메뉴 건너뛰기




Volumn 98, Issue 1, 2010, Pages 65-75

Culture-dependent and culture-independent diversity of Actinobacteria associated with the marine sponge Hymeniacidon perleve from the South China Sea

Author keywords

Actinobacteria; Diversity; Marine sponge; Salinispora

Indexed keywords

DNA 16S; RESTRICTION ENDONUCLEASE; RNA 16S;

EID: 77951666993     PISSN: 00036072     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10482-010-9430-8     Document Type: Article
Times cited : (70)

References (34)
  • 1
    • 24944506412 scopus 로고    scopus 로고
    • A survey on bacteria inhabiting the sea surface microlayer of coastal ecosystems
    • DOI 10.1016/j.femsec.2005.04.002, PII S0168649605000991
    • H Agogue EO Casamayor M Bourrain I Obernosterer F Joux GJ Herndl P Lebaron 2005 A survey on bacteria inhabiting the sea surface microlayer of coastal ecosystems FEMS Microbiol Ecol 54 269 280 10.1016/j.femsec.2005.04.002 1:CAS:528:DC%2BD2MXhtVarsb3N 16332325 (Pubitemid 41317926)
    • (2005) FEMS Microbiology Ecology , vol.54 , Issue.2 , pp. 269-280
    • Agogue, H.1    Casamayor, E.O.2    Bourrain, M.3    Obernosterer, I.4    Joux, F.5    Herndl, G.J.6    Lebaron, P.7
  • 3
    • 0036729439 scopus 로고    scopus 로고
    • Molecular evidence for a uniform microbial community in sponges from different oceans
    • DOI 10.1128/AEM.68.9.4431-4440.2002
    • U Hentschel J Hopke M Horn AB Friedrich M Wagner J Hacker BS Moore 2002 Molecular evidence for a uniform microbial community in sponges from different oceans Appl Environ Microbiol 68 4431 4440 10.1128/AEM.68.9.4431-4440.2002 1:CAS:528:DC%2BD38XmvVCjsrs%3D 12200297 (Pubitemid 34988126)
    • (2002) Applied and Environmental Microbiology , vol.68 , Issue.9 , pp. 4431-4440
    • Hentschel, U.1    Hopke, J.2    Horn, M.3    Friedrich, A.B.4    Wagner, M.5    Hacker, J.6    Moore, B.S.7
  • 4
    • 2142857748 scopus 로고    scopus 로고
    • Microbial communities associated with geological Horizons in coastal subseafloor sediments from the sea of Okhotsk
    • DOI 10.1128/AEM.69.12.7224-7235.2003
    • F Inagaki M Suzuki K Takai H Oida T Sakamoto K Aoki KH Nealson K Horikoshi 2003 Microbial communities associated with geological horizons in coastal subseafloor sediments from the sea of okhotsk Appl Environ Microbiol 69 7224 7235 10.1128/AEM.69.12.7224-7235.2003 1:CAS:528:DC%2BD3sXpvFCls74%3D 14660370 (Pubitemid 38585373)
    • (2003) Applied and Environmental Microbiology , vol.69 , Issue.12 , pp. 7224-7235
    • Inagaki, F.1    Suzuki, M.2    Takai, K.3    Oida, H.4    Sakamoto, T.5    Aoki, K.6    Nealson, K.H.7    Horikoshi, K.8
  • 5
    • 33749391642 scopus 로고    scopus 로고
    • Biogeography of the marine actinomycete Salinispora
    • DOI 10.1111/j.1462-2920.2006.01093.x
    • PR Jensen C Mafnas 2006 Biogeography of the marine actinomycete Salinispora Environ Microbiol 8 1881 1888 10.1111/j.1462-2920.2006.01093.x 1:CAS:528:DC%2BD28Xht1WjsL3O 17014488 (Pubitemid 44506885)
    • (2006) Environmental Microbiology , vol.8 , Issue.11 , pp. 1881-1888
    • Jensen, P.R.1    Mafnas, C.2
  • 6
    • 20444488858 scopus 로고    scopus 로고
    • Culturable marine actinomycete diversity from tropical Pacific Ocean sediments
    • DOI 10.1111/j.1462-2920.2005.00785.x
    • PR Jensen E Gontang C Mafnas TJ Mincer W Fenical 2005 Culturable marine actinomycete diversity from tropical Pacific Ocean sediments Environ Microbiol 7 1039 1048 10.1111/j.1462-2920.2005.00785.x 15946301 (Pubitemid 40817162)
    • (2005) Environmental Microbiology , vol.7 , Issue.7 , pp. 1039-1048
    • Jensen, P.R.1    Gontang, E.2    Mafnas, C.3    Mincer, T.J.4    Fenical, W.5
  • 7
    • 33847186292 scopus 로고    scopus 로고
    • Species-specific secondary metabolite production in marine actinomycetes of the genus Salinispora
    • DOI 10.1128/AEM.01891-06
    • PR Jensen PG Williams DC Oh L Zeigler W Fenical 2007 Species-specific secondary metabolite production in marine actinomycetes of the genus Salinispora Appl Environ Microbiol 73 1146 1152 10.1128/AEM.01891-06 1:CAS:528: DC%2BD2sXitlyqsbw%3D 17158611 (Pubitemid 46303231)
    • (2007) Applied and Environmental Microbiology , vol.73 , Issue.4 , pp. 1146-1152
    • Jensen, P.R.1    Williams, P.G.2    Oh, D.-C.3    Zeigler, L.4    Fenical, W.5
  • 9
    • 15944395584 scopus 로고    scopus 로고
    • Marine actinomycetes related to the 'Salinospora' group from the Great Barrier Reef sponge Pseudoceratina clavata
    • DOI 10.1111/j.1462-2920.2005.00716.x
    • TK Kim MJ Garson JA Fuerst 2005 Marine actinomycetes related to the "Salinospora" group from the Great Barrier Reef sponge Pseudoceratina clavata Environ Microbiol 7 509 518 10.1111/j.1462-2920.2005.00716.x 1:CAS:528:DC%2BD2MXjsF2itLc%3D 15816928 (Pubitemid 40441024)
    • (2005) Environmental Microbiology , vol.7 , Issue.4 , pp. 509-518
    • Tae, K.K.1    Garson, M.J.2    Fuerst, J.A.3
  • 10
    • 33644964280 scopus 로고    scopus 로고
    • Discovery of a new source of rifamycin antibiotics in marine sponge Actinobacteria by phylogenetic prediction
    • 10.1128/AEM.72.3.2118-2125.2006 1:CAS:528:DC%2BD28XjsFCmt74%3D 16517661
    • TK Kim AK Hewavitharana PN Shaw JA Fuerst 2006 Discovery of a new source of rifamycin antibiotics in marine sponge Actinobacteria by phylogenetic prediction Appl Environ Microbiol 72 2118 2125 10.1128/AEM.72.3.2118-2125.2006 1:CAS:528:DC%2BD28XjsFCmt74%3D 16517661
    • (2006) Appl Environ Microbiol , vol.72 , pp. 2118-2125
    • Kim, T.K.1    Hewavitharana, A.K.2    Shaw, P.N.3    Fuerst, J.A.4
  • 11
    • 32244440458 scopus 로고    scopus 로고
    • Marinomycins A-D, antitumor-antibiotics of a new structure class from a marine actinomycete of the recently discovered genus "Marinispora"
    • DOI 10.1021/ja0558948
    • HC Kwon CA Kauffman PR Jensen W Fenical 2006 Marinomycins A-D, antitumor-antibiotics of a new structure class from a marine actinomycete of the recently discovered genus "Marinispora" J Am Chem Soc 128 1622 1632 10.1021/ja0558948 1:CAS:528:DC%2BD28XjvFSjtw%3D%3D 16448135 (Pubitemid 43214876)
    • (2006) Journal of the American Chemical Society , vol.128 , Issue.5 , pp. 1622-1632
    • Kwon, H.C.1    Kauffman, C.A.2    Jensen, P.R.3    Fenical, W.4
  • 12
    • 33744537287 scopus 로고    scopus 로고
    • Discovery of novel metabolites from marine actinomycetes
    • DOI 10.1016/j.mib.2006.03.004, PII S1369527406000543
    • KS Lam 2006 Discovery of novel metabolites from marine actinomycetes Curr Opin Microbiol 9 245 251 10.1016/j.mib.2006.03.004 1:CAS:528: DC%2BD28Xltlelt7g%3D 16675289 (Pubitemid 43817620)
    • (2006) Current Opinion in Microbiology , vol.9 , Issue.3 , pp. 245-251
    • Lam, K.S.1
  • 13
    • 33748508882 scopus 로고    scopus 로고
    • Diversity of culturable bacteria in the mucus of the Red Sea coral Fungia scutaria
    • DOI 10.1111/j.1574-6941.2006.00136.x
    • Y Lampert D Kelman Z Dubinsky Y Nitzan RT Hill 2006 Diversity of culturable bacteria in the mucus of the Red Sea coral Fungia scutaria FEMS Microbiol Ecol 58 99 108 10.1111/j.1574-6941.2006.00136.x 1:CAS:528: DC%2BD28XhtVOmtrfL 16958911 (Pubitemid 44359311)
    • (2006) FEMS Microbiology Ecology , vol.58 , Issue.1 , pp. 99-108
    • Lampert, Y.1    Kelman, D.2    Dubinsky, Z.3    Nitzan, Y.4    Hill, R.T.5
  • 17
    • 33646463757 scopus 로고    scopus 로고
    • Cyanosporasides A and B, chloro- and cyano-cyclopenta[a]indene glycosides from the marine actinomycete "Salinispora pacifica"
    • DOI 10.1021/ol052686b
    • DC Oh PG Williams CA Kauffman PR Jensen W Fenical 2006 Cyanosporasides A and B, chloro- and cyano-cyclopenta[a]indene glycosides from the marine actinomycete "Salinispora pacifica" Org Lett 8 1021 1024 10.1021/ol052686b 1:CAS:528:DC%2BD28XhtlOqsLo%3D 16524258 (Pubitemid 43690650)
    • (2006) Organic Letters , vol.8 , Issue.6 , pp. 1021-1024
    • Oh, D.-C.1    Williams, P.G.2    Kauffman, C.A.3    Jensen, P.R.4    Fenical, W.5
  • 18
    • 0033824875 scopus 로고    scopus 로고
    • Phylogenetic comparisons of a coastal bacterioplankton community with its counterparts in open ocean and freshwater systems
    • 1:CAS:528:DC%2BD3cXmvFyrurg%3D 11098073
    • MS Rappe K Vergin SJ Giovannoni 2000 Phylogenetic comparisons of a coastal bacterioplankton community with its counterparts in open ocean and freshwater systems FEMS Microbiol Ecol 33 219 232 1:CAS:528:DC%2BD3cXmvFyrurg%3D 11098073
    • (2000) FEMS Microbiol Ecol , vol.33 , pp. 219-232
    • Rappe, M.S.1    Vergin, K.2    Giovannoni, S.J.3
  • 19
    • 0033108193 scopus 로고    scopus 로고
    • Application of nested polymerase chain reaction for the detection of as yet uncultured organisms of the class Actinobacteria in environmental samples
    • H Rheims E Stackebrandt 1999 Application of nested polymerase chain reaction for the detection of as yet uncultured organisms of the class Actinobacteria in environmental samples Environ Microbiol 1 137 143 10.1046/j.1462-2920.1999.00013.x 1:CAS:528:DyaK1MXktFykurw%3D 11207729 (Pubitemid 129640036)
    • (1999) Environmental Microbiology , vol.1 , Issue.2 , pp. 137-143
    • Rheims, H.1    Stackebrandt, E.2
  • 20
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • 1:STN:280:DyaL1c7ovFSjsA%3D%3D 3447015
    • N Saitou M Nei 1987 The neighbor-joining method: a new method for reconstructing phylogenetic trees Mol Biol Evol 4 406 425 1:STN:280: DyaL1c7ovFSjsA%3D%3D 3447015
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 21
    • 33644812133 scopus 로고    scopus 로고
    • Actinomycete complexes in the rhizosphere of winter rye on soddy podzolic soil
    • IG Shirokikh OV Merzaeva 2005 Actinomycete complexes in the rhizosphere of winter rye on soddy podzolic soil Mikrobiologiia 74 271 277 1:STN:280:DC%2BD2M3pt1OgtQ%3D%3D 15938405 (Pubitemid 44796521)
    • (2005) Mikrobiologiya , vol.74 , Issue.2 , pp. 271-277
    • Shirokikh, I.G.1    Merzaeva, O.V.2
  • 22
    • 0141564899 scopus 로고    scopus 로고
    • New primers for the class Actinobacteria: Application to marine and terrestrial environments
    • DOI 10.1046/j.1462-2920.2003.00483.x
    • JE Stach LA Maldonado AC Ward M Goodfellow AT Bull 2003 New primers for the class Actinobacteria: application to marine and terrestrial environments Environ Microbiol 5 828 841 10.1046/j.1462-2920.2003.00483.x 1:CAS:528:DC%2BD3sXos1Clt7c%3D 14510836 (Pubitemid 37181553)
    • (2003) Environmental Microbiology , vol.5 , Issue.10 , pp. 828-841
    • Stach, J.E.M.1    Maldonado, L.A.2    Ward, A.C.3    Goodfellow, M.4    Bull, A.T.5
  • 23
    • 77951667190 scopus 로고    scopus 로고
    • Antimicrobials
    • A.T. Bull (eds). American Society for Microbiology Press Washington, DC
    • Strohl WB (2003) Antimicrobials. In: Bull AT (ed) Microbial diversity and bioprospecting, Chap 31. American Society for Microbiology Press, Washington, DC
    • (2003) Microbial Diversity and Bioprospecting, Chap 31
    • Strohl, W.B.1
  • 24
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • DOI 10.1093/molbev/msm092
    • K Tamura J Dudley M Nei S Kumar 2007 MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0 Mol Biol Evol 24 1596 1599 10.1093/molbev/msm092 1:CAS:528:DC%2BD2sXpsVGrsL8%3D 17488738 (Pubitemid 47236692)
    • (2007) Molecular Biology and Evolution , vol.24 , Issue.8 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 25
    • 34250733462 scopus 로고    scopus 로고
    • Sponge-associated microorganisms: Evolution, ecology, and biotechnological potential
    • DOI 10.1128/MMBR.00040-06
    • MW Taylor R Radax D Steger M Wagner 2007 Sponge-associated microorganisms: evolution, ecology, and biotechnological potential Microbiol Mol Biol Rev 71 295 347 10.1128/MMBR.00040-06 1:CAS:528:DC%2BD2sXotV2gu7w%3D 17554047 (Pubitemid 46954308)
    • (2007) Microbiology and Molecular Biology Reviews , vol.71 , Issue.2 , pp. 295-347
    • Taylor, M.W.1    Radax, R.2    Steger, D.3    Wagner, M.4
  • 26
    • 2242426937 scopus 로고    scopus 로고
    • The biodiversity of actinomycetes in Lake Baikal
    • DOI 10.1023/A:1015871115187
    • IA Terkina VV Driukker VV Parfenova T Kostornova 2002 The biodiversity of actinomycetes in Lake Baikal Mikrobiologiia 71 404 408 1:STN:280: DC%2BD38zptVGhtQ%3D%3D 12138765 (Pubitemid 41579532)
    • (2002) Microbiology , vol.71 , Issue.3 , pp. 346-349
    • Terkina, I.A.1    Drukker, V.V.2    Parfenova, V.V.3    Kostornova, T.Ya.4
  • 27
    • 33745039442 scopus 로고    scopus 로고
    • Diversity and biotechnological potential of the sponge-associated microbial consortia
    • DOI 10.1007/s10295-006-0123-2
    • G Wang 2006 Diversity and biotechnological potential of the sponge-associated microbial consortia J Ind Microbiol Biotechnol 33 545 551 10.1007/s10295-006-0123-2 1:CAS:528:DC%2BD28XlsVCisrc%3D 16761166 (Pubitemid 43876116)
    • (2006) Journal of Industrial Microbiology and Biotechnology , vol.33 , Issue.7 , pp. 545-551
    • Wang, G.1
  • 29
    • 0035158608 scopus 로고    scopus 로고
    • Phylogenetic diversity of bacteria associated with the marine sponge Rhopaloeides odorabile
    • DOI 10.1128/AEM.67.1.434-444.2001
    • NS Webster KJ Wilson LL Blackall RT Hill 2001 Phylogenetic diversity of bacteria associated with the marine sponge Rhopaloeides odorabile Appl Environ Microbiol 67 434 444 10.1128/AEM.67.1.434-444.2001 1:CAS:528: DC%2BD3MXjtVWlug%3D%3D 11133476 (Pubitemid 32044447)
    • (2001) Applied and Environmental Microbiology , vol.67 , Issue.1 , pp. 434-444
    • Webster, N.S.1    Wilson, K.J.2    Blackall, L.L.3    Hill, R.T.4
  • 31
    • 0021012648 scopus 로고
    • Detailed analysis of the higher-order structure of 16S-like ribosomal ribonucleic acids
    • CR Woese R Gutell R Gupta HF Noller 1983 Detailed analysis of the higher-order structure of 16S-like ribosomal ribonucleic acids Microbiol Rev 47 621 669 1:CAS:528:DyaL2cXhtlCgsbY%3D 6363901 (Pubitemid 14210914)
    • (1983) Microbiological Reviews , vol.47 , Issue.4 , pp. 621-669
    • Woese, C.R.1    Gutell, R.2    Gupta, R.3    Noller, H.F.4
  • 32
    • 53349177551 scopus 로고    scopus 로고
    • Culture-independent nested PCR method reveals high diversity of Actinobacteria associated with the marine sponges Hymeniacidon perleve and Sponge sp
    • 10.1007/s10482-008-9270-y 1:CAS:528:DC%2BD1cXhtF2rs7nI 18670903
    • Y Xin J Huang M Deng W Zhang 2008 Culture-independent nested PCR method reveals high diversity of Actinobacteria associated with the marine sponges Hymeniacidon perleve and Sponge sp Antonie Van Leeuwenhoek 94 533 542 10.1007/s10482-008-9270-y 1:CAS:528:DC%2BD1cXhtF2rs7nI 18670903
    • (2008) Antonie Van Leeuwenhoek , vol.94 , pp. 533-542
    • Xin, Y.1    Huang, J.2    Deng, M.3    Zhang, W.4
  • 33
    • 33747657075 scopus 로고    scopus 로고
    • Culturable actinobacteria from the marine sponge Hymeniacidon perleve: Isolation and phylogenetic diversity by 16S rRNA gene-RFLP analysis
    • DOI 10.1007/s10482-006-9070-1
    • H Zhang YK Lee W Zhang HK Lee 2006 Culturable Actinobacteria from the marine sponge Hymeniacidon perleve: isolation and phylogenetic diversity by 16S rRNA gene-RFLP analysis Antonie Van Leeuwenhoek 90 159 169 10.1007/s10482-006- 9070-1 1:CAS:528:DC%2BD28XotlChu7c%3D 16871424 (Pubitemid 44268882)
    • (2006) Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology , vol.90 , Issue.2 , pp. 159-169
    • Zhang, H.1    Lee, Y.K.2    Zhang, W.3    Lee, H.K.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.