메뉴 건너뛰기




Volumn 187, Issue 19, 2005, Pages 6691-6700

Global analysis of proteins synthesized by Mycobacterium smegmatis provides direct evidence for physiological heterogeneity in stationary-phase cultures

Author keywords

[No Author keywords available]

Indexed keywords

CARBON; DNA BINDING PROTEIN; ELONGATION FACTOR TU; FLAVOPROTEIN; GREEN FLUORESCENT PROTEIN; HEAT SHOCK PROTEIN; PROTEIN DNAK; PROTEIN FIXA; SINGLE STRANDED DNA; SUCCINYL COENZYME A SYNTHETASE; UNCLASSIFIED DRUG;

EID: 25144510071     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.187.19.6691-6700.2005     Document Type: Article
Times cited : (19)

References (39)
  • 1
    • 0036174975 scopus 로고    scopus 로고
    • rRNA promoter activity in the fast-growing bacterium Vibrio natriegens
    • Aiyar, S. E., T. Gaal, and R. L. Course. 2002. rRNA promoter activity in the fast-growing bacterium Vibrio natriegens. J. Bacteriol. 184:1349-1358.
    • (2002) J. Bacteriol. , vol.184 , pp. 1349-1358
    • Aiyar, S.E.1    Gaal, T.2    Course, R.L.3
  • 2
    • 0036270739 scopus 로고    scopus 로고
    • Evaluation of a nutrient starvation model of Mycobacterium tuberculosis persistence by gene and protein expression profiling
    • Betts, J. C., P. T. Lukey, L. C. Robb, R. A. McAdam, and K. Duncan. 2002. Evaluation of a nutrient starvation model of Mycobacterium tuberculosis persistence by gene and protein expression profiling. Mol. Microbiol. 43: 717-731.
    • (2002) Mol. Microbiol. , vol.43 , pp. 717-731
    • Betts, J.C.1    Lukey, P.T.2    Robb, L.C.3    McAdam, R.A.4    Duncan, K.5
  • 3
    • 3543006508 scopus 로고    scopus 로고
    • Growth rate regulation of rRNA content of a marine Synechococcus (Cyanobacterium) strain
    • Binder, B. J., and Y. C. Liu. 1998. Growth rate regulation of rRNA content of a marine Synechococcus (Cyanobacterium) strain. Appl. Environ. Microbiol. 64:3346-3351.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 3346-3351
    • Binder, B.J.1    Liu, Y.C.2
  • 4
    • 0038054074 scopus 로고    scopus 로고
    • Development and application of unstable GFP variants to kinetic studies of mycobacterial gene expression
    • Blokpoel, M. C., R. O'Toole, M. J. Smeulders, and H. D. Williams. 2003. Development and application of unstable GFP variants to kinetic studies of mycobacterial gene expression. J. Microbiol. Methods 54:203-211.
    • (2003) J. Microbiol. Methods , vol.54 , pp. 203-211
    • Blokpoel, M.C.1    O'Toole, R.2    Smeulders, M.J.3    Williams, H.D.4
  • 5
    • 0036951936 scopus 로고    scopus 로고
    • Mycobacterium bovis BCG response regulator essential for hypoxic dormancy
    • Boon, C., and T. Dick. 2002. Mycobacterium bovis BCG response regulator essential for hypoxic dormancy. J. Bacteriol. 184:6760-6767.
    • (2002) J. Bacteriol. , vol.184 , pp. 6760-6767
    • Boon, C.1    Dick, T.2
  • 7
    • 0023123797 scopus 로고
    • Bacillus subtilis rRNA promoters are growth rate regulated in Escherichia coli
    • Deneer, H. G., and G. B. Spiegelman. 1987. Bacillus subtilis rRNA promoters are growth rate regulated in Escherichia coli. J. Bacteriol. 169:995-1002.
    • (1987) J. Bacteriol. , vol.169 , pp. 995-1002
    • Deneer, H.G.1    Spiegelman, G.B.2
  • 8
    • 0033616769 scopus 로고    scopus 로고
    • Evolution of microbial diversity during prolonged starvation
    • Finkel, S. E., and R. Kolter. 1999. Evolution of microbial diversity during prolonged starvation. Proc. Natl. Acad. Sci. USA 96:4023-4027.
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 4023-4027
    • Finkel, S.E.1    Kolter, R.2
  • 9
    • 0020971322 scopus 로고
    • Quantitative two-dimensional gel electrophoresis of proteins
    • Garreis, J. I. 1983. Quantitative two-dimensional gel electrophoresis of proteins. Methods Enzymol. 100:411-423.
    • (1983) Methods Enzymol. , vol.100 , pp. 411-423
    • Garreis, J.I.1
  • 10
    • 0024978195 scopus 로고
    • The QUEST system for quantitative analysis of two-dimensional gels
    • Garreis, J. I. 1989. The QUEST system for quantitative analysis of two-dimensional gels. J. Biol. Chem. 264:5269-5282.
    • (1989) J. Biol. Chem. , vol.264 , pp. 5269-5282
    • Garreis, J.I.1
  • 11
    • 0036019356 scopus 로고    scopus 로고
    • Proteomics analysis of carbon-starved Mycobacterium smegmatis: Induction of Dps-like protein
    • Gupta, S., S. B. Pandit, N. Srinivasan, and D. Chatterji. 2002. Proteomics analysis of carbon-starved Mycobacterium smegmatis: induction of Dps-like protein. Protein Eng. 15:503-512.
    • (2002) Protein Eng. , vol.15 , pp. 503-512
    • Gupta, S.1    Pandit, S.B.2    Srinivasan, N.3    Chatterji, D.4
  • 12
    • 0029992278 scopus 로고    scopus 로고
    • Molecular chaperones in cellular protein folding
    • Hartl, F. U. 1996. Molecular chaperones in cellular protein folding. Nature 381:571-580.
    • (1996) Nature , vol.381 , pp. 571-580
    • Hartl, F.U.1
  • 13
    • 0037040541 scopus 로고    scopus 로고
    • Molecular chaperones in the cytosol: From nascent chain to folded protein
    • Hartl, F. U., and M. Hayer-Hartl. 2002. Molecular chaperones in the cytosol: from nascent chain to folded protein. Science 295:1852-1858.
    • (2002) Science , vol.295 , pp. 1852-1858
    • Hartl, F.U.1    Hayer-Hartl, M.2
  • 14
    • 0026551420 scopus 로고
    • Aerobic vinyl chloride metabolism in Mycobacterium aurum L1
    • Hartmans, S., and J. A. M. Debont. 1992. Aerobic vinyl chloride metabolism in Mycobacterium aurum L1. Appl. Environ. Microbiol. 58:1220-1226.
    • (1992) Appl. Environ. Microbiol. , vol.58 , pp. 1220-1226
    • Hartmans, S.1    Debont, J.A.M.2
  • 15
    • 0018902646 scopus 로고
    • The early bactericidal activity of drugs in patients with pulmonary tuberculosis
    • Jindani, A., V. R. Aber, E. A. Edwards, and D. A. Mitchison. 1980. The early bactericidal activity of drugs in patients with pulmonary tuberculosis. Am. Rev. Respir. Dis. 121:939-949.
    • (1980) Am. Rev. Respir. Dis. , vol.121 , pp. 939-949
    • Jindani, A.1    Aber, V.R.2    Edwards, E.A.3    Mitchison, D.A.4
  • 16
    • 0033832464 scopus 로고    scopus 로고
    • Mutants of Mycobacterium smegmatis impaired in stationary-phase survival
    • Keer, J., M. J. Smeulders, K. M. Gray, and H. D. Williams. 2000. Mutants of Mycobacterium smegmatis impaired in stationary-phase survival. Microbiology 146:2209-2217.
    • (2000) Microbiology , vol.146 , pp. 2209-2217
    • Keer, J.1    Smeulders, M.J.2    Gray, K.M.3    Williams, H.D.4
  • 17
    • 0035135556 scopus 로고    scopus 로고
    • A purF mutant of Mycobacterium smegmatis has impaired survival during oxygen-starved stationary phase
    • Keer, J., M. J. Smeulders, and H. D. Williams. 2001. A purF mutant of Mycobacterium smegmatis has impaired survival during oxygen-starved stationary phase. Microbiology 147:473-481.
    • (2001) Microbiology , vol.147 , pp. 473-481
    • Keer, J.1    Smeulders, M.J.2    Williams, H.D.3
  • 18
    • 0027997210 scopus 로고
    • Cloning and sequence analysis of the rpsL and rpsG genes of Mycobacterium smegmatis and characterization of mutations causing resistance to streptomycin
    • Kenney, T. J., and G. Churchward. 1994. Cloning and sequence analysis of the rpsL and rpsG genes of Mycobacterium smegmatis and characterization of mutations causing resistance to streptomycin. J. Bacteriol. 176:6153-6156.
    • (1994) J. Bacteriol. , vol.176 , pp. 6153-6156
    • Kenney, T.J.1    Churchward, G.2
  • 19
    • 0029936383 scopus 로고    scopus 로고
    • Genetic analysis of the Mycobacterium smegmatis rpsL promoter
    • Kenney, T. J., and G. Churchward. 1996. Genetic analysis of the Mycobacterium smegmatis rpsL promoter. J. Bacteriol. 178:3564-3571.
    • (1996) J. Bacteriol. , vol.178 , pp. 3564-3571
    • Kenney, T.J.1    Churchward, G.2
  • 21
    • 0028246888 scopus 로고
    • Escherichia coli single-stranded DNA-binding protein: Multiple DNA-binding modes and cooperativities
    • Lohman, T. M., and M. E. Ferrari. 1994. Escherichia coli single-stranded DNA-binding protein: multiple DNA-binding modes and cooperativities. Annu. Rev. Biochem. 63:527-570.
    • (1994) Annu. Rev. Biochem. , vol.63 , pp. 527-570
    • Lohman, T.M.1    Ferrari, M.E.2
  • 22
    • 0013888783 scopus 로고
    • Microbial persistence. I. The capacity of tubercle bacilli to survive sterilization in mouse tissues
    • McCune, R. M., F. M. Feldmann, H. P. Lambert, and W. McDermott. 1966. Microbial persistence. I. The capacity of tubercle bacilli to survive sterilization in mouse tissues. J. Exp. Med. 123:445-468.
    • (1966) J. Exp. Med. , vol.123 , pp. 445-468
    • McCune, R.M.1    Feldmann, F.M.2    Lambert, H.P.3    McDermott, W.4
  • 23
    • 0034528573 scopus 로고    scopus 로고
    • In vivo veritias: The search for TB drug targets goes live
    • McKinney, J. D. 2000. In vivo veritias: the search for TB drug targets goes live. Nat. Med. 6:1330-1333.
    • (2000) Nat. Med. , vol.6 , pp. 1330-1333
    • McKinney, J.D.1
  • 24
    • 0018587843 scopus 로고
    • Basic mechanisms of chemotherapy
    • Mitchison, D. A. 1979. Basic mechanisms of chemotherapy. Chest 76(Suppl.):771.
    • (1979) Chest , vol.76 , Issue.SUPPL. , pp. 771
    • Mitchison, D.A.1
  • 25
    • 0016159839 scopus 로고
    • Studies on the effect of starvation on mycobacteria
    • Nyka, W. 1974. Studies on the effect of starvation on mycobacteria. Infect. Immun. 9:843-850.
    • (1974) Infect. Immun. , vol.9 , pp. 843-850
    • Nyka, W.1
  • 26
    • 0037373063 scopus 로고    scopus 로고
    • A two-component regulator of universal stress protein expression and adaptation to oxygen starvation in Mycobacterium smegmatis
    • O'Toole, R., M. J. Smeulders, M. C. Blokpoel, E. J. Kay, K. Lougbeed, and H. D. Williams. 2003. A two-component regulator of universal stress protein expression and adaptation to oxygen starvation in Mycobacterium smegmatis. J. Bacteriol. 185:1543-1554.
    • (2003) J. Bacteriol. , vol.185 , pp. 1543-1554
    • O'Toole, R.1    Smeulders, M.J.2    Blokpoel, M.C.3    Kay, E.J.4    Lougbeed, K.5    Williams, H.D.6
  • 27
    • 0033872759 scopus 로고    scopus 로고
    • The stringent response of Mycobacterium tuberculosis is required for long-term survival
    • Primm, T. P., S. J. Andersen, V. Mizrabi, D. Avarbock, H. Rubin, and C. E. 3. Barry. 2000. The stringent response of Mycobacterium tuberculosis is required for long-term survival. J. Bacteriol. 182:4889-4898.
    • (2000) J. Bacteriol. , vol.182 , pp. 4889-4898
    • Primm, T.P.1    Andersen, S.J.2    Mizrabi, V.3    Avarbock, D.4    Rubin, H.5    Barry, C.E.6
  • 28
    • 3142760181 scopus 로고    scopus 로고
    • Formation of non-culturable cells of Mycobacterium smegmatis in stationary phase in response to growth under suboptimal conditions and their Rpf-mediated resuscitation
    • Shleeva, M., G. V. Mukamolova, M. Young, H. D. Williams, and A. S. Kaprelyants. 2004. Formation of non-culturable cells of Mycobacterium smegmatis in stationary phase in response to growth under suboptimal conditions and their Rpf-mediated resuscitation. Microbiology 150:1687-1697.
    • (2004) Microbiology , vol.150 , pp. 1687-1697
    • Shleeva, M.1    Mukamolova, G.V.2    Young, M.3    Williams, H.D.4    Kaprelyants, A.S.5
  • 29
    • 0036264204 scopus 로고    scopus 로고
    • Formation and resuscitation of "non-culturable" cells of Rhodococcus rhodochrous and Mycobacterium tuberculosis in prolonged stationary phase
    • Shleeva, M. O., K. Bagramyan, M. V. Telkov, G. V. Mukamolova, M. Young, D. B. Kell, and A. S. Kaprelyants. 2002. Formation and resuscitation of "non-culturable" cells of Rhodococcus rhodochrous and Mycobacterium tuberculosis in prolonged stationary phase. Microbiology 148:1581-1591.
    • (2002) Microbiology , vol.148 , pp. 1581-1591
    • Shleeva, M.O.1    Bagramyan, K.2    Telkov, M.V.3    Mukamolova, G.V.4    Young, M.5    Kell, D.B.6    Kaprelyants, A.S.7
  • 30
    • 0032924333 scopus 로고    scopus 로고
    • Adaptation of Mycobacterium smegmatis to stationary phase
    • Smeulders, M. J., J. Keer, R. A. Speight, and H. D. Williams. 1999. Adaptation of Mycobacterium smegmatis to stationary phase. J. Bacteriol. 181:270-283.
    • (1999) J. Bacteriol. , vol.181 , pp. 270-283
    • Smeulders, M.J.1    Keer, J.2    Speight, R.A.3    Williams, H.D.4
  • 31
    • 0025081151 scopus 로고
    • Isolation and characterization of efficient plasmid transformation mutants of Mycobacterium smegmatis
    • Snapper, S. B., R. E. Melton, S. Mustafa, T. Kieser, and W. R. Jacobs, Jr. 1990. Isolation and characterization of efficient plasmid transformation mutants of Mycobacterium smegmatis. Mol. Microbiol. 4:1911-1919.
    • (1990) Mol. Microbiol. , vol.4 , pp. 1911-1919
    • Snapper, S.B.1    Melton, R.E.2    Mustafa, S.3    Kieser, T.4    Jacobs Jr., W.R.5
  • 32
    • 0025126413 scopus 로고
    • Internal sequence analysis of proteins separated on polyacrylamide gels at the submicrogram level: Improved methods, applications and gene cloning strategies
    • Tempst, P., A. J. Link, L. R. Riviere, M. Fleming, and C. Elicone. 1990. Internal sequence analysis of proteins separated on polyacrylamide gels at the submicrogram level: improved methods, applications and gene cloning strategies. Electrophoresis 11:537-553.
    • (1990) Electrophoresis , vol.11 , pp. 537-553
    • Tempst, P.1    Link, A.J.2    Riviere, L.R.3    Fleming, M.4    Elicone, C.5
  • 33
    • 0024060927 scopus 로고
    • Control of the tRNA-tufB operon in Escherichia coli. 1. rRNA gene dosage effects and growth-rate-dependent regulation
    • Van Delft, J. H., H. M. Verbeek, P. J. De Jong, D. S. Schmidt, A. Talens, and L. Bosch. 1988. Control of the tRNA-tufB operon in Escherichia coli. 1. rRNA gene dosage effects and growth-rate-dependent regulation. Eur. J. Biochem. 175:355-362.
    • (1988) Eur. J. Biochem. , vol.175 , pp. 355-362
    • Van Delft, J.H.1    Verbeek, H.M.2    De Jong, P.J.3    Schmidt, D.S.4    Talens, A.5    Bosch, L.6
  • 34
    • 0027986926 scopus 로고
    • Functional analysis of transcription of the Mycobacterium tuberculosis 16S rDNA-encoding gene
    • Verma, A., A. K. Kinger, and J. S. Tyagi. 1992. Functional analysis of transcription of the Mycobacterium tuberculosis 16S rDNA-encoding gene. Gene 148:113-118.
    • (1992) Gene , vol.148 , pp. 113-118
    • Verma, A.1    Kinger, A.K.2    Tyagi, J.S.3
  • 35
    • 0032780147 scopus 로고    scopus 로고
    • Mycobacterium tuberculosis rrn promoters: Differential usage and growth rate-dependent control
    • Verma, A., A. K. Sampla, and J. S. Tyagi. 1999. Mycobacterium tuberculosis rrn promoters: differential usage and growth rate-dependent control. J. Bacteriol. 181:4326-4333.
    • (1999) J. Bacteriol. , vol.181 , pp. 4326-4333
    • Verma, A.1    Sampla, A.K.2    Tyagi, J.S.3
  • 37
    • 0028603583 scopus 로고
    • Dormancy of Mycobacterium tuberculosis and latency of disease
    • Wayne, L. G. 1994. Dormancy of Mycobacterium tuberculosis and latency of disease. Eur. J. Clin. Microbiol. Infect. Dis. 13:908-914.
    • (1994) Eur. J. Clin. Microbiol. Infect. Dis. , vol.13 , pp. 908-914
    • Wayne, L.G.1
  • 38
    • 0034780485 scopus 로고    scopus 로고
    • Nonreplicating persistence of mycobacterium tuberculosis
    • Wayne, L. G., and C. D. Sohaskey. 2001. Nonreplicating persistence of mycobacterium tuberculosis. Annu. Rev. Microbiol. 55:139-163.
    • (2001) Annu. Rev. Microbiol. , vol.55 , pp. 139-163
    • Wayne, L.G.1    Sohaskey, C.D.2
  • 39
    • 0027510647 scopus 로고
    • Microbial competition: Escherichia coli mutants that take over stationary phase cultures
    • Zambrano, M. M., D. A. Siegele, M. Almiron, A. Tormo, and R. Kolter. 1993. Microbial competition: Escherichia coli mutants that take over stationary phase cultures. Science 259:1757-1760.
    • (1993) Science , vol.259 , pp. 1757-1760
    • Zambrano, M.M.1    Siegele, D.A.2    Almiron, M.3    Tormo, A.4    Kolter, R.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.