-
1
-
-
0036773714
-
Synthesis of an unusual polar glycopeptidolipid in glucose-limited culture of Mycobacterium smegmatis
-
Ojha, A. K., Varma, S., and Chatterji, D. (2002) Synthesis of an unusual polar glycopeptidolipid in glucose-limited culture of Mycobacterium smegmatis. Microbiology 148, 3039-3048. (Pubitemid 35243703)
-
(2002)
Microbiology
, vol.148
, Issue.10
, pp. 3039-3048
-
-
Ojha, A.K.1
Varma, S.2
Chatterji, D.3
-
2
-
-
0032924333
-
Adaptation of Mycobacterium smegmatis to stationary phase
-
Smeulders, M. J., Keer, J., Speight, R. A., and Williams, H. D. (1999) Adaptation of Mycobacterium smegmatis to stationary phase. J. Bacteriol. 181, 270-283. (Pubitemid 29013681)
-
(1999)
Journal of Bacteriology
, vol.181
, Issue.1
, pp. 270-283
-
-
Smeulders, M.J.1
Keer, J.2
Speight, R.A.3
Williams, H.D.4
-
3
-
-
0033616769
-
Evolution of microbial diversity during prolonged starvation
-
Finkel, S. E. and Kolter, R. (1999) Evolution of microbial diversity during prolonged starvation. Proc. Natl. Acad. Sci. USA 96, 4023-4027.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 4023-4027
-
-
Finkel, S.E.1
Kolter, R.2
-
4
-
-
31544474634
-
Long-term survival during stationary phase: Evolution and the GASP phenotype
-
Finkel, S. (2006) Long-term survival during stationary phase: evolution and the GASP phenotype. Nat. Rev. Microbiol. 4, 113-120.
-
(2006)
Nat. Rev. Microbiol.
, vol.4
, pp. 113-120
-
-
Finkel, S.1
-
5
-
-
25144510071
-
Global analysis of proteins synthesized by Mycobacterium smegmatis provides direct evidence for physiological heterogeneity in stationary-phase cultures
-
DOI 10.1128/JB.187.19.6691-6700.2005
-
Blokpoel, M. C. J., Smeulders, M. J., Hubbard, J. A. M., Keer, J., and Williams, H. D. (2005) Global analysis of proteins synthesized by Mycobacterium smegmatis provides direct evidence for physiological heterogeneity in stationary-phase cultures. J. Bacteriol. 187, 6691-6700. (Pubitemid 41356242)
-
(2005)
Journal of Bacteriology
, vol.187
, Issue.19
, pp. 6691-6700
-
-
Blokpoel, M.C.J.1
Smeulders, M.J.2
Hubbard, J.A.M.3
Keer, J.4
Williams, H.D.5
-
6
-
-
0036263307
-
Mycobacterium tuberculosis genes induced during infection of human macrophages
-
Dubnau, E., Fontán, P., Manganelli, R., Soares-Appel, S., and Smith, I. (2002) Mycobacterium tuberculosis genes induced during infection of human macrophages. Infect. Immun. 70, 2787-2795.
-
(2002)
Infect. Immun.
, vol.70
, pp. 2787-2795
-
-
Dubnau, E.1
Fontán, P.2
Manganelli, R.3
Soares-Appel, S.4
Smith, I.5
-
7
-
-
34249066244
-
Lipid composition and transcriptional response of Mycobacterium tuberculosis grown under iron-limitation in continuous culture: Identification of a novel wax ester
-
Bacon, J., Dover, L. G., Hatch, K. A., Zhang, Y., Gomes, J. M., Kendall, S., Wernisch, L., Stoker, N. G., Butcher, P. D., Besra, G. S., and Marsh, P. D. (2007) Lipid composition and transcriptional response of Mycobacterium tuberculosis grown under iron-limitation in continuous culture: identification of a novel wax ester. Microbiol. (Reading, Engl.) 153, 1435-1444.
-
(2007)
Microbiol. (Reading, Engl.)
, vol.153
, pp. 1435-1444
-
-
Bacon, J.1
Dover, L.G.2
Hatch, K.A.3
Zhang, Y.4
Gomes, J.M.5
Kendall, S.6
Wernisch, L.7
Stoker, N.G.8
Butcher, P.D.9
Besra, G.S.10
Marsh, P.D.11
-
8
-
-
7944221099
-
What do microarrays really tell us about M. tuberculosis?
-
DOI 10.1016/j.tim.2004.10.005, PII S0966842X04002367
-
Kendall, S. L., Rison, S. C., Movahedzadeh, F., Frita, R., and Stoker, N. G. (2004) What do microarrays really tell us about M. tuberculosis? Trends. Microbiol 12, 537-544. (Pubitemid 39469902)
-
(2004)
Trends in Microbiology
, vol.12
, Issue.12
, pp. 537-544
-
-
Kendall, S.L.1
Rison, S.C.G.2
Movahedzadeh, F.3
Frita, R.4
Stoker, N.G.5
-
9
-
-
33750454114
-
Comparative transcriptional analysis of human macrophages exposed to animal and human isolates of Mycobacterium avium subspecies paratuberculosis with diverse genotypes
-
Motiwala, A. S., Janagama, H. K., Paustian, M. L., Zhu, X., Bannantine, J. P., Kapur, V., and Sreevatsan, S. (2006) Comparative transcriptional analysis of human macrophages exposed to animal and human isolates of Mycobacterium avium subspecies paratuberculosis with diverse genotypes. Infect. Immun. 74, 6046-6056.
-
(2006)
Infect. Immun.
, vol.74
, pp. 6046-6056
-
-
Motiwala, A.S.1
Janagama, H.K.2
Paustian, M.L.3
Zhu, X.4
Bannantine, J.P.5
Kapur, V.6
Sreevatsan, S.7
-
10
-
-
33748621460
-
Transcriptional profile of the immune response in the lungs of patients with active tuberculosis
-
Grassi, M., Bocchino, M., Marruchella, A., Volpe, E., Saltini, C., Colizzi, V., and Mariani, F. (2006) Transcriptional profile of the immune response in the lungs of patients with active tuberculosis. Clin. Immunol. 121, 100-107.
-
(2006)
Clin. Immunol.
, vol.121
, pp. 100-107
-
-
Grassi, M.1
Bocchino, M.2
Marruchella, A.3
Volpe, E.4
Saltini, C.5
Colizzi, V.6
Mariani, F.7
-
11
-
-
34249795472
-
Transcriptomic analysis identifies growth rate modulation as a component of the adaptation of mycobacteria to survival inside the macrophage
-
DOI 10.1128/JB.01787-06
-
Beste, D. J., Laing, E., Bonde, B., Avignone-Rossa, C., Bushell, M. E., and Mcfadden, J. J. (2007) Transcriptomic analysis identifies growth rate modulation as a component of the adaptation of mycobacteria to survival inside the macrophage. J. Bacteriol. 189, 3969-3976. (Pubitemid 46847343)
-
(2007)
Journal of Bacteriology
, vol.189
, Issue.11
, pp. 3969-3976
-
-
Beste, D.J.V.1
Laing, E.2
Bonde, B.3
Avignone-Rossa, C.4
Bushell, M.E.5
McFadden, J.J.6
-
12
-
-
35448983894
-
Comparative transcriptomics reveals key gene expression differences between the human and bovine pathogens of the Mycobacterium tuberculosis complex
-
Golby, P., Hatch, K. A., Bacon, J., Cooney, R., Riley, P., Allnutt, J., Hinds, J., Nunez, J., Marsh, P. D., Hewinson, R. G., and Gordon, S. V. (2007) Comparative transcriptomics reveals key gene expression differences between the human and bovine pathogens of the Mycobacterium tuberculosis complex. Microbiol. (Reading, Engl.) 153, 3323-3336.
-
(2007)
Microbiol. (Reading, Engl.)
, vol.153
, pp. 3323-3336
-
-
Golby, P.1
Hatch, K.A.2
Bacon, J.3
Cooney, R.4
Riley, P.5
Allnutt, J.6
Hinds, J.7
Nunez, J.8
Marsh, P.D.9
Hewinson, R.G.10
Gordon, S.V.11
-
13
-
-
40449111971
-
Quantification of global transcription patterns in prokaryotes using spotted microarrays
-
DOI 10.1186/gb-2007-8-12-r265
-
Sidders, B., Withers, M., Kendall, S. L., Bacon, J., Waddell, S. J., Hinds, J., Golby, P., Movahedzadeh, F., Cox, R. A., Frita, R., Tenbokum, A. M., Wernisch, L., and Stoker, N. G. (2007) Quantification of global transcription patterns in prokaryotes using spotted microarrays. Genome Biol. 8, R265. (Pubitemid 351936414)
-
(2007)
Genome Biology
, vol.8
, Issue.12
-
-
Sidders, B.1
Withers, M.2
Kendall, S.L.3
Bacon, J.4
Waddell, S.J.5
Hinds, J.6
Golby, P.7
Movahedzadeh, F.8
Cox, R.A.9
Frita, R.10
Ten Bokum, A.M.C.11
Wernisch, L.12
Stoker, N.G.13
-
14
-
-
54849439916
-
Transcriptional analysis of diverse strains Mycobacterium avium subspecies paratuberculosis in primary bovine monocyte derived macrophages
-
Zhu, X., Tu, Z. J., Coussens, P. M., Kapur, V., Janagama, H., Naser, S., and Sreevatsan, S. (2008) Transcriptional analysis of diverse strains Mycobacterium avium subspecies paratuberculosis in primary bovine monocyte derived macrophages. Microbes Infect 10, 1274-1282.
-
(2008)
Microbes Infect
, vol.10
, pp. 1274-1282
-
-
Zhu, X.1
Tu, Z.J.2
Coussens, P.M.3
Kapur, V.4
Janagama, H.5
Naser, S.6
Sreevatsan, S.7
-
15
-
-
1842585499
-
The temporal expression profile of Mycobacterium tuberculosis infection in mice
-
Talaat, A. M., Lyons, R., Howard, S. T., and Johnston, S. A. (2004) The temporal expression profile of Mycobacterium tuberculosis infection in mice. Proc. Natl. Acad. Sci. USA 101, 4602-4607.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 4602-4607
-
-
Talaat, A.M.1
Lyons, R.2
Howard, S.T.3
Johnston, S.A.4
-
16
-
-
31844441997
-
Unique transcriptome signature of Mycobacterium tuberculosis in pulmonary tuberculosis
-
Rachman, H., Strong, M., Ulrichs, T., Grode, L., Schuchhardt, J., Mollenkopf, H., Kosmiadi, G. A., Eisenberg, D., and Kaufmann, S. H. (2006) Unique transcriptome signature of Mycobacterium tuberculosis in pulmonary tuberculosis. Infect. Immun. 74, 1233-1242.
-
(2006)
Infect. Immun.
, vol.74
, pp. 1233-1242
-
-
Rachman, H.1
Strong, M.2
Ulrichs, T.3
Grode, L.4
Schuchhardt, J.5
Mollenkopf, H.6
Kosmiadi, G.A.7
Eisenberg, D.8
Kaufmann, S.H.9
-
18
-
-
0030811135
-
Protection of DNA during oxidative stress by the nonspecific DNA- Binding protein Dps
-
Martinez, A. and Kolter, R. (1997) Protection of DNA during oxidative stress by the nonspecific DNA-binding protein Dps. J. Bacteriol. 179, 5188-5194. (Pubitemid 27340555)
-
(1997)
Journal of Bacteriology
, vol.179
, Issue.16
, pp. 5188-5194
-
-
Martinez, A.1
Kolter, R.2
-
19
-
-
70350176497
-
Streptomyces coelicolor Dps-like proteins: Differential dual roles in response to stress during vegetative growth and in nucleoid condensation during reproductive cell division
-
Facey, P. D., Hitchings, M. D., Saavedra-Garcia, P., Fernandez- Martinez, L., Dyson, P. J., and Del Sol, R. (2009) Streptomyces coelicolor Dps-like proteins: differential dual roles in response to stress during vegetative growth and in nucleoid condensation during reproductive cell division. Mol. Microbiol. 73, 1186-1202.
-
(2009)
Mol. Microbiol.
, vol.73
, pp. 1186-1202
-
-
Facey, P.D.1
Hitchings, M.D.2
Saavedra-Garcia, P.3
Fernandez- Martinez, L.4
Dyson, P.J.5
Del Sol, R.6
-
20
-
-
65149086817
-
Crystal structure of E. coli RecE protein reveals a toroidal tetramer for processing double- stranded DNA breaks
-
Zhang, J., Xing, X., Herr, A. B., and Bell, C. E. (2009) Crystal structure of E. coli RecE protein reveals a toroidal tetramer for processing double- stranded DNA breaks. Structure 17, 690-702.
-
(2009)
Structure
, vol.17
, pp. 690-702
-
-
Zhang, J.1
Xing, X.2
Herr, A.B.3
Bell, C.E.4
-
21
-
-
67650273080
-
Stepwise evolution of the herpes simplex virus origin binding protein and origin of replication
-
Olsson, M., Tang, K. W., Persson, C., Wilhelmsson, L. M., Billeter, M., and Elias, P. (2009) Stepwise evolution of the herpes simplex virus origin binding protein and origin of replication. J. Biol. Chem. 284, 16246-16255.
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 16246-16255
-
-
Olsson, M.1
Tang, K.W.2
Persson, C.3
Wilhelmsson, L.M.4
Billeter, M.5
Elias, P.6
-
22
-
-
62549160340
-
Rad52 promotes second-end DNA capture in double-stranded break repair to form complement-stabilized joint molecules
-
Nimonkar, A. V., Sica, R. A., and Kowalczykowski, S. C. (2009) Rad52 promotes second-end DNA capture in double-stranded break repair to form complement-stabilized joint molecules. Proc. Natl. Acad. Sci. USA 106, 3077-3082.
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 3077-3082
-
-
Nimonkar, A.V.1
Sica, R.A.2
Kowalczykowski, S.C.3
-
23
-
-
0027083350
-
A novel DNA-binding protein with regulatory and protective roles in starved Escherichia coli
-
Almirón, M., Link, A. J., Furlong, D., and Kolter, R. (1992) A novel DNA-binding protein with regulatory and protective roles in starved Escherichia coli. Genes Dev 6, 2646-2654. (Pubitemid 23052891)
-
(1992)
Genes and Development
, vol.6
, Issue.12 B
, pp. 2646-2654
-
-
Almiron, M.1
Link, A.J.2
Furlong, D.3
Kolter, R.4
-
24
-
-
0038813712
-
Bimodal protection of DNA by Mycobacterium smegmatis DNA-binding protein from stationary phase cells
-
Gupta, S. and Chatterji, D. (2003) Bimodal protection of DNA by Mycobacterium smegmatis DNA-binding protein from stationary phase cells. J. Biol. Chem. 278, 5235-5241.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 5235-5241
-
-
Gupta, S.1
Chatterji, D.2
-
25
-
-
0842269876
-
Identification of an iron-binding protein of the Dps family expressed by Streptococcus thermophilus
-
Nicodème, M., Perrin, C., Hols, P., Bracquart, P., and Gaillard, J. L. (2004) Identification of an iron-binding protein of the Dps family expressed by Streptococcus thermophilus. Curr. Microbiol. 48, 51-56.
-
(2004)
Curr. Microbiol.
, vol.48
, pp. 51-56
-
-
Nicodème, M.1
Perrin, C.2
Hols, P.3
Bracquart, P.4
Gaillard, J.L.5
-
26
-
-
0036197721
-
The neutrophil-activating protein of Helicobacter pylori
-
Dundon, W., Nishioka, H., Polenghi, A., Papinutto, E., Zanotti, G., Montemurro, P., Del, G., Rappuoli, R., and Montecucco, C. (2002) The neutrophil-activating protein of Helicobacter pylori. Int. J. Med. Microbiol. 291, 545-550.
-
(2002)
Int. J. Med. Microbiol.
, vol.291
, pp. 545-550
-
-
Dundon, W.1
Nishioka, H.2
Polenghi, A.3
Papinutto, E.4
Zanotti, G.5
Montemurro, P.6
Del, G.7
Rappuoli, R.8
Montecucco, C.9
-
27
-
-
33644859833
-
Emergence of biofilm-forming subpopulations upon exposure of Escherichia coli to environmental bacteriophages
-
Lacqua, A., Wanner, O., Colangelo, T., Martinotti, M. G., and Landini, P. (2006) Emergence of biofilm-forming subpopulations upon exposure of Escherichia coli to environmental bacteriophages. Appl. Environ. Microbiol. 72, 956-959.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 956-959
-
-
Lacqua, A.1
Wanner, O.2
Colangelo, T.3
Martinotti, M.G.4
Landini, P.5
-
28
-
-
33846217722
-
The Lyme disease agent Borrelia burgdorferi requires BB0690, a Dps homologue, to persist within ticks
-
Li, X., Pal, U., Ramamoorthi, N., Liu, X., Desrosiers, D. C., Eggers, C. H., Anderson, J. F., Radolf, J. D., and Fikrig, E. (2007) The Lyme disease agent Borrelia burgdorferi requires BB0690, a Dps homologue, to persist within ticks. Mol. Microbiol. 63, 694-710.
-
(2007)
Mol. Microbiol.
, vol.63
, pp. 694-710
-
-
Li, X.1
Pal, U.2
Ramamoorthi, N.3
Liu, X.4
Desrosiers, D.C.5
Eggers, C.H.6
Anderson, J.F.7
Radolf, J.D.8
Fikrig, E.9
-
29
-
-
34247512597
-
Evidence for glycosylation on a DNA-binding protein of Salmonella enterica
-
Hanna, E. S., Roque-Barreira, M. C., Bernardes, E. S., Panunto-Castelo, A., Sousa, M. V., Almeida, I. C., and Brocchi, M. (2007) Evidence for glycosylation on a DNA-binding protein of Salmonella enterica. Microb. Cell. Fact. 6, 11.
-
(2007)
Microb. Cell. Fact.
, vol.6
, pp. 11
-
-
Hanna, E.S.1
Roque-Barreira, M.C.2
Bernardes, E.S.3
Panunto-Castelo, A.4
Sousa, M.V.5
Almeida, I.C.6
Brocchi, M.7
-
30
-
-
0034780485
-
Nonreplicating persistence of Mycobacterium tuberculosis
-
Wayne, L. and Sohaskey, C. (2001) Nonreplicating persistence of Mycobacterium tuberculosis. Annu. Rev. Microbiol. 55, 139-163.
-
(2001)
Annu. Rev. Microbiol.
, vol.55
, pp. 139-163
-
-
Wayne, L.1
Sohaskey, C.2
-
31
-
-
0016159839
-
Studies on the effect of starvation on mycobacteria
-
Nyka, W. (1974) Studies on the effect of starvation on mycobacteria. Infect. Immun. 9, 843-850.
-
(1974)
Infect. Immun.
, vol.9
, pp. 843-850
-
-
Nyka, W.1
-
32
-
-
23744485146
-
The crystal structures of Lactococcus lactis MG1363 Dps proteins reveal the presence of an N-terminal helix that is required for DNA binding
-
Stillman, T. J., Upadhyay, M., Norte, V. A., Sedelnikova, S. E., Carradus, M., Tzokov, S., Bullough, P. A., Shearman, C. A., Gasson, M. J., Williams, C. H., Artymiuk, P. J., and Green, J. (2005) The crystal structures of Lactococcus lactis MG1363 Dps proteins reveal the presence of an N-terminal helix that is required for DNA binding. Mol. Microbiol. 57, 1101-1112.
-
(2005)
Mol. Microbiol.
, vol.57
, pp. 1101-1112
-
-
Stillman, T.J.1
Upadhyay, M.2
Norte, V.A.3
Sedelnikova, S.E.4
Carradus, M.5
Tzokov, S.6
Bullough, P.A.7
Shearman, C.A.8
Gasson, M.J.9
Williams, C.H.10
Artymiuk, P.J.11
Green, J.12
-
33
-
-
33745909152
-
Crystal structure of Dps-1, a functionally distinct Dps protein from Deinococcus radiodurans
-
Kim, S. G., Bhattacharyya, G., Grove, A., and Lee, Y. H. (2006) Crystal structure of Dps-1, a functionally distinct Dps protein from Deinococcus radiodurans. J. Mol. Biol. 361, 105-114.
-
(2006)
J. Mol. Biol.
, vol.361
, pp. 105-114
-
-
Kim, S.G.1
Bhattacharyya, G.2
Grove, A.3
Lee, Y.H.4
-
34
-
-
34447622836
-
The crystal structure of the Dps2 from Deinococcus radiodurans reveals an unusual pore profile with a non-specific metal binding site
-
Cuypers, M. G., Mitchell, E. P., Romão, C. V., and Mcsweeney, S. M. (2007) The crystal structure of the Dps2 from Deinococcus radiodurans reveals an unusual pore profile with a non-specific metal binding site. J. Mol. Biol. 371, 787-799.
-
(2007)
J. Mol. Biol.
, vol.371
, pp. 787-799
-
-
Cuypers, M.G.1
Mitchell, E.P.2
Romão, C.V.3
Mcsweeney, S.M.4
-
35
-
-
0030665283
-
Expression of a stress- and starvation-induced dps/pexB-homologous gene is controlled by the alternative sigma factor sigma(B) in Bacillus subtilis
-
Antelmann, H., Engelmann, S., Schmid, R., Sorokin, A., Lapidus, A., and Hecker, M. (1997) Expression of a stress- and starvation-induced dps/pexB-homologous gene is controlled by the alternative Sigma Factor sigmaB in Bacillus subtilis. J. Bacteriol. 179, 7251-7256. (Pubitemid 27509960)
-
(1997)
Journal of Bacteriology
, vol.179
, Issue.23
, pp. 7251-7256
-
-
Antelmann, H.1
Engelmann, S.2
Schmid, R.3
Sorokin, A.4
Lapidus, A.5
Hecker, M.6
-
36
-
-
0037177883
-
Structure of two iron-binding proteins from Bacillus anthracis
-
Papinutto, E., Dundon, W. G., Pitulis, N., Battistutta, R., Montecucco, C., and Zanotti, G. (2002) Structure of two iron-binding proteins from Bacillus anthracis. J. Biol. Chem. 277, 15093-15098.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 15093-15098
-
-
Papinutto, E.1
Dundon, W.G.2
Pitulis, N.3
Battistutta, R.4
Montecucco, C.5
Zanotti, G.6
-
37
-
-
3042582299
-
X-ray analysis of Mycobacterium smegmatis Dps and a comparative study involving other Dps and Dps-like molecules
-
Roy, S., Gupta, S., Das, S., Sekar, K., Chatterji, D., and Vijayan, M. (2004) X-ray analysis of Mycobacterium smegmatis Dps and a comparative study involving other Dps and Dps-like molecules. J. Mol. Biol. 339, 1103-1113.
-
(2004)
J. Mol. Biol.
, vol.339
, pp. 1103-1113
-
-
Roy, S.1
Gupta, S.2
Das, S.3
Sekar, K.4
Chatterji, D.5
Vijayan, M.6
-
38
-
-
37349040333
-
Structural studies on the second Mycobacterium smegmatis Dps: Invariant and variable features of structure, assembly and function
-
Roy, S., Saraswathi, R., Chatterji, D., and Vijayan, M. (2008) Structural studies on the second Mycobacterium smegmatis Dps: invariant and variable features of structure, assembly and function. J. Mol. Biol. 375, 948-959.
-
(2008)
J. Mol. Biol.
, vol.375
, pp. 948-959
-
-
Roy, S.1
Saraswathi, R.2
Chatterji, D.3
Vijayan, M.4
-
39
-
-
33748878031
-
Paired Bacillus anthracis Dps (mini-ferritin) have different reactivities with peroxide
-
Liu, X., Kim, K., Leighton, T., and Theil, E. C. (2006) Paired Bacillus anthracis Dps (mini-ferritin) have different reactivities with peroxide. J. Biol. Chem. 281, 27827-27835.
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 27827-27835
-
-
Liu, X.1
Kim, K.2
Leighton, T.3
Theil, E.C.4
-
40
-
-
34249941286
-
Role of N and C-terminal tails in DNA binding and assembly in Dps: Structural studies of Mycobacterium smegmatis Dps deletion mutants
-
Roy, S., Saraswathi, R., Gupta, S., Sekar, K., Chatterji, D., and Vijayan, M. (2007) Role of N and C-terminal tails in DNA binding and assembly in Dps: structural studies of Mycobacterium smegmatis Dps deletion mutants. J. Mol. Biol. 370, 752-767,
-
(2007)
J. Mol. Biol.
, vol.370
, pp. 752-767
-
-
Roy, S.1
Saraswathi, R.2
Gupta, S.3
Sekar, K.4
Chatterji, D.5
Vijayan, M.6
-
41
-
-
0028181132
-
Characterization of the sigma38-dependent expression of a core Escherichia coli starvation gene, pexB
-
Lomovskaya, O. L., Kidwell, J. P., and Matin, A. (1994) Characterization of the sigma 38-dependent expression of a core Escherichia coli starvation gene, pexB. J. Bacteriol. 176, 3928-3935, (Pubitemid 2106801)
-
(1994)
Journal of Bacteriology
, vol.176
, Issue.13
, pp. 3928-3935
-
-
Lomovskaya, O.L.1
Kidwell, J.P.2
Matin, A.3
-
42
-
-
44249126516
-
Selective repression by Fis and H-NS at the Escherichia colidps promoter
-
Grainger, D. C., Goldberg, M. D., Lee, D. J., and Busby, S. J. W. (2008) Selective repression by Fis and H-NS at the Escherichia colidps promoter. Mol. Microbiol. 68, 1366-1377,
-
(2008)
Mol. Microbiol.
, vol.68
, pp. 1366-1377
-
-
Grainger, D.C.1
Goldberg, M.D.2
Lee, D.J.3
Busby, S.J.W.4
-
43
-
-
44249112381
-
Fine-tuned growth phase control of dps, encoding a DNA protection protein, by FIS and H-NS
-
Schnetz, K. (2008) Fine-tuned growth phase control of dps, encoding a DNA protection protein, by FIS and H-NS. Mol. Microbiol. 68, 1345-1347,
-
(2008)
Mol. Microbiol.
, vol.68
, pp. 1345-1347
-
-
Schnetz, K.1
-
44
-
-
0141566368
-
Dynamic control of Dps protein levels by ClpXP and ClpAP proteases in Escherichia coli
-
Stephani, K., Weichart, D., and Hengge, R. (2003) Dynamic control of Dps protein levels by ClpXP and ClpAP proteases in Escherichia coli. Mol. Microbiol. 49, 1605-1614,
-
(2003)
Mol. Microbiol.
, vol.49
, pp. 1605-1614
-
-
Stephani, K.1
Weichart, D.2
Hengge, R.3
-
45
-
-
0036019356
-
Proteomics analysis of carbon-starved Mycobacterium smegmatis: Induction of Dps-like protein
-
Gupta, S., Pandit, S. B., Srinivasan, N., and Chatterji, D. (2002) Proteomics analysis of carbon-starved Mycobacterium smegmatis: induction of Dps-like protein. Protein. Eng. 15, 503-512,
-
(2002)
Protein. Eng.
, vol.15
, pp. 503-512
-
-
Gupta, S.1
Pandit, S.B.2
Srinivasan, N.3
Chatterji, D.4
-
46
-
-
0005443595
-
Reconstitution of bacterial DNA-dependent RNA-polymerase from isolated subunits as a tool for the elucidation of the role of the subunits in transcription
-
Heil, A. and Zillig, W. (1970) Reconstitution of bacterial DNA-dependent RNA-polymerase from isolated subunits as a tool for the elucidation of the role of the subunits in transcription. FEBS Lett. 11, 165-168.
-
(1970)
FEBS Lett.
, vol.11
, pp. 165-168
-
-
Heil, A.1
Zillig, W.2
-
47
-
-
0015506575
-
Subunits of RNA polymerase in function and structure. II. Reconstitution of Escherichia coli RNA polymerase from isolated subunits
-
Ishihama, A. and Ito, K. (1972) Subunits of RNA polymerase in function and structure. II. Reconstitution of Escherichia coli RNA polymerase from isolated subunits. J. Mol. Biol. 72, 111-123.
-
(1972)
J. Mol. Biol.
, vol.72
, pp. 111-123
-
-
Ishihama, A.1
Ito, K.2
-
48
-
-
0029797365
-
Reconstitution of RNA polymerase
-
Fujita, N. and Ishihama, A. (1996) Reconstitution of RNA polymerase. Meth. Enzymol. 273, 121-130,
-
(1996)
Meth. Enzymol.
, vol.273
, pp. 121-130
-
-
Fujita, N.1
Ishihama, A.2
-
49
-
-
33645532080
-
Posttranslational regulation of Mycobacterium tuberculosis extracytoplasmic-function sigma factor sigma L and roles in virulence and in global regulation of gene expression
-
Dainese, E., Rodrigue, S., Delogu, G., Provvedi, R., Laflamme, L., Brzezinski, R., Fadda, G., Smith, I., Gaudreau, L., Palù, G., and Manganelli, R. (2006) Posttranslational regulation of Mycobacterium tuberculosis extracytoplasmic-function sigma factor sigma L and roles in virulence and in global regulation of gene expression. Infect. Immun. 74, 2457-2461,
-
(2006)
Infect. Immun.
, vol.74
, pp. 2457-2461
-
-
Dainese, E.1
Rodrigue, S.2
Delogu, G.3
Provvedi, R.4
Laflamme, L.5
Brzezinski, R.6
Fadda, G.7
Smith, I.8
Gaudreau, L.9
Palù, G.10
Manganelli, R.11
-
50
-
-
38849201790
-
Cascade of extracytoplasmic function sigma factors in Mycobacterium tuberculosis: Identification of a sigmaJ-dependent promoter upstream of sigI FEMS
-
Homerova, D., Halgasova, L., and Kormanec, J. (2008) Cascade of extracytoplasmic function sigma factors in Mycobacterium tuberculosis: identification of a sigmaJ-dependent promoter upstream of sigI FEMS. Microbiol. Lett. 280, 120-126,
-
(2008)
Microbiol. Lett.
, vol.280
, pp. 120-126
-
-
Homerova, D.1
Halgasova, L.2
Kormanec, J.3
-
51
-
-
0038291700
-
The multi-layered structure of Dps with a novel di-nuclear ferroxidase center
-
Ren, B., Tibbelin, G., Kajino, T., Asami, O., and Ladenstein, R. (2003) The multi-layered structure of Dps with a novel di-nuclear ferroxidase center. J. Mol. Biol. 329, 467-477.
-
(2003)
J. Mol. Biol.
, vol.329
, pp. 467-477
-
-
Ren, B.1
Tibbelin, G.2
Kajino, T.3
Asami, O.4
Ladenstein, R.5
-
52
-
-
0033986734
-
The dodecameric ferritin from Listeria innocua contains a novel intersubunit iron-binding site
-
Ilari, A., Stefanini, S., Chiancone, E., and Tsernoglou, D. (2000) The dodecameric ferritin from Listeria innocua contains a novel intersubunit iron-binding site. Nat. Struct. Biol. 7, 38-43.
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 38-43
-
-
Ilari, A.1
Stefanini, S.2
Chiancone, E.3
Tsernoglou, D.4
-
53
-
-
0037008743
-
Iron and hydrogen peroxide detoxification properties of DNA-binding protein from starved cells. A ferritinlike DNA-binding protein of Escherichia coli
-
Zhao, G., Ceci, P., Ilari, A., Giangiacomo, L., Laue, T. M., Chiancone, E., and Chasteen, N. D. (2002) Iron and hydrogen peroxide detoxification properties of DNA-binding protein from starved cells. A ferritinlike DNA-binding protein of Escherichia coli. J. Biol. Chem. 277, 27689-27696.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 27689-27696
-
-
Zhao, G.1
Ceci, P.2
Ilari, A.3
Giangiacomo, L.4
Laue, T.M.5
Chiancone, E.6
Chasteen, N.D.7
-
54
-
-
10244243805
-
DNA condensation and self-aggregation of Escherichia coli Dps are coupled phenomena related to the properties of the N-terminus
-
Ceci, P., Cellai, S., Falvo, E., Rivetti, C., Rossi, G. L., and Chiancone, E. (2004) DNA condensation and self-aggregation of Escherichia coli Dps are coupled phenomena related to the properties of the N-terminus. Nucl. Acids. Res. 32, 5935-5944.
-
(2004)
Nucl. Acids. Res.
, vol.32
, pp. 5935-5944
-
-
Ceci, P.1
Cellai, S.2
Falvo, E.3
Rivetti, C.4
Rossi, G.L.5
Chiancone, E.6
-
55
-
-
34249725630
-
The N-terminal extensions of Deinococcus radiodurans Dps-1 mediate DNA major groove interactions as well as assembly of the dodecamer
-
Bhattacharyya, G. and Grove, A. (2007) The N-terminal extensions of Deinococcus radiodurans Dps-1 mediate DNA major groove interactions as well as assembly of the dodecamer. J. Biol. Chem. 282, 11921-11930.
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 11921-11930
-
-
Bhattacharyya, G.1
Grove, A.2
-
56
-
-
33748372577
-
The crystal structure of Deinococcus radiodurans Dps protein (DR2263) reveals the presence of a novel metal centre in the N terminus
-
Romão, C., Mitchell, E., and Mcsweeney, S. (2006) The crystal structure of Deinococcus radiodurans Dps protein (DR2263) reveals the presence of a novel metal centre in the N terminus. J. Biol. Inorg. Chem. 11, 891-902.
-
(2006)
J. Biol. Inorg. Chem.
, vol.11
, pp. 891-902
-
-
Romão, C.1
Mitchell, E.2
Mcsweeney, S.3
-
57
-
-
34247590894
-
Estimation of Förster's distance between two ends of Dps protein from mycobacteria: Distance heterogeneity as a function of oligomerization and DNA binding
-
Chowdhury, R. P. and Chatterji, D. (2007) Estimation of Förster's distance between two ends of Dps protein from mycobacteria: distance heterogeneity as a function of oligomerization and DNA binding. Biophys. Chem. 128, 19-29.
-
(2007)
Biophys. Chem.
, vol.128
, pp. 19-29
-
-
Chowdhury, R.P.1
Chatterji, D.2
-
58
-
-
38149037823
-
Designed protein-protein Association
-
Grueninger, D., Treiber, N., Ziegler, M. O., Koetter, J. W., Schulze, M. S., and Schulz, G. E. (2008) Designed protein-protein Association. Science 319, 206-209.
-
(2008)
Science
, vol.319
, pp. 206-209
-
-
Grueninger, D.1
Treiber, N.2
Ziegler, M.O.3
Koetter, J.W.4
Schulze, M.S.5
Schulz, G.E.6
-
59
-
-
33847067891
-
Asn disrupt an intersubunit salt bridge and convert Listeria innocua Dps into its natural mutant Listeria monocytogenes Dps Effects on Protein Stability at Low pH
-
Bellapadrona, G., Chiaraluce, R., Consalvi, V., Ilari, A., Stefanini, S., and Chiancone, E. (2007) Asn disrupt an intersubunit salt bridge and convert Listeria innocua Dps into its natural mutant Listeria monocytogenes Dps Effects on Protein Stability at Low pH. Proteins 66, 975-983.
-
(2007)
Proteins
, vol.66
, pp. 975-983
-
-
Bellapadrona, G.1
Chiaraluce, R.2
Consalvi, V.3
Ilari, A.4
Stefanini, S.5
Chiancone, E.6
-
60
-
-
34447503697
-
Conformational entropy in molecular recognition by proteins
-
Frederick, K. K., Marlow, M. S., Valentine, K. G., and Wand, A. J. (2007) Conformational entropy in molecular recognition by proteins. Nature 448, 325-329.
-
(2007)
Nature
, vol.448
, pp. 325-329
-
-
Frederick, K.K.1
Marlow, M.S.2
Valentine, K.G.3
Wand, A.J.4
-
61
-
-
0036893020
-
Side-chain conformational entropy at protein-protein interfaces
-
DOI 10.1110/ps.0222702
-
Cole, C. and Warwicker, J. (2002) Side-chain conformational entropy at protein-protein interfaces. Protein Sci. 11, 2860-2870. (Pubitemid 35365252)
-
(2002)
Protein Science
, vol.11
, Issue.12
, pp. 2860-2870
-
-
Cole, C.1
Warwicker, J.2
-
62
-
-
54449101143
-
Molecular mechanism of in vitro oligomerization of Dps from Mycobacterium smegmatis: Mutations of the residues identified by "interface cluster" analysis
-
Chowdhury, R., Vijayabaskar, M., Vishveshwara, S., and Chatterji, D. (2008) Molecular mechanism of in vitro oligomerization of Dps from Mycobacterium smegmatis: mutations of the residues identified by "interface cluster" analysis. Biochemistry 47, 11110-11117.
-
(2008)
Biochemistry
, vol.47
, pp. 11110-11117
-
-
Chowdhury, R.1
Vijayabaskar, M.2
Vishveshwara, S.3
Chatterji, D.4
-
63
-
-
77949422340
-
Protein cages, rings and tubes: Useful components of future nanodevices?
-
Heddle, J. G. (2008) Protein cages, rings and tubes: useful components of future nanodevices? Nanotechnol. Sci. Appl. 1, 67-78.
-
(2008)
Nanotechnol. Sci. Appl.
, vol.1
, pp. 67-78
-
-
Heddle, J.G.1
|