NMR structure note: UBA domain of CIP75

Journal of Biomolecular NMR

Volumn 46, Issue 3, 2010, Pages 245-250

  Kieken, Fabien ^a   Spagnol, Gaëlle ^a   Su, Vivian ^b   Lau, Alan F ^b   Sorgen, Paul L ^a  

^a UNIVERSITY OF NEBRASKA MEDICAL CENTER   (United States)

^b UNIVERSITY OF HAWAII CANCER CENTER   (United States)

Author keywords

CIP75; Cx43; UBA domain; Ubiquitin

Indexed keywords

CONNEXIN 43 INTERACTING PROTEIN 75; MEMBRANE PROTEIN; UBIQUITIN; UNCLASSIFIED DRUG;

ARTICLE; CONTROLLED STUDY; MOLECULAR RECOGNITION; NONHUMAN; NUCLEAR MAGNETIC RESONANCE; PRIORITY JOURNAL; PROTEIN ASSEMBLY; PROTEIN BINDING; PROTEIN DEGRADATION; PROTEIN DOMAIN; PROTEIN PROTEIN INTERACTION; PROTEIN STRUCTURE; STRUCTURE ANALYSIS;

AMINO ACID SEQUENCE; ANIMALS; MAGNETIC RESONANCE SPECTROSCOPY; MICE; MOLECULAR SEQUENCE DATA; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; PROTEINS; SEQUENCE HOMOLOGY, AMINO ACID; UBIQUITINS;

EID: 77951667607     PISSN: 09252738     EISSN: 15735001     Source Type: Journal    
DOI: 10.1007/s10858-010-9397-9     Document Type: Article

References (18)

1. AT Brunger PD Adams GM Clore WL DeLano P Gros RW Grosse-Kunstleve JS Jiang J Kuszewski M Nilges NS Pannu RJ Read LM Rice T Simonson GL Warren 1998 Crystallography & NMR system: a new software suite for macromolecular structure determination Acta Crystallogr D Biol Crystallogr 54 Pt 5 905 921 10.1107/S0907444998003254 (Pubitemid 28443603)
2. JD Davidson B Riley EN Burright LA Duvick HY Zoghbi HT Orr 2000 Identification and characterization of an ataxin-1-interacting protein: A1Up, a ubiquitin-like nuclear protein Hum Mol Genet 9 2305 2312
3. F Delaglio S Grzesiek GW Vuister G Zhu J Pfeifer A Bax 1995 NMRPipe: a multidimensional spectral processing system based on UNIX pipes J Biomol NMR 6 277 293 10.1007/BF00197809
4. K Hofmann P Bucher 1996 The UBA domain: a sequence motif present in multiple enzyme classes of the ubiquitination pathway Trends Biochem Sci 21 172 173 (Pubitemid 126335285)
5. JH Hurley S Lee G Prag 2006 Ubiquitin-binding domains Biochem J 399 361 372 10.1042/BJ20061138 (Pubitemid 44672627)
6. BA Johnson RA Blevins 1994 NMR view: a computer program for the visualization and analysis of NMR data J Biomol NMR 4 603 614 10.1007/BF00404272
7. Y Kang N Zhang DM Koepp KJ Walters 2007 Ubiquitin receptor proteins hHR23a and hPLIC2 interact J Mol Biol 365 1093 1101 10.1016/j.jmb.2006.10.056 (Pubitemid 46014186)
8. X Li V Su WE Kurata C Jin AF Lau 2008 A novel connexin43-interacting protein, CIP75, which belongs to the UbL-UBA protein family, regulates the turnover of connexin43 J Biol Chem 283 5748 5759 10.1074/jbc.M709288200
9. JP Linge SI O'Donoghue M Nilges 2001 Automated assignment of ambiguous nuclear overhauser effects with ARIA Methods Enzymol 339 71 90 10.1016/S0076-6879(01)39310-2 (Pubitemid 32666557)
10. JP Linge M Habeck W Rieping M Nilges 2003 ARIA: automated NOE assignment and NMR structure calculation Bioinformatics 19 315 316 10.1093/bioinformatics/ 19.2.315 (Pubitemid 36181930)
11. ED Lowe N Hasan JF Trempe L Fonso ME Noble JA Endicott LN Johnson NR Brown 2006 Structures of the Dsk2 UBL and UBA domains and their complex Acta Crystallogr D Biol Crystallogr 62 177 188 10.1107/S0907444905037777
12. TD Mueller J Feigon 2002 Solution structures of UBA domains reveal a conserved hydrophobic surface for protein-protein interactions J Mol Biol 319 1243 1255 10.1016/S0022-2836(02)00302-9 (Pubitemid 34729432)
13. A Ohno J Jee K Fujiwara T Tenno N Goda H Tochio H Kobayashi H Hiroaki M Shirakawa 2005 Structure of the UBA domain of Dsk2p in complex with ubiquitin molecular determinants for ubiquitin recognition Structure 13 521 532 10.1016/j.str.2005.01.011 (Pubitemid 40503317)
14. S Raasi R Varadan D Fushman CM Pickart 2005 Diverse polyubiquitin interaction properties of ubiquitin-associated domains Nat Struct Mol Biol 12 708 714 10.1038/nsmb962 (Pubitemid 43086277)
15. AF Roth DM Sullivan NG Davis 1998 A large PEST-like sequence directs the ubiquitination, endocytosis, and vacuolar degradation of the yeast a-factor receptor J Cell Biol 142 949 961 10.1083/jcb.142.4.949 (Pubitemid 28402051)
16. V Su AF Lau 2009 Ubiquitin-like and ubiquitin-associated domain proteins: significance in proteasomal degradation Cell Mol Life Sci 66 2819 2833 10.1007/s00018-009-0048-9
17. ES Withers-Ward TD Mueller IS Chen J Feigon 2000 Biochemical and structural analysis of the interaction between the UBA(2) domain of the DNA repair protein HHR23A and HIV-1 Vpr Biochemistry 39 14103 14112 10.1021/bi0017071
18. D Zhang S Raasi D Fushman 2008 Affinity makes the difference: nonselective interaction of the UBA domain of Ubiquilin-1 with monomeric ubiquitin and polyubiquitin chains J Mol Biol 377 162 180 10.1016/j.jmb.2007.12. 029