUREMENTS; NETWORK CONNECTIVITY; PREDICTION PERFORMANCE; PROFILING TECHNOLOGY;

EID: 77952332655     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-11-271     Document Type: Article
Times cited : (31)

References (26)
  • 4
    • 49949090353 scopus 로고    scopus 로고
    • Penalized feature selection and classification in bioinformatics
    • 10.1093/bib/bbn027, 2733190, 18562478
    • Ma S, Huang J. Penalized feature selection and classification in bioinformatics. Briefings in Bioinformatics 2008, 9:392-403. 10.1093/bib/bbn027, 2733190, 18562478.
    • (2008) Briefings in Bioinformatics , vol.9 , pp. 392-403
    • Ma, S.1    Huang, J.2
  • 6
    • 84888277342 scopus 로고    scopus 로고
    • Weighted Gene Co-Expression Network Analysis
    • Weighted Gene Co-Expression Network Analysis. , http://www.genetics.ucla.edu/labs/horvath/CoexpressionNetwork/
  • 7
    • 0032441150 scopus 로고    scopus 로고
    • Cluster analysis and display of genome-wide expression patterns
    • 10.1073/pnas.95.25.14863, 24541, 9843981
    • Eisen MB, Spellman PT, Brown PO, Botstein D. Cluster analysis and display of genome-wide expression patterns. PNAS 1998, 95:14863-14868. 10.1073/pnas.95.25.14863, 24541, 9843981.
    • (1998) PNAS , vol.95 , pp. 14863-14868
    • Eisen, M.B.1    Spellman, P.T.2    Brown, P.O.3    Botstein, D.4
  • 9
    • 84888282233 scopus 로고    scopus 로고
    • An evaluation of gene module concepts in the interpretation of gene expression data
    • Zhang X, Zhao H. An evaluation of gene module concepts in the interpretation of gene expression data. Technical Report, Yale University 2009,
    • (2009) Technical Report, Yale University
    • Zhang, X.1    Zhao, H.2
  • 10
    • 33847129641 scopus 로고    scopus 로고
    • Gene network interconnectedness and the generalized topological overlap measure
    • 10.1186/1471-2105-8-22, 1797055, 17250769
    • Yip A, Horvath S. Gene network interconnectedness and the generalized topological overlap measure. BMC Bioinformatics 2007, 8:22. 10.1186/1471-2105-8-22, 1797055, 17250769.
    • (2007) BMC Bioinformatics , vol.8 , pp. 22
    • Yip, A.1    Horvath, S.2
  • 11
    • 33645221650 scopus 로고    scopus 로고
    • Gene connectivity, function, and sequence conservation: prediction from modular yeast co-expression networks
    • 10.1186/1471-2164-7-40, 1413526, 16515682
    • Carlson MRJ, Zhang B, Fang Z, Mischel PS, Horvath S, Nelson SF. Gene connectivity, function, and sequence conservation: prediction from modular yeast co-expression networks. BMC Genomics 2006, 7:40. 10.1186/1471-2164-7-40, 1413526, 16515682.
    • (2006) BMC Genomics , vol.7 , pp. 40
    • Carlson, M.R.J.1    Zhang, B.2    Fang, Z.3    Mischel, P.S.4    Horvath, S.5    Nelson, S.F.6
  • 12
    • 34447512704 scopus 로고    scopus 로고
    • Understanding network concepts in modules
    • Dong J, Horvath S. Understanding network concepts in modules. BMC System Biology 2007, 1:24.
    • (2007) BMC System Biology , vol.1 , pp. 24
    • Dong, J.1    Horvath, S.2
  • 16
    • 0042838307 scopus 로고    scopus 로고
    • Breast cancer classification and prognosis based on gene expression profiles from a population based study
    • 10.1073/pnas.1732912100, 193572, 12917485
    • Sotiriou C, Neo SY, McShane LM, Korn EL, Long PM, Jazaeri A, Martiat P, Fox SB, Harris AL, Liu ET. Breast cancer classification and prognosis based on gene expression profiles from a population based study. PNAS 2003, 100:10393-10398. 10.1073/pnas.1732912100, 193572, 12917485.
    • (2003) PNAS , vol.100 , pp. 10393-10398
    • Sotiriou, C.1    Neo, S.Y.2    McShane, L.M.3    Korn, E.L.4    Long, P.M.5    Jazaeri, A.6    Martiat, P.7    Fox, S.B.8    Harris, A.L.9    Liu, E.T.10
  • 21
    • 53849086824 scopus 로고    scopus 로고
    • Sure independence screening for ultrahigh dimensional feature space
    • Fan J, Lv J. Sure independence screening for ultrahigh dimensional feature space. JRSSB 2008, 70:849-911.
    • (2008) JRSSB , vol.70 , pp. 849-911
    • Fan, J.1    Lv, J.2
  • 23
    • 28944437658 scopus 로고    scopus 로고
    • Regularized ROC method for disease classification and biomarker selection with microarray data
    • 10.1093/bioinformatics/bti724, 16234316
    • Ma S, Huang J. Regularized ROC method for disease classification and biomarker selection with microarray data. Bioinformatics 2005, 21:4356-4362. 10.1093/bioinformatics/bti724, 16234316.
    • (2005) Bioinformatics , vol.21 , pp. 4356-4362
    • Ma, S.1    Huang, J.2
  • 24
    • 40049099114 scopus 로고    scopus 로고
    • Defining clusters from a hierarchical cluster tree: the Dynamic Tree Cut package for R
    • 10.1093/bioinformatics/btm563, 18024473
    • Langfelder P, Zhang B, Horvath S. Defining clusters from a hierarchical cluster tree: the Dynamic Tree Cut package for R. Bioinformatics 2008, 24:719-720. 10.1093/bioinformatics/btm563, 18024473.
    • (2008) Bioinformatics , vol.24 , pp. 719-720
    • Langfelder, P.1    Zhang, B.2    Horvath, S.3
  • 25
    • 0037199968 scopus 로고    scopus 로고
    • Hierarchical organization of modularity in metabolic networks
    • 10.1126/science.1073374, 12202830
    • Ravasz E, Somera AL, Mongru DA, Oltvai ZN, Barabasi AL. Hierarchical organization of modularity in metabolic networks. Science 2002, 297:1551-1555. 10.1126/science.1073374, 12202830.
    • (2002) Science , vol.297 , pp. 1551-1555
    • Ravasz, E.1    Somera, A.L.2    Mongru, D.A.3    Oltvai, Z.N.4    Barabasi, A.L.5


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