-
1
-
-
22244466130
-
The structural biology of type II fatty acid biosynthesis
-
DOI 10.1146/annurev.biochem.74.082803.133524
-
White, S. W., Zheng, J., Zhang, Y. M., and Rock, C. O. (2005) The structural biology of type II fatty acid biosynthesis Annu. Rev. Biochem. 74, 791 - 831 (Pubitemid 40995524)
-
(2005)
Annual Review of Biochemistry
, vol.74
, pp. 791-831
-
-
White, S.W.1
Zheng, J.2
Zhang, Y.-M.3
Rock, C.O.4
-
2
-
-
0037992415
-
FapR, a bacterial transcription factor involved in global regulation of membrane lipid biosynthesis
-
DOI 10.1016/S1534-5807(03)00123-0, PII S1534580703001230
-
Schujman, G. E., Paoletti, L., Grossman, A. D., and de Mendoza, D. (2003) FapR, a bacterial transcription factor involved in global regulation of membrane lipid biosynthesis Dev. Cell 4, 663 - 672 (Pubitemid 36564897)
-
(2003)
Developmental Cell
, vol.4
, Issue.5
, pp. 663-672
-
-
Schujman, G.E.1
Paoletti, L.2
Grossman, A.D.3
De Mendoza, D.4
-
3
-
-
33748365008
-
Structural basis of lipid biosynthesis regulation in Gram-positive bacteria
-
DOI 10.1038/sj.emboj.7601284, PII 7601284
-
Schujman, G. E., Guerin, M., Buschiazzo, A., Schaeffer, F., Llarrull, L. I., Reh, G., Vila, A. J., Alzari, P. M., and de Mendoza, D. (2006) Structural basis of lipid biosynthesis regulation in Gram-positive bacteria EMBO J. 25, 4074 - 4083 (Pubitemid 44338748)
-
(2006)
EMBO Journal
, vol.25
, Issue.17
, pp. 4074-4083
-
-
Schujman, G.E.1
Guerin, M.2
Buschiazzo, A.3
Schaeffer, F.4
Llarrull, L.I.5
Reh, G.6
Vila, A.J.7
Alzari, P.M.8
De Mendoza, D.9
-
4
-
-
0015719741
-
The isolation and general properties of Escherichia coli malonyl coenzyme A-acyl carrier protein transacylase
-
Ruch, F. E. and Vagelos, P. R. (1973) The isolation and general properties of Escherichia coli malonyl coenzyme A-acyl carrier protein transacylase J. Biol. Chem. 248, 8086 - 8094
-
(1973)
J. Biol. Chem.
, vol.248
, pp. 8086-8094
-
-
Ruch, F.E.1
Vagelos, P.R.2
-
5
-
-
13444283630
-
Interaction network containing conserved and essential protein complexes in Escherichia coli
-
Butland, G., Peregrin-Alvarez, J. M., Li, J., Yang, W., Yang, X., Canadien, V., Starostine, A., Richards, D., Beattie, B., Krogan, N., Davey, M., Parkinson, J., Greenblatt, J., and Emili, A. (2005) Interaction network containing conserved and essential protein complexes in Escherichia coli Nature 433, 531 - 537
-
(2005)
Nature
, vol.433
, pp. 531-537
-
-
Butland, G.1
Peregrin-Alvarez, J.M.2
Li, J.3
Yang, W.4
Yang, X.5
Canadien, V.6
Starostine, A.7
Richards, D.8
Beattie, B.9
Krogan, N.10
Davey, M.11
Parkinson, J.12
Greenblatt, J.13
Emili, A.14
-
6
-
-
0042737485
-
New partners of acyl carrier protein detected in Escherichia coli by tandem affinity purification
-
Gully, D., Moinier, D., Loiseau, L., and Bouveret, E. (2003) New partners of acyl carrier protein detected in Escherichia coli by tandem affinity purification FEBS Lett. 548, 90 - 96
-
(2003)
FEBS Lett.
, vol.548
, pp. 90-96
-
-
Gully, D.1
Moinier, D.2
Loiseau, L.3
Bouveret, E.4
-
7
-
-
31344443676
-
A protein network for phospholipid synthesis uncovered by a variant of the tandem affinity purification method in Escherichia coli
-
Gully, D. and Bouveret, E. (2006) A protein network for phospholipid synthesis uncovered by a variant of the tandem affinity purification method in Escherichia coli Proteomics 6, 282 - 293
-
(2006)
Proteomics
, vol.6
, pp. 282-293
-
-
Gully, D.1
Bouveret, E.2
-
8
-
-
38849098884
-
Acyl carrier protein: Structure-function relationships in a conserved multifunctional protein family
-
Byers, D. M. and Gong, H. (2007) Acyl carrier protein: structure-function relationships in a conserved multifunctional protein family Biochem. Cell Biol. 85, 649 - 662
-
(2007)
Biochem. Cell Biol.
, vol.85
, pp. 649-662
-
-
Byers, D.M.1
Gong, H.2
-
9
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford, M. M. (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding Anal. Biochem. 72, 248 - 254
-
(1976)
Anal. Biochem.
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
10
-
-
0028882690
-
Cloning, overproduction, and characterization of the Escherichia coli holo-acyl carrier protein synthase
-
Lambalot, R. H. and Walsh, C. T. (1995) Cloning, overproduction, and characterization of the Escherichia coli holo-acyl carrier protein synthase J. Biol. Chem. 270, 24658 - 24661
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 24658-24661
-
-
Lambalot, R.H.1
Walsh, C.T.2
-
11
-
-
0019887843
-
Molecular properties of acyl carrier protein derivatives
-
Rock, C. O., Cronan, J. E., Jr., and Armitage, I. M. (1981) Molecular properties of acyl carrier protein derivatives J. Biol. Chem. 256, 2669 - 2674
-
(1981)
J. Biol. Chem.
, vol.256
, pp. 2669-2674
-
-
Rock, C.O.1
Cronan Jr, J.E.2
Armitage, I.M.3
-
12
-
-
0019345428
-
Acyl carrier protein from Escherichia coli
-
Rock, C. O. and Cronan, J. E. (1981) Acyl carrier protein from Escherichia coli Methods Enzymol. 71 (Part C) 341 - 351
-
(1981)
Methods Enzymol.
, vol.71
, Issue.PART C
, pp. 341-351
-
-
Rock, C.O.1
Cronan, J.E.2
-
13
-
-
42549088343
-
A malonyl-CoA-dependent switch in the bacterial response to a dysfunction of lipid metabolism
-
Schujman, G. E., Altabe, S., and de Mendoza, D. (2008) A malonyl-CoA-dependent switch in the bacterial response to a dysfunction of lipid metabolism Mol. Microbiol. 68, 987 - 996
-
(2008)
Mol. Microbiol.
, vol.68
, pp. 987-996
-
-
Schujman, G.E.1
Altabe, S.2
De Mendoza, D.3
-
14
-
-
0034755426
-
A secondary RNA polymerase sigma factor from Streptococcus pyogenes
-
Opdyke, J. A., Scott, J. R., and Moran, C. P., Jr. (2001) A secondary RNA polymerase sigma factor from Streptococcus pyogenes Mol. Microbiol. 42, 495 - 502
-
(2001)
Mol. Microbiol.
, vol.42
, pp. 495-502
-
-
Opdyke, J.A.1
Scott, J.R.2
Moran Jr, C.P.3
-
15
-
-
68549123439
-
3,5-Diphenylpent-2-enoic acids as allosteric activators of the protein kinase PDK1: Structure-activity relationships and thermodynamic characterization of binding as paradigms for PIF-binding pocket-targeting compounds
-
Stroba, A., Schaeffer, F., Hindie, V., Lopez-Garcia, L., Adrian, I., Frohner, W., Hartmann, R. W., Biondi, R. M., and Engel, M. (2009) 3,5-Diphenylpent-2-enoic acids as allosteric activators of the protein kinase PDK1: structure-activity relationships and thermodynamic characterization of binding as paradigms for PIF-binding pocket-targeting compounds J. Med. Chem. 52, 4683 - 4693
-
(2009)
J. Med. Chem.
, vol.52
, pp. 4683-4693
-
-
Stroba, A.1
Schaeffer, F.2
Hindie, V.3
Lopez-Garcia, L.4
Adrian, I.5
Frohner, W.6
Hartmann, R.W.7
Biondi, R.M.8
Engel, M.9
-
16
-
-
0024356301
-
Rapid measurement of binding constants and heats of binding using a new titration calorimeter
-
Wiseman, T., Williston, S., Brandts, J. F., and Lin, L. N. (1989) Rapid measurement of binding constants and heats of binding using a new titration calorimeter Anal. Biochem. 179, 131 - 137
-
(1989)
Anal. Biochem.
, vol.179
, pp. 131-137
-
-
Wiseman, T.1
Williston, S.2
Brandts, J.F.3
Lin, L.N.4
-
18
-
-
0028103275
-
The CCP4 suite: Programs for protein crystallography
-
Collaborative Computational Project No. 4
-
Collaborative Computational Project No. 4 (1994) The CCP4 suite: Programs for protein crystallography Acta Crystallogr. D, 760 - 763
-
(1994)
Acta Crystallogr. D
, pp. 760-763
-
-
-
19
-
-
37549039510
-
A short history of SHELX
-
Sheldrick, G. M. (2008) A short history of SHELX Acta Crystallogr. A 64, 112 - 122
-
(2008)
Acta Crystallogr. A
, vol.64
, pp. 112-122
-
-
Sheldrick, G.M.1
-
20
-
-
0242460576
-
Generation, representation and flow of phase information in structure determination: Recent developments in and around SHARP 2.0
-
Bricogne, G., Vonrhein, C., Flensburg, C., Schiltz, M., and Paciorek, W. (2003) Generation, representation and flow of phase information in structure determination: recent developments in and around SHARP 2.0 Acta Crystallogr., Sect. D: Biol. Crystallogr. 59, 2023 - 2030
-
(2003)
Acta Crystallogr., Sect. D: Biol. Crystallogr.
, vol.59
, pp. 2023-2030
-
-
Bricogne, G.1
Vonrhein, C.2
Flensburg, C.3
Schiltz, M.4
Paciorek, W.5
-
21
-
-
77949535720
-
Features and development of Coot
-
(2010), (in press)
-
Emsley, P., Lohkamp, B., Scott, W., and Cowtan, K. (2010) Features and development of Coot, Acta Crystallogr. D (in press).
-
Acta Crystallogr. D
-
-
Emsley, P.1
Lohkamp, B.2
Scott, W.3
Cowtan, K.4
-
22
-
-
0032897075
-
Efficient anisotropic refinement of macromolecular structures using FFT
-
Murshudov, G. N., Vagin, A. A., Lebedev, A., Wilson, K. S., and Dodson, E. J. (1999) Efficient anisotropic refinement of macromolecular structures using FFT Acta Crystallogr., Sect. D: Biol. Crystallogr. 55, 247 - 255
-
(1999)
Acta Crystallogr., Sect. D: Biol. Crystallogr.
, vol.55
, pp. 247-255
-
-
Murshudov, G.N.1
Vagin, A.A.2
Lebedev, A.3
Wilson, K.S.4
Dodson, E.J.5
-
23
-
-
0034886054
-
Solution structure of B. subtilis acyl carrier protein
-
Xu, G. Y., Tam, A., Lin, L., Hixon, J., Fritz, C. C., and Powers, R. (2001) Solution structure of B. subtilis acyl carrier protein Structure 9, 277 - 287
-
(2001)
Structure
, vol.9
, pp. 277-287
-
-
Xu, G.Y.1
Tam, A.2
Lin, L.3
Hixon, J.4
Fritz, C.C.5
Powers, R.6
-
24
-
-
57449096570
-
Structural insights from a P450 carrier protein complex reveal how specificity is achieved in the P450(BioI) ACP complex
-
Cryle, M. J. and Schlichting, I. (2008) Structural insights from a P450 carrier protein complex reveal how specificity is achieved in the P450(BioI) ACP complex Proc. Natl. Acad. Sci. U.S.A. 105, 15696 - 15701
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, pp. 15696-15701
-
-
Cryle, M.J.1
Schlichting, I.2
-
25
-
-
0034662753
-
Crystal structures of substrate binding to Bacillus subtilis holo-(acyl carrier protein) synthase reveal a novel trimeric arrangement of molecules resulting in three active sites
-
Parris, K. D., Lin, L., Tam, A., Mathew, R., Hixon, J., Stahl, M., Fritz, C. C., Seehra, J., and Somers, W. S. (2000) Crystal structures of substrate binding to Bacillus subtilis holo-(acyl carrier protein) synthase reveal a novel trimeric arrangement of molecules resulting in three active sites Structure 8, 883 - 895
-
(2000)
Structure
, vol.8
, pp. 883-895
-
-
Parris, K.D.1
Lin, L.2
Tam, A.3
Mathew, R.4
Hixon, J.5
Stahl, M.6
Fritz, C.C.7
Seehra, J.8
Somers, W.S.9
-
26
-
-
33751512907
-
Structural studies of fatty acyl-(acyl carrier protein) thioesters reveal a hydrophobic binding cavity that can expand to fit longer substrates
-
Roujeinikova, A., Simon, W. J., Gilroy, J., Rice, D. W., Rafferty, J. B., and Slabas, A. R. (2007) Structural studies of fatty acyl-(acyl carrier protein) thioesters reveal a hydrophobic binding cavity that can expand to fit longer substrates J. Mol. Biol. 365, 135 - 145
-
(2007)
J. Mol. Biol.
, vol.365
, pp. 135-145
-
-
Roujeinikova, A.1
Simon, W.J.2
Gilroy, J.3
Rice, D.W.4
Rafferty, J.B.5
Slabas, A.R.6
-
27
-
-
0015051392
-
Studies on the mechanism of fatty acid synthesis. XXVI. Purification and properties of malonyl-coenzyme A'acyl carrier protein transacylase of Escherichia coli
-
Joshi, V. C. and Wakil, S. J. (1971) Studies on the mechanism of fatty acid synthesis. XXVI. Purification and properties of malonyl-coenzyme A'acyl carrier protein transacylase of Escherichia coli Arch. Biochem. Biophys. 143, 493 - 505
-
(1971)
Arch. Biochem. Biophys.
, vol.143
, pp. 493-505
-
-
Joshi, V.C.1
Wakil, S.J.2
-
28
-
-
0029045836
-
Regulation of malonyl-CoA metabolism by acyl-acyl carrier protein and beta-ketoacyl-acyl carrier protein synthases in Escherichia coli
-
Heath, R. J. and Rock, C. O. (1995) Regulation of malonyl-CoA metabolism by acyl-acyl carrier protein and beta-ketoacyl-acyl carrier protein synthases in Escherichia coli J. Biol. Chem. 270, 15531 - 15538
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 15531-15538
-
-
Heath, R.J.1
Rock, C.O.2
-
29
-
-
0023644886
-
Acetoacetyl-acyl carrier protein synthase, a potential regulator of fatty acid biosynthesis in bacteria
-
Jackowski, S. and Rock, C. O. (1987) Acetoacetyl-acyl carrier protein synthase, a potential regulator of fatty acid biosynthesis in bacteria J. Biol. Chem. 262, 7927 - 7931
-
(1987)
J. Biol. Chem.
, vol.262
, pp. 7927-7931
-
-
Jackowski, S.1
Rock, C.O.2
-
30
-
-
0020351537
-
Regulation of phospholipid synthesis in Escherichia coli. Composition of the acyl-acyl carrier protein pool in vivo
-
Rock, C. O. and Jackowski, S. (1982) Regulation of phospholipid synthesis in Escherichia coli. Composition of the acyl-acyl carrier protein pool in vivo J. Biol. Chem. 257, 10759 - 10765
-
(1982)
J. Biol. Chem.
, vol.257
, pp. 10759-10765
-
-
Rock, C.O.1
Jackowski, S.2
-
31
-
-
0021112871
-
Ratio of active to inactive forms of acyl carrier protein in Escherichia coli
-
Jackowski, S. and Rock, C. O. (1983) Ratio of active to inactive forms of acyl carrier protein in Escherichia coli J. Biol. Chem. 258, 15186 - 15191
-
(1983)
J. Biol. Chem.
, vol.258
, pp. 15186-15191
-
-
Jackowski, S.1
Rock, C.O.2
-
32
-
-
0022626960
-
Consequences of reduced intracellular coenzyme A content in Escherichia coli
-
Jackowski, S. and Rock, C. O. (1986) Consequences of reduced intracellular coenzyme A content in Escherichia coli J. Bacteriol. 166, 866 - 871
-
(1986)
J. Bacteriol.
, vol.166
, pp. 866-871
-
-
Jackowski, S.1
Rock, C.O.2
-
33
-
-
0035026139
-
Response of Bacillus subtilis to cerulenin and acquisition of resistance
-
Schujman, G. E., Choi, K. H., Altabe, S., Rock, C. O., and de Mendoza, D. (2001) Response of Bacillus subtilis to cerulenin and acquisition of resistance J. Bacteriol. 183, 3032 - 3040
-
(2001)
J. Bacteriol.
, vol.183
, pp. 3032-3040
-
-
Schujman, G.E.1
Choi, K.H.2
Altabe, S.3
Rock, C.O.4
De Mendoza, D.5
-
34
-
-
1642576086
-
Expression of two Escherichia coli acetyl-CoA carboxylase subunits is autoregulated
-
James, E. S. and Cronan, J. E. (2004) Expression of two Escherichia coli acetyl-CoA carboxylase subunits is autoregulated J. Biol. Chem. 279, 2520 - 2527
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 2520-2527
-
-
James, E.S.1
Cronan, J.E.2
-
35
-
-
33645051218
-
Transcriptional regulation of fatty acid biosynthesis in Streptococcus pneumoniae
-
Lu, Y. J. and Rock, C. O. (2006) Transcriptional regulation of fatty acid biosynthesis in Streptococcus pneumoniae Mol. Microbiol. 59, 551 - 566
-
(2006)
Mol. Microbiol.
, vol.59
, pp. 551-566
-
-
Lu, Y.J.1
Rock, C.O.2
-
36
-
-
67650138598
-
Acyl-acyl carrier protein regulates transcription of fatty acid biosynthetic genes via the FabT repressor in Streptococcus pneumoniae
-
Jerga, A. and Rock, C. O. (2009) Acyl-acyl carrier protein regulates transcription of fatty acid biosynthetic genes via the FabT repressor in Streptococcus pneumoniae J. Biol. Chem. 284, 15364 - 15368
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 15364-15368
-
-
Jerga, A.1
Rock, C.O.2
-
37
-
-
66349100178
-
Transcriptional regulation in bacterial membrane lipid synthesis
-
Zhang, Y. M. and Rock, C. O. (2009) Transcriptional regulation in bacterial membrane lipid synthesis J. Lipid Res. 50 (Suppl.) S115 - S119
-
(2009)
J. Lipid Res.
, vol.50
, Issue.SUPPL.
-
-
Zhang, Y.M.1
Rock, C.O.2
|