Computational prediction and experimental validation of signal peptide cleavages in the extracellular proteome of a natural microbial community

Journal of Proteome Research

Volumn 9, Issue 5, 2010, Pages 2148-2159

  Erickson, Brian K ^a,b   Mueller, Ryan S ^d   Verberkmoes, Nathan C ^b   Shah, Manesh ^b   Singer, Steven W ^c   Thelen, Michael P ^c   Banfield, Jillian F ^d   Hettich, Robert L ^b  

^a UNIVERSITY OF TENNESSEE   (United States)

^b OAK RIDGE NATIONAL LABORATORY   (United States)

^c LAWRENCE LIVERMORE NATIONAL LABORATORY   (United States)

^d UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Mass spectrometry; Microbial communities; Multidimensional liquid chromatography; Shotgun proteomics; Signal peptides

Indexed keywords

SIGNAL PEPTIDE;

ACID MINE DRAINAGE; ARTICLE; LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; MICROORGANISM; NONHUMAN; PRIORITY JOURNAL; PROTEOMICS;

ACIDS; BACTERIAL PROTEINS; BIOFILMS; CLUSTER ANALYSIS; DATABASES, PROTEIN; DRAINAGE, SANITARY; ENVIRONMENTAL MICROBIOLOGY; GRAM-NEGATIVE BACTERIA; INDUSTRIAL WASTE; MARKOV CHAINS; PEPTIDE FRAGMENTS; PROTEIN SORTING SIGNALS; PROTEOME; PROTEOMICS; REPRODUCIBILITY OF RESULTS; STATISTICS, NONPARAMETRIC; TANDEM MASS SPECTROMETRY;

EID: 77952040946     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/pr900877a     Document Type: Article

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