메뉴 건너뛰기




Volumn 156, Issue 4, 2010, Pages 1052-1059

Nitrogen fixation by the verrucomicrobial methanotroph 'Methylacidiphilum fumariolicum' SolV

Author keywords

[No Author keywords available]

Indexed keywords

ACETYLENE; AMMONIA; NITROGEN; NITROGENASE;

EID: 77950688461     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/mic.0.036061-0     Document Type: Article
Times cited : (101)

References (42)
  • 1
    • 0035461235 scopus 로고    scopus 로고
    • NifH sequences and nitrogen fixation in type i and type II methanotrophs
    • Auman, A. J., Speake, C. C. & Lidstrom, M. E. (2001). nifH sequences and nitrogen fixation in type I and type II methanotrophs. Appl Environ Microbiol 67, 4009-4016.
    • (2001) Appl Environ Microbiol , vol.67 , pp. 4009-4016
    • Auman, A.J.1    Speake, C.C.2    Lidstrom, M.E.3
  • 3
    • 77950649410 scopus 로고    scopus 로고
    • The global methane cycle: Recent advances in understanding the microbial processes involved
    • Conrad, R. (2009). The global methane cycle: recent advances in understanding the microbial processes involved. Environ Microbiol Reports 1, 285-292.
    • (2009) Environ Microbiol Reports , vol.1 , pp. 285-292
    • Conrad, R.1
  • 4
    • 0017198961 scopus 로고
    • Acetylene reduction technique as an assay for nitrogenase activity in methane oxidizing bacterium Methylococcus capsulatus strain Bath
    • Dalton, H. & Whittenbury, R. (1976). Acetylene reduction technique as an assay for nitrogenase activity in methane oxidizing bacterium Methylococcus capsulatus strain Bath. Arch Microbiol 109, 147-151.
    • (1976) Arch Microbiol , vol.109 , pp. 147-151
    • Dalton, H.1    Whittenbury, R.2
  • 5
    • 0002839473 scopus 로고
    • Atmospheric nitrogen fixation by methane-oxidizing bacteria
    • Davis, J. B., Coty, V. F. & Stanley, J. P. (1964). Atmospheric nitrogen fixation by methane-oxidizing bacteria. J Bacteriol 88, 468-472.
    • (1964) J Bacteriol , vol.88 , pp. 468-472
    • Davis, J.B.1    Coty, V.F.2    Stanley, J.P.3
  • 6
    • 0017121778 scopus 로고
    • Invalidity of acetylene reduction assay in alkane utilizing, nitrogen-fixing bacteria
    • De Bont, J. A. M. & Mulder, E. G. (1976). Invalidity of acetylene reduction assay in alkane utilizing, nitrogen-fixing bacteria. Appl Environ Microbiol 31, 640-647.
    • (1976) Appl Environ Microbiol , vol.31 , pp. 640-647
    • De Bont, J.A.M.1    Mulder, E.G.2
  • 8
    • 2942530573 scopus 로고    scopus 로고
    • NifH and NifD phylogenies: An evolutionary basis for understanding nitrogen fixation capabilities of methanotrophic bacteria
    • Dedysh, S. N., Ricke, P. & Liesack, W. (2004). NifH and NifD phylogenies: an evolutionary basis for understanding nitrogen fixation capabilities of methanotrophic bacteria. Microbiology 150, 1301-1313. (Pubitemid 38744733)
    • (2004) Microbiology , vol.150 , Issue.5 , pp. 1301-1313
    • Dedysh, S.N.1    Ricke, P.2    Liesack, W.3
  • 9
    • 70350134633 scopus 로고    scopus 로고
    • Deep-sea Archaea fix and share nitrogen in methane-consuming microbial consortia
    • Dekas, A. E., Poretsky, R. S. & Orphan, V. J. (2009). Deep-sea Archaea fix and share nitrogen in methane-consuming microbial consortia. Science 326, 422-426.
    • (2009) Science , vol.326 , pp. 422-426
    • Dekas, A.E.1    Poretsky, R.S.2    Orphan, V.J.3
  • 10
    • 4344704870 scopus 로고    scopus 로고
    • Genetic regulation of biological nitrogen fixation
    • DOI 10.1038/nrmicro954
    • Dixon, R. & Kahn, D. (2004). Genetic regulation of biological nitrogen fixation. Nat Rev Microbiol 2, 621-631. (Pubitemid 39200045)
    • (2004) Nature Reviews Microbiology , vol.2 , Issue.8 , pp. 621-631
    • Dixon, R.1    Kahn, D.2
  • 13
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 14
    • 0030003012 scopus 로고    scopus 로고
    • Methanotrophic bacteria
    • Hanson, R. S. & Hanson, T. E. (1996). Methanotrophic bacteria. Microbiol Rev 60, 439-471.
    • (1996) Microbiol Rev , vol.60 , pp. 439-471
    • Hanson, R.S.1    Hanson, T.E.2
  • 15
    • 48249105854 scopus 로고    scopus 로고
    • Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia
    • Hou, S. B., Makarova, K. S., Saw, J. H. W., Senin, P., Ly, B. V., Zhou, Z. M., Ren, Y., Wang, J. M., Galperin, M. Y. & other authors (2008). Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia. Biol Direct 3, 26.
    • (2008) Biol Direct , vol.3 , pp. 26
    • Hou, S.B.1    Makarova, K.S.2    Saw, J.H.W.3    Senin, P.4    Ly, B.V.5    Zhou, Z.M.6    Ren, Y.7    Wang, J.M.8    Galperin, M.Y.9
  • 16
    • 7744224797 scopus 로고    scopus 로고
    • Structural basis of biological nitrogen fixation
    • Howard, J. B. & Rees, D. C. (1996). Structural basis of biological nitrogen fixation. Chem Rev 96, 2965-2982. (Pubitemid 126641124)
    • (1996) Chemical Reviews , vol.96 , Issue.7 , pp. 2965-2982
    • Howard, J.B.1    Rees, D.C.2
  • 17
    • 38349102157 scopus 로고    scopus 로고
    • Methane oxidation at 55°C and pH 2 by a thermoacidophilic bacterium belonging to the Verrucomicrobia phylum
    • Islam, T., Jensen, S., Reigstad, L. J., Larsen, O. & Birkeland, N. K. (2008). Methane oxidation at 55°C and pH 2 by a thermoacidophilic bacterium belonging to the Verrucomicrobia phylum. Proc Natl Acad Sci USA 105, 300-304.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 300-304
    • Islam, T.1    Jensen, S.2    Reigstad, L.J.3    Larsen, O.4    Birkeland, N.K.5
  • 18
    • 0017799179 scopus 로고
    • Nitrogen fixation by Thiobacillus ferrooxidans
    • Mackintosh, M. E. (1978). Nitrogen fixation by Thiobacillus ferrooxidans. J Gen Microbiol 105, 215-218.
    • (1978) J Gen Microbiol , vol.105 , pp. 215-218
    • Mackintosh, M.E.1
  • 19
    • 0021018188 scopus 로고
    • Nitrogen fixation in obligate methanotrophs
    • Murrell, J. C. & Dalton, H. (1983). Nitrogen fixation in obligate methanotrophs. J Gen Microbiol 129, 3481-3486.
    • (1983) J Gen Microbiol , vol.129 , pp. 3481-3486
    • Murrell, J.C.1    Dalton, H.2
  • 21
    • 49649127596 scopus 로고    scopus 로고
    • Physiology, biochemistry and molecular biology of nitrogen fixation
    • Edited by H. Bothe, S. J. Ferguson 8t W. E. Newton. Amsterdam: Elsevier
    • Newton, W. E. (2007). Physiology, biochemistry and molecular biology of nitrogen fixation. In Biology of The Nitrogen Cycle, pp. 109-129. Edited by H. Bothe, S. J. Ferguson 8t W. E. Newton. Amsterdam: Elsevier.
    • (2007) Biology of the Nitrogen Cycle , pp. 109-129
    • Newton, W.E.1
  • 22
    • 0028791103 scopus 로고
    • The potential for diazotrophy in iron-and sulfur-oxidizing acidophilic bacteria
    • Norris, P. R., Murrell, J. C. & Hinson, D. (1995). The potential for diazotrophy in iron-and sulfur-oxidizing acidophilic bacteria. Arch Microbiol 164, 294-300.
    • (1995) Arch Microbiol , vol.164 , pp. 294-300
    • Norris, P.R.1    Murrell, J.C.2    Hinson, D.3
  • 23
    • 0002017726 scopus 로고
    • NifH genes in the obligate methane oxidizing bacteria
    • Oakley, C. J. & Murrell, J. C. (1988). nifH genes in the obligate methane oxidizing bacteria. FEMS Microbiol Lett 49, 53-57.
    • (1988) FEMS Microbiol Lett , vol.49 , pp. 53-57
    • Oakley, C.J.1    Murrell, J.C.2
  • 24
    • 0026131772 scopus 로고
    • Cloning of nitrogenase structural genes from the obligate methanotroph Methylococcus capsulatus (Bath)
    • Oakley, C. J. & Murrell, J. C. (1991). Cloning of nitrogenase structural genes from the obligate methanotroph Methylococcus capsulatus (Bath). FEMS Microbiol Lett 62, 121-126.
    • (1991) FEMS Microbiol Lett , vol.62 , pp. 121-126
    • Oakley, C.J.1    Murrell, J.C.2
  • 27
    • 0012994026 scopus 로고
    • The evolution of biological nitrogen fixation
    • Edited by H. Bothe., F. J. de Bruijn & W. E. Newton. Stuttgart: Gustav Fischer
    • Postgate, J. R. & Eady, R. R. (1988). The evolution of biological nitrogen fixation. In Nitrogen Fixation: Hundred Years After, pp. 31-40. Edited by H. Bothe., F. J. de Bruijn & W. E. Newton. Stuttgart: Gustav Fischer.
    • (1988) Nitrogen Fixation: Hundred Years after , pp. 31-40
    • Postgate, J.R.1    Eady, R.R.2
  • 29
    • 0019262924 scopus 로고
    • Oxygen and hydrogen in biological nitrogen fixation
    • Robson, R. L. & Postgate, J. R. (1980). Oxygen and hydrogen in biological nitrogen fixation. Annu Rev Microbiol 34, 183-207.
    • (1980) Annu Rev Microbiol , vol.34 , pp. 183-207
    • Robson, R.L.1    Postgate, J.R.2
  • 30
    • 0030789897 scopus 로고    scopus 로고
    • Regulation of nitrogen fixation by ammonium in diazotrophic species of proteobacteria
    • DOI 10.1016/S0038-0717(96)00238-6, PII S0038071796002386
    • Rudnick, P., Meletzus, D., Green, A., He, L. H. & Kennedy, C. (1997). Regulation of nitrogen fixation by ammonium in diazotrophic species of proteobacteria. Soil Biol Biochem 29, 831-841. (Pubitemid 27299411)
    • (1997) Soil Biology and Biochemistry , vol.29 , Issue.5-6 , pp. 831-841
    • Rudnick, P.1    Meletzus, D.2    Green, A.3    He, L.4    Kennedy, C.5
  • 31
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saltou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saltou, N.1    Nei, M.2
  • 32
    • 0018364397 scopus 로고
    • Ferredoxin degradation in growing Clostridium pasteurianum during periods of iron deprivation
    • DOI 10.1007/BF00413277
    • Schönheit, P., Brandis, A. & Thauer, R. K. (1979). Ferredoxin degradation in growing Clostridium pasteurianum during periods of iron deprivation. Arch Microbiol 120, 73-76. (Pubitemid 9233390)
    • (1979) Archives of Microbiology , vol.120 , Issue.1 , pp. 73-76
    • Schoenheit, P.1    Brandis, A.2    Thauer, R.K.3
  • 33
    • 0024262354 scopus 로고
    • Characteristics of a nitrogen fixing methanotroph, Methylocystis T-1
    • Takeda, K. (1988). Characteristics of a nitrogen fixing methanotroph, Methylocystis T-1. Antonie Van Leeuwenhoek 54, 521-534.
    • (1988) Antonie Van Leeuwenhoek , vol.54 , pp. 521-534
    • Takeda, K.1
  • 34
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • DOI 10.1093/molbev/msm092
    • Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007). MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599. (Pubitemid 47236692)
    • (2007) Molecular Biology and Evolution , vol.24 , Issue.8 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 35
    • 0016162059 scopus 로고
    • Cathepsin B2 measurement by sensitive fluorometric ammonia analysis
    • Taylor, S., Ninjoor, V., Dowd, D. M. & Tappel, A. L. (1974). Cathepsin B2 measurement by sensitive fluorometric ammonia analysis. Anal Biochem 60, 153-162.
    • (1974) Anal Biochem , vol.60 , pp. 153-162
    • Taylor, S.1    Ninjoor, V.2    Dowd, D.M.3    Tappel, A.L.4
  • 36
    • 0021125333 scopus 로고
    • Nitrogen metabolism in a new obligate methanotroph, 'Methylosinus' strain 6
    • Toukdarian, A. E. & Lidstrom, M. E. (1984). Nitrogen metabolism in a new obligate methanotroph, 'Methylosinus' strain 6. J Gen Microbiol 130, 1827-1837.
    • (1984) J Gen Microbiol , vol.130 , pp. 1827-1837
    • Toukdarian, A.E.1    Lidstrom, M.E.2
  • 37
    • 26844447711 scopus 로고    scopus 로고
    • Genome-directed isolation of the key nitrogen fixer Leptospirillum ferrodiazotrophum sp. nov. from an acidophilic microbial community
    • DOI 10.1128/AEM.71.10.6319-6324.2005
    • Tyson, G. W., Lo, I., Baker, B. J., Allen, E. E., Hugenholtz, P. & Banfield, J. F. (2005). Genome-directed isolation of the key nitrogen fixer Leptospirillum ferrodiazotrophum sp. nov. from an acidophilic microbial community. Appl Environ Microbiol 71, 6319-6324. (Pubitemid 41456932)
    • (2005) Applied and Environmental Microbiology , vol.71 , Issue.10 , pp. 6319-6324
    • Tyson, G.W.1    Lo, I.2    Baker, B.J.3    Allen, E.E.4    Hugenholtz, P.5    Banfield, J.F.6
  • 38
    • 33744927902 scopus 로고    scopus 로고
    • The Planctomycetes, Verrucomicrobia, Chlamydiae and sister phyla comprise a superphylum with biotechnological and medical relevance
    • DOI 10.1016/j.copbio.2006.05.005, PII S0958166906000644, Environmental Biotechnology/Energy Biotechnology
    • Wagner, M. & Horn, M. (2006). The Planctomycetes, Verrucomicrobia, Chlamydiae and sister phyla comprise a superphylum with biotechnological and medical relevance. Curr Opin Biotechnol 17, 241-249. (Pubitemid 43850263)
    • (2006) Current Opinion in Biotechnology , vol.17 , Issue.3 , pp. 241-249
    • Wagner, M.1    Horn, M.2
  • 40
    • 0001975986 scopus 로고
    • Phylogenetic classification of nitrogen-fixing organisms
    • Edited by G. Stacey, H. J. Evans & R. H. Burris. New York: Chapman & Hall
    • Young, J. P. W. (1992). Phylogenetic classification of nitrogen-fixing organisms. In Biological Nitrogen Fixation, pp. 43-86. Edited by G. Stacey, H. J. Evans & R. H. Burris. New York: Chapman & Hall.
    • (1992) Biological Nitrogen Fixation , pp. 43-86
    • Young, J.P.W.1
  • 41
    • 0038234799 scopus 로고    scopus 로고
    • Nitrogenase gene diversity and microbial community structure: A cross-system comparison
    • DOI 10.1046/j.1462-2920.2003.00451.x
    • Zehr, J. P., Jenkins, B. D., Short, S. M. & Steward, G. F. (2003). Nitrogenase gene diversity and microbial community structure: a cross-system comparison. Environ Microbiol 5, 539-554. (Pubitemid 36832210)
    • (2003) Environmental Microbiology , vol.5 , Issue.7 , pp. 539-554
    • Zehr, J.P.1    Jenkins, B.D.2    Short, S.M.3    Steward, G.F.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.