Verrucostoma, a new genus in the Bionectriaceae from the Bonin Islands, Japan

Mycologia

Volumn 102, Issue 2, 2010, Pages 418-429

  Hirooka, Yuuri ^a   Kobayashi, Takao ^b   Ono, Tsuyoshi ^c   Rossman, Amy Y ^a   Chaverri, Priscila ^d  

^a AGRICULTURAL RESEARCH SERVICE   (United States)

^b TOKYO UNIVERSITY OF AGRICULTURE   (Japan)

^c Tokyo Metropolitan Agriculture and Forestry Research Center   (Japan)

^d UNIVERSITY OF MARYLAND   (United States)

Author keywords

Ascomycota; Freycinetia; Hypocreales; Molecular systematics; Pandanaceae

Indexed keywords

FUNGUS; MOLECULAR ANALYSIS; MONOCOTYLEDON; MORPHOLOGY; NEW GENUS; TAXONOMY;

BONIN ISLANDS; HONSHU; JAPAN; KANTO; TOKYO [KANTO];

ACREMONIUM (ASCOMYCOTA); ACREMONIUM (HYPOCREACEAE); ASCOMYCOTA; BIONECTRIA; BIONECTRIACEAE; FREYCINETIA; FUNGI; HYPOCREALES; NECTRIA (ASCOMYCETE); NECTRIACEAE; PANDANACEAE;

ACTIN; FUNGAL DNA; RIBOSOME RNA; RNA POLYMERASE II;

ARTICLE; CHEMISTRY; DNA SEQUENCE; GENETICS; HYPOCREALES; ISOLATION AND PURIFICATION; JAPAN; MICROBIOLOGY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PANDANACEAE; PHYLOGENY; PLANT DISEASE; POLYMERASE CHAIN REACTION; SEQUENCE ALIGNMENT; ULTRASTRUCTURE;

ACTINS; BASE SEQUENCE; DNA, FUNGAL; HYPOCREALES; MOLECULAR SEQUENCE DATA; PANDANACEAE; PHYLOGENY; PLANT DISEASES; POLYMERASE CHAIN REACTION; RNA POLYMERASE II; RNA, RIBOSOMAL; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; TOKYO;

EID: 77951972143     PISSN: 00275514     EISSN: 15572536     Source Type: Journal    
DOI: 10.3852/09-137     Document Type: Article

References (33)

1. Castlebury LA, Rossman AY, Sung GH, Hyten AS, Spatafora JW. 2004. Multigene phylogeny reveals new lineage for Stachybotrys chartarum, the indoor air fungus. Mycol Res 108:864-872.
2. Guindon S, Gascuel O. 2003. PhyML-a simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52:696-704.
3. Huelsenbeck JP, Larget B, Miller RE, Ronquist F. 2002. Potential applications and pitfalls of Bayesian inference of phylogeny. Syst Biol 51:673-688.
4. Huelsenbeck JP, Ronquist F, Nielsen ES, Bollback JP. 2001. Bayesian inference of phylogeny and its impact on evolutionary biology. Science 294:2310-2314.
5. Katoh T. 2008. Recent developments in the MAFFT multiple sequence alignment program. Briefings in Bioinformatics 9:286-298.
6. Kirk PM, Cannon PF, David JC, Stalper JA, eds. 2008. Ainsworth & Bisby's Dictionary of the Fungi. 10th ed. Wallingford, UK: CAB International. 771 p.
7. Kolarik M, Kostovcik M, Pazoutova S. 2007. Host range and diversity of the genus Geosmithia (Ascomycota: Hypo- creales) living in association with bark beetles in the Mediterranean area. Mycol Res 111:1298-1310.
8. Kornerup A, Wanscher JH. 1978. Methuen Handbook of Colour. 3rd ed. London: Methuen. 252 p.
9. Maddison WP, Maddison DR. 2009. Mesquite: a modular system for evolutionary analysis. Version 2.6. http://mesquiteproject.org
10. Mantiri FR, Samuels GJ, Rahe JE, Honda BM. 2001. Phylogenetic relationship in Neonectria species having Cylindrocarpon anamorphs inferred from mitochondri- al ribosomal DNA sequences. Can J Bot 79:334-340.
11. Mason-Gamer RJ, Kellogg EA. 1996. Testing for phyloge- netic conflict among molecular data sets in the tribe Triticeae (Gramineae). Syst Biol 45:524-545.
12. McKenzie EHC, Whitton SR, Hyde KD. 2002. The Panda- naceae: Does it have a diverse and unique fungal biota? In: Watling R, Frankland JC, Ainsworth AM, Isaac S
13. Robinson CH, eds. Tropical mycology. Vol. 2, Micromycetes. CABI Publishing. p 51-61.
14. O'Donnell K. 2000. Molecular phylogeny of the Nectria haematococca-Fusarium solani species complex. Myco- logia 92:919-938.
15. Posada D. 2008. jModelTest: phylogenetic model averaging. http://darwin.uvigo.es/
16. Posada D, Buckley TR. 2004. Model selection and model averaging in phylogenetics: advantages of the AIC and Bayesian approaches over likelihood ratio tests. Syst Biol 53:793-808.
17. Reeb V, Lutzoni F, Roux C. 2004. Contribution of RPB2 to multilocus phylogenetic studies of the euascomycetes (Pezizomycotina, Fungi) with special emphasis on lichen-forming Acarosporaceae and evolution of poly- spory. Mol Phylogenet Evol 32:1036-1060.
18. Rossman AY, McKemy JM, Pardo-Schultheiss RA, Schroers H-J. 2001. Molecular studies of the Bionectriaceae using large subunit rDNA sequences. Mycologia 93: 100-110.
19. Rossman AY, Samuels GJ, Rogerson CT, Lowen R. 1999. Genera of Bionectriaceae, Hypocreaceae and Nectriaceae (Hypocreales, Ascomycetes). Studies in Mycology 42: 1-248.
20. Saccardo PA. 1899. Sylloge Fungorum 14. Patavii. 649 p.
21. Samuels GJ. 1988. Fungicolous, lichenicolous and myxomy- ceticolous species of Hypocreopsis, Nectriopsis, Nectria, Peristomialis and Trichonectria. Mem New York Bot Garden 48:1-78.
22. Samuels GJ. 1989. Nectria and Penicillifer. Mycologia 81:347-355.
23. Samuels GJ, Dodd S, Lu B-S, Petrini O, Schroers H-J, Druzhinina I-S. 2006. The Trichoderma koningii aggregate species. Studies in Mycology 56:67-133.
24. Samuels GJ, Lu B-S, Chaverri P, Candoussau F, Fournier J, Rossman A. 2009. Cyanonectria, a new genus for Nectria cyanostoma and its Fusarium anamorph. Mycological Progress 8:49-58.
25. Schoch CL, Crous PW, Wingfield MJ, Wingfield BD. 2000. Phylogeny of Calonectria and selected hypocrealean genera with cylindrical macroconidia. Studies in Mycology 45:45-62.
26. Schroers H-J. 2001. A monograph of Bionectria (Ascomyco- ta, Hypocreales, Bionectriaceae) and its Clonostachys anamorphs. Studies in Mycology 46:1-214.
27. Schroers H-J, Geldenhuis MM, Wingfield MJ, Schoeman MH, Yen Y-F, Shen W-C, Wingfield BD. 2005. Classification of the guava wilt fungus Myxosporium psidii, thepalm pathogen Gliocladium vermoesenii and the persimmon wilt fungus Acremonium diospyri in Nalanthamala. Mycologia 97:375-395.
28. Schroers H-J, Samuels GJ, Gams W. 1999. Stephanonectria, a new genus of the Hypocreales (Bionectriaceae) and its sporodochial anamorph. Sydowia 51:114-126.
29. Stamatakis A, Hoover P, Rougemont J. 2008. A rapid bootstrap algorithm for the RAxML Web servers. Syst Biol 75:758-771.
30. Stem RJ, Bloomer SH. 1992. Subduction zone infancy: examples from the Eocene Izu-Bonin-Mariana and Jurassic California arcs. Geol Soc Am Bull 104:1621-1636.
31. Sung G-H, Hywer-Jones NL, Sung J-M, Luangsa-ard JJ, Shrestha B, Spatafora JW. 2007. Phylogenetic classifi- cation of Cordyceps and the clavicipitaceous fungi. Studies in Mycology 57:5-59.
32. Toyoda T. 2003. Flora of Bonin Islands. Enlarged and revised. Kamakura, Japan: Aboc. 522 p. (in Japanese).
33. Vilgalys R, Hester M. 1990. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bacteriol 172:4238-4246.