-
1
-
-
33644875540
-
MODOMICS: a database of RNA modification pathways
-
Dunin-Horkawicz,S., Czerwoniec,A., Gajda,M.J., Feder,M., Grosjean,H. and Bujnicki,J.M. (2006) MODOMICS: a database of RNA modification pathways. Nucleic Acids Res., 34, D145-D149.
-
(2006)
Nucleic Acids Res.
, vol.34
-
-
Dunin-Horkawicz, S.1
Czerwoniec, A.2
Gajda, M.J.3
Feder, M.4
Grosjean, H.5
Bujnicki, J.M.6
-
2
-
-
0032918555
-
The RNA Modification Database: 1999 update
-
Rozenski,J., Crain,P.F. and McCloskey,J.A. (1999) The RNA Modification Database: 1999 update. Nucleic Acids Res., 27, 196-197.
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 196-197
-
-
Rozenski, J.1
Crain, P.F.2
McCloskey, J.A.3
-
3
-
-
0031804156
-
Compilation of tRNA sequences and sequences of tRNA genes
-
Sprinzl,M., Horn,C., Brown,M., Ioudovitch,A. and Steinberg,S. (1998) Compilation of tRNA sequences and sequences of tRNA genes. Nucleic Acids Res., 26, 148-153.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 148-153
-
-
Sprinzl, M.1
Horn, C.2
Brown, M.3
Ioudovitch, A.4
Steinberg, S.5
-
4
-
-
0016362013
-
The general structure of transfer RNA molecules
-
Kim,S.H., Sussman,J.L., Suddath,F.L., Quigley,G.J., McPherson,A., Wang,A.H., Seeman,N.C. and Rich,A. (1974) The general structure of transfer RNA molecules. Proc. Natl Acad. Sci. USA, 71, 4970-4974.
-
(1974)
Proc. Natl Acad. Sci. USA
, vol.71
, pp. 4970-4974
-
-
Kim, S.H.1
Sussman, J.L.2
Suddath, F.L.3
Quigley, G.J.4
McPherson, A.5
Wang, A.H.6
Seeman, N.C.7
Rich, A.8
-
5
-
-
0016354122
-
Structure of yeast phenylalanine tRNA at 3A resolution
-
Robertus,J.D., Ladner,J.E., Finch,J.T., Rhodes,D., Brown,R.S., Clark,B.F. and Klug,A. (1974) Structure of yeast phenylalanine tRNA at 3A resolution. Nature, 250, 546-551.
-
(1974)
Nature
, vol.250
, pp. 546-551
-
-
Robertus, J.D.1
Ladner, J.E.2
Finch, J.T.3
Rhodes, D.4
Brown, R.S.5
Clark, B.F.6
Klug, A.7
-
6
-
-
0001184472
-
Mechanisms of RNA-Modifying and -Editing Enzymes
-
In Grosjean,H. and Benne,R. (eds), American Society for Microbiology, Washington, DC
-
Garcia,G.A. and Goodenough-Lashhua,D.M. (1998) Mechanisms of RNA-Modifying and -Editing Enzymes. In Grosjean,H. and Benne,R. (eds), Modification and Editing of RNA. American Society for Microbiology, Washington, DC, pp. 555-560.
-
(1998)
Modification and Editing of RNA
, pp. 555-560
-
-
Garcia, G.A.1
Goodenough-Lashhua, D.M.2
-
7
-
-
0036795285
-
Two proteins that form a complex are required for 7-methylguanosine modification of yeast tRNA
-
Alexandrov,A., Martzen,M.R. and Phizicky,E.M. (2002) Two proteins that form a complex are required for 7-methylguanosine modification of yeast tRNA. RNA, 8, 1253-1266.
-
(2002)
RNA
, vol.8
, pp. 1253-1266
-
-
Alexandrov, A.1
Martzen, M.R.2
Phizicky, E.M.3
-
8
-
-
0038643071
-
7G46) methyltransferase
-
7G46) methyltransferase. J. Bacteriol., 185, 3238-3243.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 3238-3243
-
-
De Bie, L.G.1
Roovers, M.2
Oudjama, Y.3
Wattiez, R.4
Tricot, C.5
Stalon, V.6
Droogmans, L.7
Bujnicki, J.M.8
-
9
-
-
33645862584
-
7G46) methyltransferase
-
7G46) methyltransferase. Nucleic Acids Res., 34, 1925-1934.
-
(2006)
Nucleic Acids Res.
, vol.34
, pp. 1925-1934
-
-
Zegers, I.1
Gigot, D.2
van Vliet, F.3
Tricot, C.4
Aymerich, S.5
Bujnicki, J.M.6
Kosinski, J.7
Droogmans, L.8
-
10
-
-
10344262083
-
7G46) methyltransferase from Aquifex aeolicus
-
7G46) methyltransferase from Aquifex aeolicus. J. Biol. Chem., 279, 49151-49159.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 49151-49159
-
-
Okamoto, H.1
Watanabe, K.2
Ikeuchi, Y.3
Suzuki, T.4
Endo, Y.5
Hori, H.6
-
11
-
-
17844373810
-
tRNA m7G methyltransferase Trm8p/Trm82p: evidence linking activity to a growth phenotype and implicating Trm82p in maintaining levels of active Trm8p
-
Alexandrov,A., Grayhack,E.J. and Phizicky,E.M. (2005) tRNA m7G methyltransferase Trm8p/Trm82p: evidence linking activity to a growth phenotype and implicating Trm82p in maintaining levels of active Trm8p. RNA, 11, 821-830.
-
(2005)
RNA
, vol.11
, pp. 821-830
-
-
Alexandrov, A.1
Grayhack, E.J.2
Phizicky, E.M.3
-
12
-
-
18944395541
-
The tRNA methylase METTL1 is phosphorylated and inactivated by PKB and RSK in vitro and in cells
-
Cartlidge,R.A., Knebel,A., Peggie,M., Alexandrov,A., Phizicky,E.M. and Cohen,P. (2005) The tRNA methylase METTL1 is phosphorylated and inactivated by PKB and RSK in vitro and in cells. EMBO J., 24, 1696-1705.
-
(2005)
EMBO J.
, vol.24
, pp. 1696-1705
-
-
Cartlidge, R.A.1
Knebel, A.2
Peggie, M.3
Alexandrov, A.4
Phizicky, E.M.5
Cohen, P.6
-
13
-
-
37549067728
-
Structure of the yeast tRNA m7G methylation complex
-
Leulliot,N., Chaillet,M., Durand,D., Ulryck,N., Blondeau,K. and van Tilbeurgh,H. (2008) Structure of the yeast tRNA m7G methylation complex. Structure, 16, 52-61.
-
(2008)
Structure
, vol.16
, pp. 52-61
-
-
Leulliot, N.1
Chaillet, M.2
Durand, D.3
Ulryck, N.4
Blondeau, K.5
van Tilbeurgh, H.6
-
14
-
-
42449110865
-
7G46) methyltransferase (TrmB) stabilizes the dimer structure and enhances fidelity of methylation
-
7G46) methyltransferase (TrmB) stabilizes the dimer structure and enhances fidelity of methylation. Proteins, 71, 1400-1408.
-
(2008)
Proteins
, vol.71
, pp. 1400-1408
-
-
Tomikawa, C.1
Ochi, A.2
Hori, H.3
-
15
-
-
34047187493
-
7G46) methyltransferase (Trm8-Trm82 complex)
-
7G46) methyltransferase (Trm8-Trm82 complex). FEBS Lett., 581, 1599-1604.
-
(2007)
FEBS Lett.
, vol.581
, pp. 1599-1604
-
-
Matsumoto, K.1
Toyooka, T.2
Tomikawa, C.3
Ochi, A.4
Takano, Y.5
Takayanagi, N.6
Endo, Y.7
Hori, H.8
-
16
-
-
29544450711
-
Rapid tRNA decay can result from lack of nonessential modifications
-
Alexandrov,A., Chernyakov,I., Gu,W., Hiley,S.L., Hughes,T.R., Grayhack,E.J. and Phizicky,E.M. (2006) Rapid tRNA decay can result from lack of nonessential modifications. Mol. Cell, 21, 87-96.
-
(2006)
Mol. Cell
, vol.21
, pp. 87-96
-
-
Alexandrov, A.1
Chernyakov, I.2
Gu, W.3
Hiley, S.L.4
Hughes, T.R.5
Grayhack, E.J.6
Phizicky, E.M.7
-
17
-
-
0032821744
-
5C-methyltransferase (Trm4) in yeast Saccharomyces cerevisiae: identification of the gene and substrate specificity of the enzyme
-
5C-methyltransferase (Trm4) in yeast Saccharomyces cerevisiae: identification of the gene and substrate specificity of the enzyme. RNA, 5, 1105-1118.
-
(1999)
RNA
, vol.5
, pp. 1105-1118
-
-
Motorin, Y.1
Grosjean, H.2
-
18
-
-
33644847204
-
A gene involved in modifying transfer RNA is required for fungal pathogenicity and stress tolerance of Colletotrichum lagenarium
-
Takano,Y., Takayanagi,N., Hori,H., Ikeuchi,Y., Suzuki,T., Kimura,A. and Okuno,T. (2006) A gene involved in modifying transfer RNA is required for fungal pathogenicity and stress tolerance of Colletotrichum lagenarium. Mol. Microbiol., 60, 81-92.
-
(2006)
Mol. Microbiol.
, vol.60
, pp. 81-92
-
-
Takano, Y.1
Takayanagi, N.2
Hori, H.3
Ikeuchi, Y.4
Suzuki, T.5
Kimura, A.6
Okuno, T.7
-
19
-
-
0032730861
-
Directed evolution of thermostable kanamycin-resistance gene: a convenient selection marker for Thermus thermophilus
-
Hoseki,J., Yano,T., Koyama,Y., Kuramitsu,S. and Kagamiyama,H. (1999) Directed evolution of thermostable kanamycin-resistance gene: a convenient selection marker for Thermus thermophilus. J. Biochem., 126, 951-956.
-
(1999)
J. Biochem.
, vol.126
, pp. 951-956
-
-
Hoseki, J.1
Yano, T.2
Koyama, Y.3
Kuramitsu, S.4
Kagamiyama, H.5
-
20
-
-
10744233518
-
Increased rigidity of domain structures enhances the stability of a mutant enzyme created by directed evolution
-
Hoseki,J., Okamoto,A., Takada,N., Suenaga,A., Futatsugi,N., Konagaya,A., Taiji,M., Yano,T., Kuramitsu,S. and Kagamiyama,H. (2003) Increased rigidity of domain structures enhances the stability of a mutant enzyme created by directed evolution. Biochemistry, 42, 14469-14475.
-
(2003)
Biochemistry
, vol.42
, pp. 14469-14475
-
-
Hoseki, J.1
Okamoto, A.2
Takada, N.3
Suenaga, A.4
Futatsugi, N.5
Konagaya, A.6
Taiji, M.7
Yano, T.8
Kuramitsu, S.9
Kagamiyama, H.10
-
21
-
-
0033762813
-
Structural genomics projects in Japan
-
Yokoyama,S., Hirota,H., Kigawa,T., Yabuki,T., Shirouzu,M., Terada,T., Ito,Y., Mastuno,Y., Kuroda,Y., Nishimura,Y. et al. (2000) Structural genomics projects in Japan. Nature Struct. Biol., 7, 943-945.
-
(2000)
Nature Struct. Biol.
, vol.7
, pp. 943-945
-
-
Yokoyama, S.1
Hirota, H.2
Kigawa, T.3
Yabuki, T.4
Shirouzu, M.5
Terada, T.6
Ito, Y.7
Mastuno, Y.8
Kuroda, Y.9
Nishimura, Y.10
-
22
-
-
0035850879
-
Disruption of Thermus thermophilus genes by homologous recombination using a thermostable kanamycin-resistant marker
-
Hashimoto,Y., Yano,T. and Kuramitsu,S. (2001) Disruption of Thermus thermophilus genes by homologous recombination using a thermostable kanamycin-resistant marker. FEBS Lett., 506, 231-234.
-
(2001)
FEBS Lett.
, vol.506
, pp. 231-234
-
-
Hashimoto, Y.1
Yano, T.2
Kuramitsu, S.3
-
23
-
-
0036206498
-
Identification and characterization of tRNA (Gm18) methyltransferase from Thermus thermophilus HB8: domain structure and conserved amino acid sequence motifs
-
Hori,H., Suzuki,T., Sugawara,K., Inoue,Y., Shibata,T., Kuramitsu,S., Yokoyama,S., Oshima,T. and Watanabe,K. (2002) Identification and characterization of tRNA (Gm18) methyltransferase from Thermus thermophilus HB8: domain structure and conserved amino acid sequence motifs. Genes Cells, 7, 259-272.
-
(2002)
Genes Cells
, vol.7
, pp. 259-272
-
-
Hori, H.1
Suzuki, T.2
Sugawara, K.3
Inoue, Y.4
Shibata, T.5
Kuramitsu, S.6
Yokoyama, S.7
Oshima, T.8
Watanabe, K.9
-
24
-
-
0028936082
-
Mobilities of modified ribonucleotides on two-dimensional cellulose thin-layer chromatography
-
Keith,G. (1995) Mobilities of modified ribonucleotides on two-dimensional cellulose thin-layer chromatography. Biochimie, 77, 142-144.
-
(1995)
Biochimie
, vol.77
, pp. 142-144
-
-
Keith, G.1
-
25
-
-
68949083484
-
Aquifex aeolicus tRNA (N2 N2-Guanine)-dimethyltransferase (Trm1) catalyzes transfer of methyl groups not only to guanine 26 but also to guanine 27 in tRNA
-
Awai,T., Kimura,S., Tomikawa,C., Ochi,A., Ihsanawati., Bessho,Y., Yokoyama,S., Ohno,S., Nishikawa,K., Yokogawa,T. et al. (2009) Aquifex aeolicus tRNA (N2,N2-Guanine)-dimethyltransferase (Trm1) catalyzes transfer of methyl groups not only to guanine 26 but also to guanine 27 in tRNA. J. Biol. Chem., 284, 20467-20478.
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 20467-20478
-
-
Awai, T.1
Kimura, S.2
Tomikawa, C.3
Ochi, A.4
Ihsanawati, Y.5
Bessho, Y.6
Yokoyama, S.7
Ohno, S.8
Nishikawa, K.9
Yokogawa, T.10
-
26
-
-
0018787071
-
Nucleotide sequence of starfish initiator tRNA
-
Kuchino,Y., Kato,M., Sugisaki,H. and Nishimura,S. (1979) Nucleotide sequence of starfish initiator tRNA. Nucleic Acids Res., 6, 3459-3469.
-
(1979)
Nucleic Acids Res.
, vol.6
, pp. 3459-3469
-
-
Kuchino, Y.1
Kato, M.2
Sugisaki, H.3
Nishimura, S.4
-
27
-
-
1842404152
-
The spoU gene of Escherichia coli, the fourth gene of the spoT operon, is essential for tRNA (Gm18) 20-O-methyltransferase activity
-
Persson,B.C., Jager,G. and Gustafsson,C. (1997) The spoU gene of Escherichia coli, the fourth gene of the spoT operon, is essential for tRNA (Gm18) 20-O-methyltransferase activity. Nucleic Acids Res., 25, 4093-4097.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 4093-4097
-
-
Persson, B.C.1
Jager, G.2
Gustafsson, C.3
-
28
-
-
1842607227
-
Deep knot structure for construction of active site and cofactor binding site of tRNA modification enzyme
-
Nureki,O., Watanabe,K., Fukai,S., Ishii,R., Endo,Y., Hori,H. and Yokoyama,S. (2004) Deep knot structure for construction of active site and cofactor binding site of tRNA modification enzyme. Structure, 12, 593-604.
-
(2004)
Structure
, vol.12
, pp. 593-604
-
-
Nureki, O.1
Watanabe, K.2
Fukai, S.3
Ishii, R.4
Endo, Y.5
Hori, H.6
Yokoyama, S.7
-
29
-
-
15444370839
-
Roles of conserved amino acid sequence motifs in the SpoU (TrmH) RNA methyltransferase family
-
Watanabe,K., Nureki,O., Fuakai,S., Ishii,R., Okamoto,H., Yokoyama,S., Endo,Y. and Hori,H. (2005) Roles of conserved amino acid sequence motifs in the SpoU (TrmH) RNA methyltransferase family. J. Biol. Chem., 280, 10368-10377.
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 10368-10377
-
-
Watanabe, K.1
Nureki, O.2
Fuakai, S.3
Ishii, R.4
Okamoto, H.5
Yokoyama, S.6
Endo, Y.7
Hori, H.8
-
30
-
-
33845919828
-
Functional categorization of the conserved basic amino acid residues in TrmH (tRNA (Gm18) methyltransferase) enzymes
-
Watanabe,K., Nureki,O., Fukai,S., Endo,Y. and Hori,H. (2006) Functional categorization of the conserved basic amino acid residues in TrmH (tRNA (Gm18) methyltransferase) enzymes. J. Biol. Chem., 281, 34630-34639.
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 34630-34639
-
-
Watanabe, K.1
Nureki, O.2
Fukai, S.3
Endo, Y.4
Hori, H.5
-
31
-
-
0037799504
-
Cloning and characterization of tRNA (m1A58) methyltransferase (TrmI) from Thermus thermophilus HB27, a protein required for cell growth at extreme temperatures
-
Droogmans,L., Roovers,M., Bujnicki,J.M., Tricot,C., Hartsch,T., Stalon,V. and Grosjean,H. (2003) Cloning and characterization of tRNA (m1A58) methyltransferase (TrmI) from Thermus thermophilus HB27, a protein required for cell growth at extreme temperatures. Nucleic Acids Res., 31, 2148-2156.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 2148-2156
-
-
Droogmans, L.1
Roovers, M.2
Bujnicki, J.M.3
Tricot, C.4
Hartsch, T.5
Stalon, V.6
Grosjean, H.7
-
32
-
-
0018974885
-
Growth rate-dependent regulation of transfer ribonucleic acid (5-methyluridine) methyltransferase in Escherichia coli B/r
-
Ny,T. and Björk,G.R. (1980) Growth rate-dependent regulation of transfer ribonucleic acid (5-methyluridine) methyltransferase in Escherichia coli B/r. J. Bacteriol., 142, 371-379.
-
(1980)
J. Bacteriol.
, vol.142
, pp. 371-379
-
-
Ny, T.1
Björk, G.R.2
-
33
-
-
0026516467
-
The gene for a tRNA modifying enzyme, m5U54-methyltransferase, is essential for viability in Escherichia coli
-
Persson,B.C., Gustafsson,C., Berg,D.E. and Björk,G.R. (1992) The gene for a tRNA modifying enzyme, m5U54-methyltransferase, is essential for viability in Escherichia coli. Proc. Natl Acad. Sci., USA, 89, 3995-3998.
-
(1992)
Proc. Natl Acad. Sci., USA
, vol.89
, pp. 3995-3998
-
-
Persson, B.C.1
Gustafsson, C.2
Berg, D.E.3
Björk, G.R.4
-
34
-
-
34250859458
-
Amino acid residues of the Escherichia coli tRNA(m5U54)methyltransferase (TrmA) critical for stability, covalent binding of tRNA and enzymatic activity
-
Urbonavicius,J., Jager,G. and Björk,G.R. (2007) Amino acid residues of the Escherichia coli tRNA(m5U54)methyltransferase (TrmA) critical for stability, covalent binding of tRNA and enzymatic activity. Nucleic Acids Res., 35, 3297-3305.
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. 3297-3305
-
-
Urbonavicius, J.1
Jager, G.2
Björk, G.R.3
-
35
-
-
0020362952
-
1G) methyltransferase in Escherichia coli K-12
-
1G) methyltransferase in Escherichia coli K-12. Mol. Gen. Genet., 188, 440-446.
-
(1982)
Mol. Gen. Genet.
, vol.188
, pp. 440-446
-
-
Byström, A.S.1
Björk, G.R.2
-
36
-
-
33751239437
-
1G37) methyltransferase (TrmD) from Aquifex aeolicus
-
1G37) methyltransferase (TrmD) from Aquifex aeolicus. Genes Cells, 11, 1353-1365.
-
(2006)
Genes Cells
, vol.11
, pp. 1353-1365
-
-
Takeda, H.1
Toyooka, T.2
Ikeuchi, Y.3
Yokobori, S.4
Okadome, K.5
Takano, F.6
Oshima, T.7
Suzuki, T.8
Endo, Y.9
Hori, H.10
-
37
-
-
48649085955
-
Stabilization of tRNA (m1G37) methyltransferase [TrmD] from Aquifex aeolicus by an intersubunit disulfide bond formation
-
Toyooka,T., Awai,T., Kanai,T., Imanaka,T. and Hori,H. (2008) Stabilization of tRNA (m1G37) methyltransferase [TrmD] from Aquifex aeolicus by an intersubunit disulfide bond formation. Genes Cells, 13, 807-816.
-
(2008)
Genes Cells
, vol.13
, pp. 807-816
-
-
Toyooka, T.1
Awai, T.2
Kanai, T.3
Imanaka, T.4
Hori, H.5
-
38
-
-
0017887734
-
Yeast seryl tRNA synthetase: two sets of substrate sites involved in aminoacylation
-
Pachmann,U. and Zachau,H.G. (1978) Yeast seryl tRNA synthetase: two sets of substrate sites involved in aminoacylation. Nucleic Acids Res., 5, 961-973.
-
(1978)
Nucleic Acids Res.
, vol.5
, pp. 961-973
-
-
Pachmann, U.1
Zachau, H.G.2
-
39
-
-
22844445708
-
Identification of a novel gene encoding a flavin-dependent tRNA:m5U methyltransferase in bacteria - evolutionary implications
-
Urbonavicius,J., Skouloubris,S., Myllykallio,H. and Grosjean,H. (2005) Identification of a novel gene encoding a flavin-dependent tRNA:m5U methyltransferase in bacteria - evolutionary implications. Nucleic Acids Res., 33, 3955-3964.
-
(2005)
Nucleic Acids Res.
, vol.33
, pp. 3955-3964
-
-
Urbonavicius, J.1
Skouloubris, S.2
Myllykallio, H.3
Grosjean, H.4
-
40
-
-
66349097175
-
Atomic structure of a folate/FADdependent tRNA T54 methyltransferase
-
Nishimasu,H., Ishitani,R., Yamashita,K., Iwashita,C., Hirata,A., Hori,H. and Nureki,O. (2009) Atomic structure of a folate/FADdependent tRNA T54 methyltransferase. Proc. Natl Acad. Sci. USA, 106, 8180-8185.
-
(2009)
Proc. Natl Acad. Sci. USA
, vol.106
, pp. 8180-8185
-
-
Nishimasu, H.1
Ishitani, R.2
Yamashita, K.3
Iwashita, C.4
Hirata, A.5
Hori, H.6
Nureki, O.7
-
41
-
-
0026569325
-
Sequence and base modifications of two phenylalanine-tRNAs from Thermus thermophilus HB8
-
Grawunder,U., Schön,A. and Sprintzl,M. (1992) Sequence and base modifications of two phenylalanine-tRNAs from Thermus thermophilus HB8. Nucleic Acids Res., 20, 137.
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 137
-
-
Grawunder, U.1
Schön, A.2
Sprintzl, M.3
-
42
-
-
0017173794
-
Heat-induced stability of tRNA from an extreme thermophile
-
Watanabe,K., Shinma,M., Oshima,T. and Nishimura,S. (1976) Heat-induced stability of tRNA from an extreme thermophile, Thermus thermophilus. Biochem. Biophys. Res. Commun., 72, 1137-1144.
-
(1976)
Thermus thermophilus. Biochem. Biophys. Res. Commun.
, vol.72
, pp. 1137-1144
-
-
Watanabe, K.1
Shinma, M.2
Oshima, T.3
Nishimura, S.4
-
43
-
-
0343665638
-
How translational accuracy influences reading frame maintenance
-
Farabaugh,P.J. and Björk,G.R. (1999) How translational accuracy influences reading frame maintenance. EMBO J., 18, 1427-1434.
-
(1999)
EMBO J.
, vol.18
, pp. 1427-1434
-
-
Farabaugh, P.J.1
Björk, G.R.2
-
44
-
-
0035801515
-
Improvement of reading frame maintenance is a common function for several tRNA modifications
-
Urbonavicius,J., Qian,Q., Durand,J.M.B., Hagervall,T.G. and Björk,G.R. (2001) Improvement of reading frame maintenance is a common function for several tRNA modifications. EMBO J., 20, 4863-4873.
-
(2001)
EMBO J.
, vol.20
, pp. 4863-4873
-
-
Urbonavicius, J.1
Qian, Q.2
Durand, J.M.B.3
Hagervall, T.G.4
Björk, G.R.5
-
45
-
-
10744229752
-
An RNA-modifying enzyme that governs both the codon and amino acid specificities of isoleucine tRNA
-
Soma,A., Ikeuchi,Y., Kanemasa,S., Kobayashi,K., Ogasawara,N., Ote,T., Kato,J., Watanabe,K., Sekine,Y. and Suzuki,T. (2003) An RNA-modifying enzyme that governs both the codon and amino acid specificities of isoleucine tRNA. Mol. Cell, 12, 689-698.
-
(2003)
Mol. Cell
, vol.12
, pp. 689-698
-
-
Soma, A.1
Ikeuchi, Y.2
Kanemasa, S.3
Kobayashi, K.4
Ogasawara, N.5
Ote, T.6
Kato, J.7
Watanabe, K.8
Sekine, Y.9
Suzuki, T.10
-
46
-
-
0037099742
-
tadA, an essential tRNA-specific adenosine deaminase from Escherichia coli
-
Wolf,J., Gerber,A.P. and Keller,W. (2002) tadA, an essential tRNA-specific adenosine deaminase from Escherichia coli. EMBO J., 21, 3841-3851.
-
(2002)
EMBO J.
, vol.21
, pp. 3841-3851
-
-
Wolf, J.1
Gerber, A.P.2
Keller, W.3
-
47
-
-
31544450286
-
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection
-
Baba,T., Ara,T., Hasegawa,M., Takai,Y., Okumura,Y., Baba,M., Datsenko,K.A., Tomita,M., Wanner,B.L. and Mori,H. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol., 2, 2006-2008.
-
(2006)
Mol. Syst. Biol.
, vol.2
, pp. 2006-2008
-
-
Baba, T.1
Ara, T.2
Hasegawa, M.3
Takai, Y.4
Okumura, Y.5
Baba, M.6
Datsenko, K.A.7
Tomita, M.8
Wanner, B.L.9
Mori, H.10
-
48
-
-
0036855267
-
Physiological analysis of the role of truB in Escherichia coli: a role for tRNA modification in extreme temperature resistance
-
Kinghorn,S.M., O'Byrne,C.P., Booth,I.R. and Stansfield,I. (2002) Physiological analysis of the role of truB in Escherichia coli: a role for tRNA modification in extreme temperature resistance. Microbiology, 148, 3511-3520.
-
(2002)
Microbiology
, vol.148
, pp. 3511-3520
-
-
Kinghorn, S.M.1
O'Byrne, C.P.2
Booth, I.R.3
Stansfield, I.4
-
49
-
-
0027339112
-
The tRNA-(m5U54)-methyltransferase of Escherichia coli is present in two forms in vivo, one of which is present as bound to tRNA and to a 30-end fragment of 16S rRNA
-
Gustafsson,C. and Björk,G.R. (1993) The tRNA-(m5U54)-methyltransferase of Escherichia coli is present in two forms in vivo, one of which is present as bound to tRNA and to a 30-end fragment of 16S rRNA. J. Biol. Chem., 268, 1326-1331.
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 1326-1331
-
-
Gustafsson, C.1
Björk, G.R.2
-
50
-
-
33644854175
-
Temperature-dependent biosynthesis of 2-thioribothymidine of Thermus thermophilus tRNA
-
Shigi,N., Suzuki,T., Terada,T., Shirouzu,M., Yokoyama,S. and Watanabe,K. (2006) Temperature-dependent biosynthesis of 2-thioribothymidine of Thermus thermophilus tRNA. J. Biol. Chem., 281, 2104-2113.
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 2104-2113
-
-
Shigi, N.1
Suzuki, T.2
Terada, T.3
Shirouzu, M.4
Yokoyama, S.5
Watanabe, K.6
-
51
-
-
33744946077
-
Identification of two tRNA thiolation genes required for cell growth at extremely high temperatures
-
Shigi,N., Sakaguchi,Y., Suzuki,T. and Watanabe,K. (2006) Identification of two tRNA thiolation genes required for cell growth at extremely high temperatures. J. Biol. Chem., 281, 14286-14306.
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 14286-14306
-
-
Shigi, N.1
Sakaguchi, Y.2
Suzuki, T.3
Watanabe, K.4
-
52
-
-
0032475871
-
Substrate recognition of tRNA (Guanosine-2′-)-methyltransferase from Thermus thermophilus HB27
-
Hori,H., Yamazaki,N., Matsumoto,T., Watanabe,Y., Ueda,T., Nishikawa,K., Kumagai,I. and Watanabe,K. (1998) Substrate recognition of tRNA (Guanosine-2′-)-methyltransferase from Thermus thermophilus HB27. J. Biol. Chem., 273, 25721-25727.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 25721-25727
-
-
Hori, H.1
Yamazaki, N.2
Matsumoto, T.3
Watanabe, Y.4
Ueda, T.5
Nishikawa, K.6
Kumagai, I.7
Watanabe, K.8
-
53
-
-
0036776779
-
Three modifications in the D and T arms of tRNA influence translation in Escherichia coli and expression of virulence genes in Shigella flexneri
-
Urbonavicius,J., Durand,J.M. and Björk,G.R. (2002) Three modifications in the D and T arms of tRNA influence translation in Escherichia coli and expression of virulence genes in Shigella flexneri. J. Bacteriol., 184, 5348-5357.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 5348-5357
-
-
Urbonavicius, J.1
Durand, J.M.2
Björk, G.R.3
-
54
-
-
0024316220
-
Prevention of translational frameshifting by the modified nucleoside 1-methylguanosine
-
Björk,G.R., Wikström,P.M. and Byström,A.S. (1989) Prevention of translational frameshifting by the modified nucleoside 1-methylguanosine. Science, 244, 986-989.
-
(1989)
Science
, vol.244
, pp. 986-989
-
-
Björk, G.R.1
Wikström, P.M.2
Byström, A.S.3
-
55
-
-
0020479290
-
A thermostable tRNA (guanosine-2′)-methyltransferase from Thermus thermophilus HB27 and the effect of ribose methylation on the conformational stability of tRNA
-
Kumagai,I., Watanabe,K. and Oshima,T. (1982) A thermostable tRNA (guanosine-2′)-methyltransferase from Thermus thermophilus HB27 and the effect of ribose methylation on the conformational stability of tRNA. J. Biol. Chem., 257, 7388-7395.
-
(1982)
J. Biol. Chem.
, vol.257
, pp. 7388-7395
-
-
Kumagai, I.1
Watanabe, K.2
Oshima, T.3
-
56
-
-
0032428969
-
The essential Gcd10p-Gcd14p nuclear complex is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA
-
Anderson,J., Phan,L., Cuesta,R., Carison,B.A., Pak,M., Asano,K., Björk,G.R., Tamame,M. and Hinnebusch,A.G. (1998) The essential Gcd10p-Gcd14p nuclear complex is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA. Genes Dev., 12, 3650-3652.
-
(1998)
Genes Dev.
, vol.12
, pp. 3650-3652
-
-
Anderson, J.1
Phan, L.2
Cuesta, R.3
Carison, B.A.4
Pak, M.5
Asano, K.6
Björk, G.R.7
Tamame, M.8
Hinnebusch, A.G.9
-
57
-
-
0034625166
-
The Gcd10p/Gcd14p complex is the essential two-subunit tRNA (1-methyladenosine) methyltransferase of Saccharomyces cerevisiae
-
Anderson,J., Phan,L. and Hinnebusch,A.G. (2000) The Gcd10p/Gcd14p complex is the essential two-subunit tRNA (1-methyladenosine) methyltransferase of Saccharomyces cerevisiae. Proc. Natl Acad. Sci. USA, 97, 5173-5178.
-
(2000)
Proc. Natl Acad. Sci. USA
, vol.97
, pp. 5173-5178
-
-
Anderson, J.1
Phan, L.2
Hinnebusch, A.G.3
|