-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
DOI 10.1093/nar/25.17.3389
-
Altschul, S.F., Madden, T.L., Schäffer, A.A., Zhang, J., Zhang, Z., Miller, W., and Lipman, D.J. 1997. Gapped BLAST and PSIBLAST: a new generation of protein database search programs. Nucleic Acids Res. 25(17): 3389-3402. doi:10.1093/nar/25.17. 3389. PMID:9254694. (Pubitemid 27359211)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
0029149127
-
Differentially expressed mRNAs as a consequence of oxidative stress in intact cells
-
doi:10.1016/0014-5793(95)00871- 6. PMID:7556593
-
Ammendola, R., Fiore, F., Esposito, F., Caserta, G., Mesuraca, M., Russo, T., and Cimino, F. 1995. Differentially expressed mRNAs as a consequence of oxidative stress in intact cells. FEBS Lett. 371(3): 209-213. doi:10.1016/0014-5793(95)00871- 6. PMID:7556593.
-
(1995)
FEBS Lett.
, vol.371
, Issue.3
, pp. 209-213
-
-
Ammendola, R.1
Fiore, F.2
Esposito, F.3
Caserta, G.4
Mesuraca, M.5
Russo, T.6
Cimino, F.7
-
3
-
-
0043159108
-
Elongation factors in protein biosynthesis
-
doi:10.1016/S0968-0004(03)00162-2. PMID:12932732
-
Andersen, G.R., Nissen, P., and Nyborg, J. 2003. Elongation factors in protein biosynthesis. Trends Biochem. Sci. 28(8): 434-441. doi:10.1016/S0968- 0004(03)00162-2. PMID:12932732.
-
(2003)
Trends Biochem. Sci.
, vol.28
, Issue.8
, pp. 434-441
-
-
Andersen, G.R.1
Nissen, P.2
Nyborg, J.3
-
4
-
-
0038049073
-
Differential expression of genes influenced by changing salinity using RNA arbitrarily primed PCR in the archaeal halophile Haloferax volcanii
-
PMID:12579374
-
Bidle, K.A. 2003. Differential expression of genes influenced by changing salinity using RNA arbitrarily primed PCR in the archaeal halophile Haloferax volcanii. Extremophiles, 7(1): 1-7. PMID:12579374.
-
(2003)
Extremophiles
, vol.7
, Issue.1
, pp. 1-7
-
-
Bidle, K.A.1
-
5
-
-
0027268185
-
Isolation and characterization of Methanohalophilus portucalensis sp. nov. and DNA reassociation study of the genus Methanohalophilus
-
Boone, D.R., Mathrani, I.M., Liu, Y., Menaia, J.A.G.F., Mah, R.A., and Boone, J.E. 1993. Isolation and characterization of Methanohalophilus portucalensis sp. nov., and DNA reassociation study of the genus Methanohalophilus. Int. J. Syst. Evol. Microbiol. 43(3): 430-437. doi:10.1099/00207713-43-3-430. (Pubitemid 23210421)
-
(1993)
International Journal of Systematic Bacteriology
, vol.43
, Issue.3
, pp. 430-437
-
-
Boone, D.R.1
Mathrani, I.M.2
Liu, Y.3
Menaia, J.A.G.F.4
Mah, R.A.5
Boone, J.E.6
-
6
-
-
0036702994
-
The residue immediately upstream of the RNase P cleavage site is a positive determinant
-
DOI 10.1016/S0300-9084(02)01462-1, PII S0300908402014621
-
Brännvall, M., Fredrik Pettersson, B.M., and Kirsebom, L.A. 2002. The residue immediately upstream of the RNase P cleavage site is a positive determinant. Biochimie, 84(8): 693-703. doi:10. 1016/S0300-9084(02)01462-1471 PMID:12457557. (Pubitemid 35363454)
-
(2002)
Biochimie
, vol.84
, Issue.8
, pp. 693-703
-
-
Brannvall, M.1
Fredrik Pettersson, B.M.2
Kirsebom, L.A.3
-
7
-
-
18444411651
-
The social life of ribosomal proteins
-
doi:10.1111/j.1742-4658. 2005.04651.x. PMID:15853795
-
Brodersen, D.E., and Nissen, P. 2005. The social life of ribosomal proteins. FEBS J. 272(9): 2098-2108. doi:10.1111/j.1742-4658. 2005.04651.x. PMID:15853795.
-
(2005)
FEBS J.
, vol.272
, Issue.9
, pp. 2098-2108
-
-
Brodersen, D.E.1
Nissen, P.2
-
8
-
-
0021802254
-
Polyadenylated, noncapped RNA from the archaebacterium Methanococcus vannielii
-
PMID:2581934
-
Brown, J.W., and Reeve, J.N. 1985. Polyadenylated, noncapped RNA from the archaebacterium Methanococcus vannielii. J. Bacteriol. 162(3): 909-917. PMID:2581934.
-
(1985)
J. Bacteriol.
, vol.162
, Issue.3
, pp. 909-917
-
-
Brown, J.W.1
Reeve, J.N.2
-
9
-
-
0022578767
-
Polyadenylated RNA isolated from the archaebacterium Halobacterium halobium
-
PMID:2422156
-
Brown, J.W., and Reeve, J.N. 1986. Polyadenylated RNA isolated from the archaebacterium Halobacterium halobium. J. Bacteriol. 166(2): 686-688. PMID:2422156.
-
(1986)
J. Bacteriol.
, vol.166
, Issue.2
, pp. 686-688
-
-
Brown, J.W.1
Reeve, J.N.2
-
10
-
-
0030946069
-
Reconstitution of monomethylamine: Coenzyme M methyl transfer with a corrinoid protein and two methyltransferases purified from Methanosarcina barkeri
-
doi:10.1074/jbc. 272.26.16570. PMID:9195968
-
Burke, S.A., and Krzycki, J.A. 1997. Reconstitution of monomethylamine: coenzyme M methyl transfer with a corrinoid protein and two methyltransferases purified from Methanosarcina barkeri. J. Biol. Chem. 272(26): 16570-16577. doi:10.1074/jbc. 272.26.16570. PMID:9195968.
-
(1997)
J. Biol. Chem.
, vol.272
, Issue.26
, pp. 16570-16577
-
-
Burke, S.A.1
Krzycki, J.A.2
-
11
-
-
0031799184
-
Clustered genes encoding the methyltransferases of methanogenesis from monomethylamine
-
PMID:9642198
-
Burke, S.A., Lo, S.L., and Krzycki, J.A. 1998. Clustered genes encoding the methyltransferases of methanogenesis from monomethylamine. J. Bacteriol. 180(13): 3432-3440. PMID:9642198.
-
(1998)
J. Bacteriol.
, vol.180
, Issue.13
, pp. 3432-3440
-
-
Burke, S.A.1
Lo, S.L.2
Krzycki, J.A.3
-
12
-
-
0036069537
-
Gene expression profiling of Escherichia coli growth transitions: An expanded stringent response model
-
doi:10.1046/j.1365-2958.2002.03001.x. PMID:12123445
-
Chang, D.E., Smalley, D.J., and Conway, T. 2002. Gene expression profiling of Escherichia coli growth transitions: an expanded stringent response model. Mol. Microbiol. 45(2): 289-306. doi:10.1046/j.1365-2958.2002.03001.x. PMID:12123445.
-
(2002)
Mol. Microbiol.
, vol.45
, Issue.2
, pp. 289-306
-
-
Chang, D.E.1
Smalley, D.J.2
Conway, T.3
-
13
-
-
0035077507
-
Identification of stress-responsive genes in Streptococcus mutans by differential display reverse transcription-PCR
-
doi:10.1128/IAI.69.4.2493-2501.2001. PMID:11254612
-
Chia, J.S., Lee, Y.Y., Huang, P.T., and Chen, J.Y. 2001. Identification of stress-responsive genes in Streptococcus mutans by differential display reverse transcription-PCR. Infect. Immun. 69(4): 2493-2501. doi:10.1128/IAI.69. 4.2493-2501.2001. PMID:11254612.
-
(2001)
Infect. Immun.
, vol.69
, Issue.4
, pp. 2493-2501
-
-
Chia, J.S.1
Lee, Y.Y.2
Huang, P.T.3
Chen, J.Y.4
-
14
-
-
36048979618
-
Transcriptional profiling of the model Archaeon Halobacterium sp. NRC-1: Responses to changes in salinity and temperature
-
doi:10.1186/1746-1448-3-6. PMID:17651475
-
Coker, J.A., DasSarma, P., Kumar, J., Müller, J.A., and DasSarma, S. 2007. Transcriptional profiling of the model Archaeon Halobacterium sp. NRC-1: responses to changes in salinity and temperature. Saline Systems, 3(1): 6. doi:10.1186/1746-1448-3-6. PMID:17651475.
-
(2007)
Saline Systems
, vol.3
, Issue.1
, pp. 6
-
-
Coker, J.A.1
DasSarma, P.2
Kumar, J.3
Müller, J.A.4
DasSarma, S.5
-
15
-
-
0031015048
-
Down-regulation of mammalian mitochondrial RNAs during oxidative stress
-
doi:10.1016/S0891-5849(96)00380-2. PMID: 8981048
-
Crawford, D.R., Wang, Y., Schools, G.P., Kochheiser, J., and Davies, K.J.A. 1997. Down-regulation of mammalian mitochondrial RNAs during oxidative stress. Free Radic. Biol. Med. 22(3): 551-559. doi:10.1016/S0891-5849(96)00380- 2. PMID: 8981048.
-
(1997)
Free Radic. Biol. Med.
, vol.22
, Issue.3
, pp. 551-559
-
-
Crawford, D.R.1
Wang, Y.2
Schools, G.P.3
Kochheiser, J.4
Davies, K.J.A.5
-
16
-
-
0024557026
-
Physiological and genetic responses of bacteria to osmotic stress
-
PMID: 2651863
-
Csonka, L.N. 1989. Physiological and genetic responses of bacteria to osmotic stress. Microbiol. Rev. 53(1): 121-147. PMID: 2651863.
-
(1989)
Microbiol. Rev.
, vol.53
, Issue.1
, pp. 121-147
-
-
Csonka, L.N.1
-
17
-
-
0032883772
-
Novel reactions involved in energy conservation by methanogenic archaea
-
DOI 10.1016/S0014-5793(99)01026-1, PII S0014579399010261
-
Deppenmeier, U., Lienard, T., and Gottschalk, G. 1999. Novel reactions involved in energy conservation by methanogenic archaea. FEBS Lett. 457(3): 291-297. doi:10.1016/S0014-5793(99)01026-1. PMID:10471795. (Pubitemid 29414709)
-
(1999)
FEBS Letters
, vol.457
, Issue.3
, pp. 291-297
-
-
Deppenmeier, U.1
Lienard, T.2
Gottschalk, G.3
-
18
-
-
0033939643
-
The universal stress protein a of Escherichia coli is required for resistance to DNA damaging agents and is regulated by a RecA/FtsK-dependent regulatory pathway
-
doi:10.1046/j.1365-2958.2000.01979.x. PMID:10931298
-
Diez, A., Gustavsson, N., and Nyström, T. 2000. The universal stress protein A of Escherichia coli is required for resistance to DNA damaging agents and is regulated by a RecA/FtsK-dependent regulatory pathway. Mol. Microbiol. 36(6): 1494-1503. doi:10.1046/j.1365-2958.2000.01979.x. PMID:10931298.
-
(2000)
Mol. Microbiol.
, vol.36
, Issue.6
, pp. 1494-1503
-
-
Diez, A.1
Gustavsson, N.2
Nyström, T.3
-
19
-
-
0022361555
-
Methenyl-tetrahydromethanopterin cyclohydrolase in cell extracts of Methanobacterium
-
doi:10.1016/0003-9861(85)90227-9. PMID:4062290
-
Donnelly, M.I., Escalante-Semerena, J.C., Rinehart, K.L., Jr., and Wolfe, R.S. 1985. Methenyl-tetrahydromethanopterin cyclohydrolase in cell extracts of Methanobacterium. Arch. Biochem. Biophys. 242(2): 430-439. doi:10.1016/0003- 9861(85)90227-9. PMID:4062290.
-
(1985)
Arch. Biochem. Biophys.
, vol.242
, Issue.2
, pp. 430-439
-
-
Donnelly, M.I.1
Escalante-Semerena, J.C.2
Rinehart Jr., K.L.3
Wolfe, R.S.4
-
20
-
-
0028769662
-
How a protein binds B12: A 3.0 a X-ray structure of B12-binding domains of methionine synthase
-
doi:10. 1126/science.7992050. PMID:7992050
-
Drennan, C.L., Huang, S., Drummond, J.T., Matthews, R.G., and Lidwig, M.L. 1994. How a protein binds B12: A 3.0 A X-ray structure of B12-binding domains of methionine synthase. Science (Washington, D.C.), 266(5191): 1669-1674. doi:10. 1126/science.7992050. PMID:7992050.
-
(1994)
Science (Washington, D.C.)
, vol.266
, Issue.5191
, pp. 1669-1674
-
-
Drennan, C.L.1
Huang, S.2
Drummond, J.T.3
Matthews, R.G.4
Lidwig, M.L.5
-
21
-
-
1542358848
-
Repair of oxidative damage in mitochondrial DNA of Saccharomyces cerevisiae: Involvement of the MSH1-dependent pathway
-
doi:10.1016/j. dnarep.2003.12.005. PMID:15010316
-
Dzierzbicki, P., Koprowski, P., Fikus, M.U., Malc, E., and Ciesla, Z. 2004. Repair of oxidative damage in mitochondrial DNA of Saccharomyces cerevisiae: involvement of the MSH1-dependent pathway. DNA Repair (Amst.), 3(4): 403-411. doi:10.1016/j. dnarep.2003.12.005. PMID:15010316.
-
(2004)
DNA Repair (Amst.)
, vol.3
, Issue.4
, pp. 403-411
-
-
Dzierzbicki, P.1
Koprowski, P.2
Fikus, M.U.3
Malc, E.4
Ciesla, Z.5
-
22
-
-
0032416476
-
The role of mismatch repair in the prevention of base pair mutations in Saccharomyces cerevisiae
-
doi:10.1073/pnas.95.26.15487. PMID:9860995
-
Earley, M.C., and Crouse, G.F. 1998. The role of mismatch repair in the prevention of base pair mutations in Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. U.S.A. 95(26): 15487-15491. doi:10.1073/pnas.95.26.15487. PMID:9860995.
-
(1998)
Proc. Natl. Acad. Sci. U.S.A.
, vol.95
, Issue.26
, pp. 15487-15491
-
-
Earley, M.C.1
Crouse, G.F.2
-
23
-
-
0029347075
-
Lysyl-tRNA synthetase
-
PMID:7576245
-
Freist, W., and Gauss, D.H. 1995. Lysyl-tRNA synthetase. Biol. Chem. Hoppe Seyler, 376(8): 451-472. PMID:7576245.
-
(1995)
Biol. Chem. Hoppe Seyler
, vol.376
, Issue.8
, pp. 451-472
-
-
Freist, W.1
Gauss, D.H.2
-
24
-
-
0038317544
-
Identification of Listeria monocytogenes genes involved in salt and alkaline-pH tolerance
-
doi:10.1128/AEM.69.6.3137-3143. 2003. PMID:1278870
-
Gardan, R., Cossart, P., and Labadie, J.; European Listeria Genome Consortium. 2003. Identification of Listeria monocytogenes genes involved in salt and alkaline-pH tolerance. Appl. Environ. Microbiol. 69(6): 3137-3143. doi:10.1128/AEM.69.6.3137-3143. 2003. PMID:1278870.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, Issue.6
, pp. 3137-3143
-
-
Gardan, R.1
Cossart, P.2
Labadie, J.3
Listeria, E.4
Consortium, G.5
-
25
-
-
0033570116
-
The crystal structure of methenyltetrahydromethanopterin cyclohydrolase from the hyperthermophilic archaeon Methanopyrus kandleri
-
DOI 10.1016/S0969-2126(00)80059-3
-
Grabarse, W., Vaupel, M., Vorholt, J.A., Shima, S., Thauer, R.K., Wittershagen, A., et al. 1999. The crystal structure of methenyltetrahydromethanopterin cyclohydrolase from the hyperthermophilic archaeon Methanopyrus kandleri. Structure, 7(10): 1257-1268. doi:10.1016/S0969-2126(00)80059-3. PMID:10545331. (Pubitemid 29482987)
-
(1999)
Structure
, vol.7
, Issue.10
, pp. 1257-1268
-
-
Grabarse, W.1
Vaupel, M.2
Vorholt, J.A.3
Shima, S.4
Thauer, R.K.5
Wittershagen, A.6
Bourenkov, G.7
Bartunik, H.D.8
Ermler, U.9
-
26
-
-
4344573472
-
Life at low water activity
-
1266-1267. doi:10. 1098/rstb.2004.1502. PMID:15306380
-
Grant, W.D. 2004. Life at low water activity. Philos. Trans. R. Soc. Lond. B Biol. Sci. 359(1448): 1249-1266, 1266-1267. doi:10. 1098/rstb.2004.1502. PMID:15306380.
-
(2004)
Philos. Trans. R. Soc. Lond. B Biol. Sci.
, vol.359
, Issue.1448
, pp. 1249-1266
-
-
Grant, W.D.1
-
27
-
-
33645214579
-
Recombination between elongation factor 1a genes from distantly related archaeal lineages
-
doi:10.1073/pnas.0600744103. PMID:16537397
-
Inagaki, Y., Susko, E., and Roger, A.J. 2006. Recombination between elongation factor 1a genes from distantly related archaeal lineages. Proc. Natl. Acad. Sci. U.S.A. 103(12): 4528-4533. doi:10.1073/pnas.0600744103. PMID:16537397.
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, Issue.12
, pp. 4528-4533
-
-
Inagaki, Y.1
Susko, E.2
Roger, A.J.3
-
28
-
-
33646872909
-
DNA mismatch repair system: Classical and fresh roles
-
DOI 10.1111/j.1742-4658.2006.05190.x
-
Jun, S.H., Kim, T.G., and Ban, C. 2006. DNA mismatch repair system: classical and fresh roles. FEBS J. 273(8): 1609-1619. doi:10.1111/j.1742-4658. 2006.05190.x. PMID:16623698. (Pubitemid 43779815)
-
(2006)
FEBS Journal
, vol.273
, Issue.8
, pp. 1609-1619
-
-
Jun, S.-H.1
Kim, T.G.2
Ban, C.3
-
29
-
-
0032143997
-
Diversity of extremely halophilic bacteria
-
doi:10.1007/s007920050071. PMID:9783176
-
Kamekura, M. 1998. Diversity of extremely halophilic bacteria. Extremophiles, 2(3): 289-295. doi:10.1007/s007920050071. PMID:9783176.
-
(1998)
Extremophiles
, vol.2
, Issue.3
, pp. 289-295
-
-
Kamekura, M.1
-
30
-
-
0035852695
-
Hyperosmolality in the form of elevated NaCl but not urea causes DNA damage in murine kidney cells
-
doi:10.1073/pnas.98.4.1999. PMID:11172065
-
Kültz, D., and Chakravarty, D. 2001. Hyperosmolality in the form of elevated NaCl but not urea causes DNA damage in murine kidney cells. Proc. Natl. Acad. Sci. U.S.A. 98(4): 1999-2004. doi:10.1073/pnas.98.4.1999. PMID:11172065.
-
(2001)
Proc. Natl. Acad. Sci. U.S.A.
, vol.98
, Issue.4
, pp. 1999-2004
-
-
Kültz, D.1
Chakravarty, D.2
-
31
-
-
0026540061
-
Glycine betaine and potassium ion are the major compatible solutes in the extremely halophilic methanogen Methanohalophilus strain Z7302
-
PMID:1429470
-
Lai, M.C., and Gunsalus, R.P. 1992. Glycine betaine and potassium ion are the major compatible solutes in the extremely halophilic methanogen Methanohalophilus strain Z7302. J. Bacteriol. 174(22): 7474-7477. PMID:1429470.
-
(1992)
J. Bacteriol.
, vol.174
, Issue.22
, pp. 7474-7477
-
-
Lai, M.C.1
Gunsalus, R.P.2
-
32
-
-
0026010246
-
Distribution of compatible solutes in the halophilic methanogenic archaebacteria
-
PMID:1909318
-
Lai, M.C., Sowers, K.R., Robertson, D.E., Roberts, M.F., and Gunsalus, R.P. 1991. Distribution of compatible solutes in the halophilic methanogenic archaebacteria. J. Bacteriol. 173(17): 5352-5358. PMID:1909318.
-
(1991)
J. Bacteriol.
, vol.173
, Issue.17
, pp. 5352-5358
-
-
Lai, M.C.1
Sowers, K.R.2
Robertson, D.E.3
Roberts, M.F.4
Gunsalus, R.P.5
-
33
-
-
0033007747
-
Regulatory factors associated with synthesis of the osmolyte glycine betaine in the halophilic methanoarchaeon Methanohalophilus portucalensis
-
PMID:9925623
-
Lai, M.C., Yang, D.R., and Chuang, M.J. 1999. Regulatory factors associated with synthesis of the osmolyte glycine betaine in the halophilic methanoarchaeon Methanohalophilus portucalensis. Appl. Environ. Microbiol. 65(2): 828-833. PMID:9925623.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, Issue.2
, pp. 828-833
-
-
Lai, M.C.1
Yang, D.R.2
Chuang, M.J.3
-
34
-
-
0033872766
-
Glycine betaine transport in the obligate halophilic archaeon Methanohalophilus portucalensis
-
doi:10.1128/JB. 182.17.5020-5024.2000. PMID:10940053
-
Lai, M.C., Hong, T.Y., and Gunsalus, R.P. 2000. Glycine betaine transport in the obligate halophilic archaeon Methanohalophilus portucalensis. J. Bacteriol. 182(17): 5020-5024. doi:10.1128/JB. 182.17.5020-5024.2000. PMID:10940053.
-
(2000)
J. Bacteriol.
, vol.182
, Issue.17
, pp. 5020-5024
-
-
Lai, M.C.1
Hong, T.Y.2
Gunsalus, R.P.3
-
35
-
-
0036739253
-
Methanocalculus taiwanensis sp. nov., isolated from an estuarine environment
-
doi:10.1099/ijs.0.01730-0. PMID: 12361289
-
Lai, M.C., Chen, S.C., Shu, C.M., Chiou, M.S., Wang, C.C., Chuang, M.J., et al. 2002. Methanocalculus taiwanensis sp. nov., isolated from an estuarine environment. Int. J. Syst. Evol. Microbiol. 52(5): 1799-1806. doi:10.1099/ijs.0.01730-0. PMID: 12361289.
-
(2002)
Int. J. Syst. Evol. Microbiol.
, vol.52
, Issue.5
, pp. 1799-1806
-
-
Lai, M.C.1
Chen, S.C.2
Shu, C.M.3
Chiou, M.S.4
Wang, C.C.5
Chuang, M.J.6
-
36
-
-
0842345377
-
Methanocalculus chunghsingensis sp. nov., isolated from an estuary and a marine fishpond in Taiwan
-
doi:10.1099/ijs.0.02761-0. PMID:1474247
-
Lai, M.C., Lin, C.C., Yu, P.H., Huang, Y.F., and Chen, S.C. 2004. Methanocalculus chunghsingensis sp. nov., isolated from an estuary and a marine fishpond in Taiwan. Int. J. Syst. Evol. Microbiol. 54(1): 183-189. doi:10.1099/ijs.0.02761-0. PMID:1474247.
-
(2004)
Int. J. Syst. Evol. Microbiol.
, vol.54
, Issue.1
, pp. 183-189
-
-
Lai, M.C.1
Lin, C.C.2
Yu, P.H.3
Huang, Y.F.4
Chen, S.C.5
-
37
-
-
34547898645
-
Effects of substrate and potassium on the betaine-synthesizing enzyme glycine sarcosine dimethylglycine N-methyltransferase from a halophilic methanoarchaeon Methanohalophilus portucalensis
-
doi:10.1016/j.resmic.2006.08. 007. PMID:17098399
-
Lai, M.C., Wang, C.C., Chuang, M.J., Wu, Y.C., and Lee, Y.C. 2006. Effects of substrate and potassium on the betaine-synthesizing enzyme glycine sarcosine dimethylglycine N-methyltransferase from a halophilic methanoarchaeon Methanohalophilus portucalensis. Res. Microbiol. 157(10): 948-955. doi:10.1016/j.resmic.2006.08. 007. PMID:17098399.
-
(2006)
Res. Microbiol.
, vol.157
, Issue.10
, pp. 948-955
-
-
Lai, M.C.1
Wang, C.C.2
Chuang, M.J.3
Wu, Y.C.4
Lee, Y.C.5
-
38
-
-
1642361660
-
The ClpB/ Hsp104 molecular chaperone - A protein disaggregating machine
-
doi:10.1016/j.jsb.2003. 11.016. PMID:15037241
-
Lee, S., Sowa, M.E., Choi, J.M., and Tsai, F.T.F. 2004. The ClpB/ Hsp104 molecular chaperone - a protein disaggregating machine. J. Struct. Biol. 146(1-2): 99-105. doi:10.1016/j.jsb.2003. 11.016. PMID:15037241.
-
(2004)
J. Struct. Biol.
, vol.146
, Issue.1-2
, pp. 99-105
-
-
Lee, S.1
Sowa, M.E.2
Choi, J.M.3
Tsai, F.T.F.4
-
39
-
-
3242887157
-
CD-Search: Protein domain annotations on the fly
-
DOI 10.1093/nar/gkh454
-
Marchler-Bauer, A., and Bryant, S.H. 2004. CD-Search: protein domain annotations on the fly. Nucleic Acids Res. 32: W327-W331. doi:10.1093/nar/ gkh454. (Pubitemid 38997352)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.WEB SERVER ISS
-
-
Marchler-Bauer, A.1
Bryant, S.H.2
-
40
-
-
0032947577
-
Osmoadaptation in Archaea
-
PMID:10223964
-
Martin, D.D., Ciulla, R.A., and Roberts, M.F. 1999. Osmoadaptation in Archaea. Appl. Environ. Microbiol. 65(5): 1815-1825. PMID:10223964.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, Issue.5
, pp. 1815-1825
-
-
Martin, D.D.1
Ciulla, R.A.2
Roberts, M.F.3
-
41
-
-
33845640610
-
Stimulus perception in bacterial signal-transducing histidine kinases
-
DOI 10.1128/MMBR.00020-06
-
Mascher, T., Helmann, J.D., and Unden, G. 2006. Stimulus perception in bacterial signal-transducing histidine kinases. Microbiol. Mol. Biol. Rev. 70(4): 910-938. doi:10.1128/MMBR.00020-06. PMID:17158704.(Pubitemid 44958261)
-
(2006)
Microbiology and Molecular Biology Reviews
, vol.70
, Issue.4
, pp. 910-938
-
-
Mascher, T.1
Helmann, J.D.2
Unden, G.3
-
42
-
-
0008457299
-
Isolation and characterization of a moderately halophilic methanogen from a solar saltern
-
PMID:16346832
-
Mathrani, I.M., and Boone, D.R. 1985. Isolation and characterization of a moderately halophilic methanogen from a solar saltern. Appl. Environ. Microbiol. 50(1): 140-143. PMID:16346832.
-
(1985)
Appl. Environ. Microbiol.
, vol.50
, Issue.1
, pp. 140-143
-
-
Mathrani, I.M.1
Boone, D.R.2
-
43
-
-
0037040962
-
Activation of human MutS homologs by 8-oxo-guanine DNA damage
-
Mazurek, A., Berardini, M., and Fishel, R. 2002. Activation of human MutS homologs by 8-oxo-guanine DNA damage. J. Biol. Chem. 277: 8260-8266.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 8260-8266
-
-
Mazurek, A.1
Berardini, M.2
Fishel, R.3
-
44
-
-
0033760619
-
Screening of genes involved in isooctane tolerance in Saccharomyces cerevisiae by using mRNA differential display
-
doi:10.1128/AEM.66.11.4883-4889. 2000. PMID:11055939
-
Miura, S., Zou, W., Ueda, M., and Tanaka, A. 2000. Screening of genes involved in isooctane tolerance in Saccharomyces cerevisiae by using mRNA differential display. Appl. Environ. Microbiol. 66(11): 4883-4889. doi:10.1128/AEM.66.11.4883-4889. 2000. PMID:11055939.
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, Issue.11
, pp. 4883-4889
-
-
Miura, S.1
Zou, W.2
Ueda, M.3
Tanaka, A.4
-
45
-
-
27844510004
-
Stress response by solute accumulation in Archaea
-
doi:10.1016/j.mib.2005.10.011. PMID:16256422
-
Müller, V., Spanheimer, R., and Santos, H. 2005. Stress response by solute accumulation in Archaea. Curr. Opin. Microbiol. 8(6): 729-736. doi:10.1016/j.mib.2005.10.011. PMID:16256422.
-
(2005)
Curr. Opin. Microbiol.
, vol.8
, Issue.6
, pp. 729-736
-
-
Müller, V.1
Spanheimer, R.2
Santos, H.3
-
46
-
-
33645096805
-
Histidine kinase Hik33 is an important participant in cold-signal transduction in cyanobacteria
-
doi:10.1111/j.1399-3054.2006. 00608.x
-
Murata, N., and Los, D.A. 2006. Histidine kinase Hik33 is an important participant in cold-signal transduction in cyanobacteria. Physiol. Plant. 126(1): 17-27. doi:10.1111/j.1399-3054.2006. 00608.x.
-
(2006)
Physiol. Plant.
, vol.126
, Issue.1
, pp. 17-27
-
-
Murata, N.1
Los, D.A.2
-
47
-
-
18844454755
-
In vivo induced clpB1 gene of Vibrio cholerae is involved in different stress responses and affects in vivo cholera toxin production
-
doi:10.1016/j.bbrc.2005.04. 052. PMID:15883026
-
Nag, S., Das, S., and Chaudhuri, K. 2005. In vivo induced clpB1 gene of Vibrio cholerae is involved in different stress responses and affects in vivo cholera toxin production. Biochem. Biophys. Res. Commun. 331(4): 1365-1373. doi:10.1016/j.bbrc.2005.04. 052. PMID:15883026.
-
(2005)
Biochem. Biophys. Res. Commun.
, vol.331
, Issue.4
, pp. 1365-1373
-
-
Nag, S.1
Das, S.2
Chaudhuri, K.3
-
48
-
-
0033197818
-
MSH2 and MSH6 are required for removal of adenine misincorporated opposite 8-oxo-guanine in S. cerevisiae
-
doi:10.1016/S1097-2765(00)80346-9. PMID:10518225
-
Ni, T.T., Marsischky, G.T., and Kolodner, R.D. 1999. MSH2 and MSH6 are required for removal of adenine misincorporated opposite 8-oxo-guanine in S. cerevisiae. Mol. Cell, 4(3): 439-444. doi:10.1016/S1097-2765(00)80346-9. PMID:10518225.
-
(1999)
Mol. Cell
, vol.4
, Issue.3
, pp. 439-444
-
-
Ni, T.T.1
Marsischky, G.T.2
Kolodner, R.D.3
-
49
-
-
0030066140
-
Effects of overproducing the universal stress protein, UspA, in Escherichia coli K-12
-
PMID:8550536
-
Nyström, T., and Neidhardt, F.C. 1996. Effects of overproducing the universal stress protein, UspA, in Escherichia coli K-12. J. Bacteriol. 178(3): 927-930. PMID:8550536.
-
(1996)
J. Bacteriol.
, vol.178
, Issue.3
, pp. 927-930
-
-
Nyström, T.1
Neidhardt, F.C.2
-
50
-
-
0034641938
-
Crystal structures of mismatch repair protein MutS and its complex with a substrate DNA
-
doi:10.1038/35037509. PMID:11048710
-
Obmolova, G., Ban, C., Hsieh, P., and Yang, W. 2000. Crystal structures of mismatch repair protein MutS and its complex with a substrate DNA. Nature (Lond.), 407(6805): 703-710. doi:10.1038/35037509. PMID:11048710.
-
(2000)
Nature (Lond.)
, vol.407
, Issue.6805
, pp. 703-710
-
-
Obmolova, G.1
Ban, C.2
Hsieh, P.3
Yang, W.4
-
51
-
-
0034005319
-
The trimethylamine methyltransferase gene and multiple dimethylamine methyltransferase genes of Methanosarcina barkeri contain in-frame and read-through amber codons
-
doi:10.1128/JB.182.9.2520-2529.2000. PMID:10762254
-
Paul, L., Ferguson, D.J., Jr., and Krzycki, J.A. 2000. The trimethylamine methyltransferase gene and multiple dimethylamine methyltransferase genes of Methanosarcina barkeri contain in-frame and read-through amber codons. J. Bacteriol. 182(9): 2520-2529. doi:10.1128/JB.182.9.2520-2529.2000. PMID:10762254.
-
(2000)
J. Bacteriol.
, vol.182
, Issue.9
, pp. 2520-2529
-
-
Paul, L.1
Ferguson Jr., D.J.2
Krzycki, J.A.3
-
52
-
-
0028279520
-
Prediction of transmembrane segments in proteins utilising multiple sequence alignments
-
doi:10.1006/jmbi.1994.1220. PMID: 812673
-
Persson, B., and Argos, P. 1994. Prediction of transmembrane segments in proteins utilising multiple sequence alignments. J. Mol. Biol. 237(2): 182-192. doi:10.1006/jmbi.1994.1220. PMID: 812673.
-
(1994)
J. Mol. Biol.
, vol.237
, Issue.2
, pp. 182-192
-
-
Persson, B.1
Argos, P.2
-
53
-
-
35748985540
-
Identification of genes involved in salt adaptation in the archaeon Methanosarcina mazei Gö1 using genome-wide gene expression profiling
-
doi:10.1111/j.1574-6968.2007.00941.x. PMID:17986088
-
Pflüger, K., Ehrenreich, A., Salmon, K., Gunsalus, R.P., Deppenmeier, U., Gottschalk, G., and Müller, V. 2007. Identification of genes involved in salt adaptation in the archaeon Methanosarcina mazei Gö1 using genome-wide gene expression profiling. FEMS Microbiol. Lett. 277(1): 79-89. doi:10.1111/j.1574-6968.2007.00941.x. PMID:17986088.
-
(2007)
FEMS Microbiol. Lett.
, vol.277
, Issue.1
, pp. 79-89
-
-
Pflüger, K.1
Ehrenreich, A.2
Salmon, K.3
Gunsalus, R.P.4
Deppenmeier, U.5
Gottschalk, G.6
Müller, V.7
-
54
-
-
33845606715
-
RNA polyadenylation and degradation in different Archaea: Roles of the exosome and RNase R
-
doi:10.1093/nar/ gkl763. PMID:17065466
-
Portnoy, V., and Schuster, G. 2006. RNA polyadenylation and degradation in different Archaea: roles of the exosome and RNase R. Nucleic Acids Res. 34(20): 5923-5931. doi:10.1093/nar/ gkl763. PMID:17065466.
-
(2006)
Nucleic Acids Res.
, vol.34
, Issue.20
, pp. 5923-5931
-
-
Portnoy, V.1
Schuster, G.2
-
55
-
-
28544443737
-
RNA polyadenylation in Archaea: Not observed in Haloferax while the exosome polynucleotidylates RNA in Sulfolobus
-
DOI 10.1038/sj.embor.7400571, PII 7400571
-
Portnoy, V., Evguenieva-Hackenberg, E., Klein, F., Walter, P., Lorentzen, E., Klug, G., and Schuster, G. 2005. RNA polyadenylation in Archaea: not observed in Haloferax while the exosome polynucleotidylates RNA in Sulfolobus. EMBO Rep. 6(12): 1188-1193. doi:10.1038/sj.embor.7400571. PMID:16282984. (Pubitemid 41741704)
-
(2005)
EMBO Reports
, vol.6
, Issue.12
, pp. 1188-1193
-
-
Portnoy, V.1
Evguenieva-Hackenberg, E.2
Klein, F.3
Walter, P.4
Lorentzen, E.5
Klug, G.6
Schuster, G.7
-
56
-
-
0032551736
-
Oligo(dT)-primed synthesis of cDNA by reverse transcriptase in mycobacteria
-
doi:10.1006/bbrc.1998.8948. PMID:9675115
-
Rindi, L., Lari, N., Gil, M.G., and Garzelli, C. 1998. Oligo(dT)-primed synthesis of cDNA by reverse transcriptase in mycobacteria. Biochem. Biophys. Res. Commun. 248(2): 216-218. doi:10.1006/bbrc.1998.8948. PMID:9675115.
-
(1998)
Biochem. Biophys. Res. Commun.
, vol.248
, Issue.2
, pp. 216-218
-
-
Rindi, L.1
Lari, N.2
Gil, M.G.3
Garzelli, C.4
-
57
-
-
0033614433
-
Search for genes potentially involved in Mycobacterium tuberculosis virulence by mRNA differential display
-
doi:10.1006/bbrc.1999.0591. PMID:10222241
-
Rindi, L., Lari, N., and Garzelli, C. 1999. Search for genes potentially involved in Mycobacterium tuberculosis virulence by mRNA differential display. Biochem. Biophys. Res. Commun. 258(1): 94-101. doi:10.1006/bbrc.1999.0591. PMID:10222241.
-
(1999)
Biochem. Biophys. Res. Commun.
, vol.258
, Issue.1
, pp. 94-101
-
-
Rindi, L.1
Lari, N.2
Garzelli, C.3
-
58
-
-
0032448375
-
Identification of genes differentially expressed in Mycobacterium tuberculosis by differential display PCR
-
doi:10.1006/mpat.1998.0235. PMID:9895269
-
Rivera-Marrero, C.A., Burroughs, M.A., Masse, R.A., Vannberg, F.O., Leimbach, D.L., Roman, J., and Murtagh, J.J., Jr. 1998. Identification of genes differentially expressed in Mycobacterium tuberculosis by differential display PCR. Microb. Pathog. 25(6): 307-316. doi:10.1006/mpat.1998.0235. PMID:9895269.
-
(1998)
Microb. Pathog.
, vol.25
, Issue.6
, pp. 307-316
-
-
Rivera-Marrero, C.A.1
Burroughs, M.A.2
Masse, R.A.3
Vannberg, F.O.4
Leimbach, D.L.5
Roman, J.6
Murtagh Jr., J.J.7
-
59
-
-
0034266648
-
Osmoadaptation and osmoregulation in Archaea
-
doi:10.2741/roberts
-
Roberts, M.F. 2000. Osmoadaptation and osmoregulation in Archaea. Front. Biosci. 5(1): 796-812. doi:10.2741/roberts.
-
(2000)
Front. Biosci.
, vol.5
, Issue.1
, pp. 796-812
-
-
Roberts, M.F.1
-
60
-
-
20444443488
-
Genetically engineered production of 1-desmethylcobyrinic acid, 1-desmethylcobyrinic acid a,c-diamide, and cobyrinic acid a,c-diamide in Escherichia coli implies a role for CbiD in C-1 methylation in the anaerobic pathway to cobalamin
-
doi:10.1074/jbc. M501805200. PMID:15741157
-
Roessner, C.A., Williams, H.J., and Scott, A.I. 2005. Genetically engineered production of 1-desmethylcobyrinic acid, 1-desmethylcobyrinic acid a,c-diamide, and cobyrinic acid a,c-diamide in Escherichia coli implies a role for CbiD in C-1 methylation in the anaerobic pathway to cobalamin. J. Biol. Chem. 280(17): 16748-16753. doi:10.1074/jbc. M501805200. PMID:15741157.
-
(2005)
J. Biol. Chem.
, vol.280
, Issue.17
, pp. 16748-16753
-
-
Roessner, C.A.1
Williams, H.J.2
Scott, A.I.3
-
62
-
-
0031009317
-
Polyadenylation of mRNA in prokaryotes
-
doi:10.1146/annurev.biochem. 66.1.173. PMID:9242905
-
Sarkar, N. 1997. Polyadenylation of mRNA in prokaryotes. Annu. Rev. Biochem. 66(1): 173-197. doi:10.1146/annurev.biochem. 66.1.173. PMID:9242905.
-
(1997)
Annu. Rev. Biochem.
, vol.66
, Issue.1
, pp. 173-197
-
-
Sarkar, N.1
-
63
-
-
0036809294
-
The DnaK/ClpB chaperone system from Thermus thermophilus
-
doi:10.1007/PL00012486. PMID:12475169
-
Schlee, S., and Reinstein, J. 2002. The DnaK/ClpB chaperone system from Thermus thermophilus. Cell. Mol. Life Sci. 59(10): 1598-1606. doi:10.1007/PL00012486. PMID:12475169.
-
(2002)
Cell. Mol. Life Sci.
, vol.59
, Issue.10
, pp. 1598-1606
-
-
Schlee, S.1
Reinstein, J.2
-
64
-
-
34547886561
-
Analysis of the AAA+ chaperone clpB gene and stress-response expression in the halophilic methanogenic archaeon Methanohalophilus portucalensis
-
doi:10.1099/mic.0.2007/007633-0. PMID:17660421
-
Shih, C.J., and Lai, M.C. 2007. Analysis of the AAA+ chaperone clpB gene and stress-response expression in the halophilic methanogenic archaeon Methanohalophilus portucalensis. Microbiology, 153(8): 2572-2583. doi:10.1099/mic.0.2007/007633-0. PMID:17660421.
-
(2007)
Microbiology
, vol.153
, Issue.8
, pp. 2572-2583
-
-
Shih, C.J.1
Lai, M.C.2
-
65
-
-
0036239754
-
Bacterial osmoadaptation: The role of osmolytes in bacterial stress and virulence
-
doi:10.1111/j.1574-6976.2002.tb00598.x
-
Sleator, R.D., and Hill, C. 2002. Bacterial osmoadaptation: the role of osmolytes in bacterial stress and virulence. FEMS Microbiol. Rev. 26(1): 49-71. doi:10.1111/j.1574-6976.2002.tb00598.x.
-
(2002)
FEMS Microbiol. Rev.
, vol.26
, Issue.1
, pp. 49-71
-
-
Sleator, R.D.1
Hill, C.2
-
66
-
-
37949030480
-
Techniques for monitoring methanogen cell growth
-
Methanogens. Edited by K.R. Sowers and H.T. Schreier. Cold Spring Harbor Laboratory Press, Plainview, N.Y.
-
Sowers, K.R. 1995. Techniques for monitoring methanogen cell growth. In Archaea: a laboratory manual. Vol. 2. Methanogens. Edited by K.R. Sowers and H.T. Schreier. Cold Spring Harbor Laboratory Press, Plainview, N.Y. pp. 89-95.
-
(1995)
Archaea: A Laboratory Manual
, vol.2
, pp. 89-95
-
-
Sowers, K.R.1
-
67
-
-
27644484910
-
MutS as a tool for mutation detection
-
PMID:16082411
-
Stanisławska-Sachadyn, A., and Sachadyn, P. 2005. MutS as a tool for mutation detection. Acta Biochim. Pol. 52(3): 575-583. PMID:16082411.
-
(2005)
Acta Biochim. Pol.
, vol.52
, Issue.3
, pp. 575-583
-
-
Stanisławska-Sachadyn, A.1
Sachadyn, P.2
-
68
-
-
0036213692
-
Functional convergence of two lysyl-tRNA synthetases with unrelated topologies
-
doi:10.1038/nsb777. PMID:11887185
-
Terada, T., Nureki, O., Ishitani, R., Ambrogelly, A., Ibba, M., Söll, D., and Yokoyama, S. 2002. Functional convergence of two lysyl-tRNA synthetases with unrelated topologies. Nat. Struct. Biol. 9(4): 257-262. doi:10.1038/nsb777. PMID:11887185.
-
(2002)
Nat. Struct. Biol.
, vol.9
, Issue.4
, pp. 257-262
-
-
Terada, T.1
Nureki, O.2
Ishitani, R.3
Ambrogelly, A.4
Ibba, M.5
Söll, D.6
Yokoyama, S.7
-
69
-
-
33846297682
-
Isolation of stress responsive Psb a gene from rice (Oryza sativa L.) using differential display
-
PMID:17133769
-
Tyagi, A., and Chandra, A. 2006. Isolation of stress responsive Psb A gene from rice (Oryza sativa L.) using differential display. Indian J. Biochem. Biophys. 43(4): 244-246. PMID:17133769.
-
(2006)
Indian J. Biochem. Biophys.
, vol.43
, Issue.4
, pp. 244-246
-
-
Tyagi, A.1
Chandra, A.2
-
70
-
-
33745394713
-
Global transcriptional analysis of Methanosarcina mazei strain Gö1 under different nitrogen availabilities
-
doi:10.1007/s00438-006-0117-9. PMID:16625354
-
Veit, K., Ehlers, C., Ehrenreich, A., Salmon, K., Hovey, R., Gunsalus, R.P., et al. 2006. Global transcriptional analysis of Methanosarcina mazei strain Gö1 under different nitrogen availabilities. Mol. Genet. Genomics, 276(1): 41-55. doi:10.1007/s00438-006-0117-9. PMID:16625354.
-
(2006)
Mol. Genet. Genomics
, vol.276
, Issue.1
, pp. 41-55
-
-
Veit, K.1
Ehlers, C.2
Ehrenreich, A.3
Salmon, K.4
Hovey, R.5
Gunsalus, R.P.6
-
71
-
-
26244452150
-
The Helicobacter pylori MutS protein confers protection from oxidative DNA damage
-
doi:10.1111/j.1365-2958.2005.04833.x. PMID:16164556
-
Wang, G., Alamuri, P., Humayun, M.Z., Taylor, D.E., and Maier, R.J. 2005. The Helicobacter pylori MutS protein confers protection from oxidative DNA damage. Mol. Microbiol. 58(1): 166-176. doi:10.1111/j.1365-2958.2005.04833.x. PMID:16164556.
-
(2005)
Mol. Microbiol.
, vol.58
, Issue.1
, pp. 166-176
-
-
Wang, G.1
Alamuri, P.2
Humayun, M.Z.3
Taylor, D.E.4
Maier, R.J.5
-
72
-
-
0032431024
-
Structure-based assignment of the biochemical function of a hypothetical protein: A test case of structural genomics
-
doi:10.1073/pnas.95.26.15189. PMID:9860944
-
Zarembinski, T.I., Hung, L.W., Mueller-Dieckmann, H.J., Kim, K.K., Yokota, H., Kim, R., and Kim, S.H. 1998. Structure-based assignment of the biochemical function of a hypothetical protein: a test case of structural genomics. Proc. Natl. Acad. Sci. U.S.A. 95(26): 15189-15193. doi:10.1073/pnas.95.26.15189. PMID:9860944.
-
(1998)
Proc. Natl. Acad. Sci. U.S.A.
, vol.95
, Issue.26
, pp. 15189-15193
-
-
Zarembinski, T.I.1
Hung, L.W.2
Mueller-Dieckmann, H.J.3
Kim, K.K.4
Yokota, H.5
Kim, R.6
Kim, S.H.7
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