-
1
-
-
0242573148
-
The isotope array, a new tooi that employs substrate-mediated labeling of rRNA for determination of microbial community structure and function
-
Adamczyk, J., M. Hesselsoe, N. Iversen, M. Horn, A. Lehner, P. H. Nielsen, M. Schloter, F. Roslev, and M. Wagner. 2003. The isotope array, a new tooi that employs substrate-mediated labeling of rRNA for determination of microbial community structure and function. Appl. Environ. Microbiol. 69: 6875-6887.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 6875-6887
-
-
Adamczyk, J.1
Hesselsoe, M.2
Iversen, N.3
Horn, M.4
Lehner, A.5
Nielsen, P.H.6
Schloter, M.7
Roslev, F.8
Wagner, M.9
-
2
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S. F., W. Gish, W. Miller, E. W. Myers, and D. J. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
3
-
-
0035895787
-
Analysis of nonvolatile species in a complex matrix by headspace gas chromatography
-
Chai, X. S., Q. Luo, and J. Y. Zhu. 2001. Analysis of nonvolatile species in a complex matrix by headspace gas chromatography. J. Chromatogr. A 909:249-257.
-
(2001)
J. Chromatogr. A
, vol.909
, pp. 249-257
-
-
Chai, X.S.1
Luo, Q.2
Zhu, J.Y.3
-
4
-
-
0014599264
-
The effect of ciliated protozoa on the fate of Escherichia coli in the activated-sludge process
-
Curds, C. R., and G. J. Fey. 1969. The effect of ciliated protozoa on the fate of Escherichia coli in the activated-sludge process. Water Res. 3:853-867.
-
(1969)
Water Res.
, vol.3
, pp. 853-867
-
-
Curds, C.R.1
Fey, G.J.2
-
5
-
-
0021970492
-
The small-subunit rRNA gene sequences from the hypotrichous ciliates Oxytricha nova and Stylonychia pustulata
-
Elwood, H. J., G. J. Olsen, and M. L. Sogin. 1985. The small-subunit rRNA gene sequences from the hypotrichous ciliates Oxytricha nova and Stylonychia pustulata. Mol. Biol. Evol. 2:399-410.
-
(1985)
Mol. Biol. Evol.
, vol.2
, pp. 399-410
-
-
Elwood, H.J.1
Olsen, G.J.2
Sogin, M.L.3
-
6
-
-
0025573874
-
Anaerobic free-living protozoa: Growth efficiencies and the structure of anaerobic communities
-
Fenchel, T., and B. J. Finlay. 1990. Anaerobic free-living protozoa: growth efficiencies and the structure of anaerobic communities. FEMS Microbiol. Ecol. 74:269-275.
-
(1990)
FEMS Microbiol. Ecol.
, vol.74
, pp. 269-275
-
-
Fenchel, T.1
Finlay, B.J.2
-
7
-
-
58549097704
-
Use of stable isotope-labeled cells to identify active grazers of picocyanobacteria in ocean surface waters
-
Frias-Lopez, J., A. Thompson, J. Waldbauer, and S. W. Chisholm. 2009. Use of stable isotope-labeled cells to identify active grazers of picocyanobacteria in ocean surface waters. Environ. Microbiol. 11:512-525.
-
(2009)
Environ. Microbiol.
, vol.11
, pp. 512-525
-
-
Frias-Lopez, J.1
Thompson, A.2
Waldbauer, J.3
Chisholm, S.W.4
-
8
-
-
0037265329
-
On the dynamics and function of ciliates in sequencing batch biofilm reactors
-
Fried, J., and H. Lemmer. 2003. On the dynamics and function of ciliates in sequencing batch biofilm reactors. Water Sci. Technol. 47:189-196.
-
(2003)
Water Sci. Technol.
, vol.47
, pp. 189-196
-
-
Fried, J.1
Lemmer, H.2
-
9
-
-
0346499634
-
Use of stable-isotope probing, full-cycle rRNA analysis, and fluorescence in situ hybridization-microautoradiography to study a methanol-fed denitrifying microbial community
-
Ginige, M. P., P. Hugenholtz, H. Daims, M. Wagner, J. Keller, and L. L. Blackall. 2004. Use of stable-isotope probing, full-cycle rRNA analysis, and fluorescence in situ hybridization-microautoradiography to study a methanol-fed denitrifying microbial community. Appl. Environ. Microbiol. 70:588-596.
-
(2004)
Appl. Environ. Microbiol.
, vol.70
, pp. 588-596
-
-
Ginige, M.P.1
Hugenholtz, P.2
Daims, H.3
Wagner, M.4
Keller, J.5
Blackall, L.L.6
-
10
-
-
29144450332
-
Invest, of an acetate-fed denitrifying microbial community by stable isotope probing, full-cycle rRNA analysis, and fluorescent in situ, hybridization-microautoradiography
-
Ginige, M. P., J. Keller, and L. L. Blackall. 2005. Invest, of an acetate-fed denitrifying microbial community by stable isotope probing, full-cycle rRNA analysis, and fluorescent in situ, hybridization- microautoradiography. Appl. Environ. Microbiol. 71:8683-8691.
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, pp. 8683-8691
-
-
Ginige, M.P.1
Keller, J.2
Blackall, L.L.3
-
11
-
-
58549114229
-
13C-isotope analyses reveal that chemolithoautotrophic gamma- And epsilonproteobacteria feed a microbial food web in a pelagic redoxcline of the central Baltic Sea
-
Glaubitz, S., T. Lueders, W. R. Abraham, G. Jost, K. Jurgens, and M. Labrenz. 2009. 13C-isotope analyses reveal that chemolithoautotrophic gamma- and epsilonproteobacteria feed a microbial food web in a pelagic redoxcline of the central Baltic Sea. Environ. Microbiol. 11:326-337.
-
(2009)
Environ. Microbiol.
, vol.11
, pp. 326-337
-
-
Glaubitz, S.1
Lueders, T.2
Abraham, W.R.3
Jost, G.4
Jurgens, K.5
Labrenz, M.6
-
12
-
-
0000803388
-
The population frequencies of species and the estimation of the population parameters
-
Good, I. J. 1953. The population frequencies of species and the estimation of the population parameters. Biometrika 40:237-264.
-
(1953)
Biometrika
, vol.40
, pp. 237-264
-
-
Good, I.J.1
-
14
-
-
0000304419
-
Influence of phagotrophic processes on the regeneration of nutrients in two stage continuous culture systems
-
Giide, H. 1985. Influence of phagotrophic processes on the regeneration of nutrients in two stage continuous culture systems. Microb. Ecol. 11:193-204.
-
(1985)
Microb. Ecol.
, vol.11
, pp. 193-204
-
-
Giide, H.1
-
15
-
-
0345215177
-
Grazing pressure by a bacterivorous flagellate reverses the relative abundance of Comamonas acidovorans PX54 and Vibrio strain CB5 in chemostat cocultures
-
Hahn, M. W., and M. G. Hofle. 1998. grazing pressure by a bacterivorous flagellate reverses the relative abundance of Comamonas acidovorans PX54 and Vibrio strain CB5 in chemostat cocultures. Appl. Environ. Microbiol. 64:1910-1918.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 1910-1918
-
-
Hahn, M.W.1
Hofle, M.G.2
-
16
-
-
77950276949
-
Modelling microfauna influence on nitrification in aerobic biofilm processes. Int. IAWQ Conf. Workshop Biofilm Struct
-
Jeppsson, U., N. M. Lee, and H. Aspergen. 1995. Modelling microfauna influence on nitrification in aerobic biofilm processes. Int. IAWQ Conf. Workshop Biofilm Struct. Growth Dynamics 1995:77-85.
-
(1995)
Growth Dynamics
, vol.1995
, pp. 77-85
-
-
Jeppsson, U.1
Lee, N.M.2
Aspergen, H.3
-
17
-
-
17144379264
-
Food selection by bacterivorous protists: Insight from the analysis of the food vacuole content by means of fluorescence in situ hybridization
-
Jezbera, J., K. Hornak, and K. Simek. 2005. Food selection by bacterivorous protists: insight from the analysis of the food vacuole content by means of fluorescence in situ hybridization. FEMS Microbiol. Ecol. 52:351-363.
-
(2005)
FEMS Microbiol. Ecol.
, vol.52
, pp. 351-363
-
-
Jezbera, J.1
Hornak, K.2
Simek, K.3
-
18
-
-
0036427039
-
Predation as a shaping force for the phenotypic and genotypic composition of planktonic bacteria
-
Jürgens, K., and C. Matz. 2002. Predation as a shaping force for the phenotypic and genotypic composition of planktonic bacteria. Antonie Van Leeuwenhoek 81:413-434.
-
(2002)
Antonie Van Leeuwenhoek
, vol.81
, pp. 413-434
-
-
Jürgens, K.1
Matz, C.2
-
19
-
-
33646584483
-
RNA-based stable isotope probing and isolation of anaerobic benzene-degrading bacteria from gasoline-contaminated groundwater
-
Kasai, Y., Y. Takahata, M. Manefield, and K. Watanabe. 2006. RNA-based stable isotope probing and isolation of anaerobic benzene-degrading bacteria from gasoline-contaminated groundwater. Appl. Environ. Microbiol. 72: 3586-3592.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 3586-3592
-
-
Kasai, Y.1
Takahata, Y.2
Manefield, M.3
Watanabe, K.4
-
20
-
-
0028167656
-
Influence of predators on nitrification in aerobic biofilm processes
-
Lee, N. M., and T. Welander. 1994. Influence of predators on nitrification in aerobic biofilm processes. Water Sci. Technol. 29:355-363.
-
(1994)
Water Sci. Technol.
, vol.29
, pp. 355-363
-
-
Lee, N.M.1
Welander, T.2
-
21
-
-
0041932210
-
Effects of predation and ORF conditions on the performance of nitrifiers in activated sludge systems
-
Lee, Y., and J. A. Oleszkiewicz. 2003. Effects of predation and ORF conditions on the performance of nitrifiers in activated sludge systems. Water Res. 37:4202-4210.
-
(2003)
Water Res.
, vol.37
, pp. 4202-4210
-
-
Lee, Y.1
Oleszkiewicz, J.A.2
-
22
-
-
0035252640
-
Unexpected diversity of small eukaryotes in deep-sea Antarctic plankton
-
Lopez-Garcia, P., F. Rodriguez-Valera, C. Pedros-Alio, and D. Moreira. 2001. Unexpected diversity of small eukaryotes in deep-sea Antarctic plankton. Nature 409:603-607.
-
(2001)
Nature
, vol.409
, pp. 603-607
-
-
Lopez-Garcia, P.1
Rodriguez-Valera, F.2
Pedros-Alio, C.3
Moreira, D.4
-
23
-
-
33747348104
-
Identification of bacterial micropredators distinctively active in a soil microbial food web
-
Lueders, T., R. Kindler, A. Miltner, M. W. Friedrich, and M. Kaestner. 2006. Identification of bacterial micropredators distinctively active in a soil microbial food web. Appl. Environ. Microbiol. 72:5342-5348.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 5342-5348
-
-
Lueders, T.1
Kindler, R.2
Miltner, A.3
Friedrich, M.W.4
Kaestner, M.5
-
24
-
-
0842266321
-
Stable isotope probing of rRNA and DNA reveals a dynamic methylotroph community and trophic interactions with fungi and protozoa in oxic rice field soil
-
Lueders, T., B. Wagner, P. Claus, and M. W. Friedrich. 2004. Stable isotope probing of rRNA and DNA reveals a dynamic methylotroph community and trophic interactions with fungi and protozoa in oxic rice field soil. Environ. Microbiol. 6:60-72.
-
(2004)
Environ. Microbiol.
, vol.6
, pp. 60-72
-
-
Lueders, T.1
Wagner, B.2
Claus, P.3
Friedrich, M.W.4
-
25
-
-
34047272524
-
Insights into the fate of a 13C-labeled phenol pulse for stable isotope probing (SIP) experiments
-
Manefield, M., R. Griffiths, N. P. McNamara, D. Sleep, N. Ostle, and A. Whiteley. 2007. Insights into the fate of a 13C-labeled phenol pulse for stable isotope probing (SIP) experiments. J. Microbiol. Methods 69:340-344.
-
(2007)
J. Microbiol. Methods
, vol.69
, pp. 340-344
-
-
Manefield, M.1
Griffiths, R.2
McNamara, N.P.3
Sleep, D.4
Ostle, N.5
Whiteley, A.6
-
26
-
-
0036840287
-
RNA stable isotope probing, a novel means of linking microbial community function to phylogeny
-
Manefield, M., A. S. Whiteley, R. I. Griffiths, and M. J. Bailey. 2002. RNA stable isotope probing, a novel means of linking microbial community function to phylogeny. Appl. Environ. Microbiol. 68:5367-5373.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 5367-5373
-
-
Manefield, M.1
Whiteley, A.S.2
Griffiths, R.I.3
Bailey, M.J.4
-
27
-
-
0035133653
-
Biofilm communities and operational monitoring of a rotating biological contactor system
-
Martin-Cereceda, M., S. Serrano, and A. Guinea. 2001. Biofilm communities and operational monitoring of a rotating biological contactor system. SO Water Air Soil Pollut. 126:193-206.
-
(2001)
SO Water Air Soil Pollut.
, vol.126
, pp. 193-206
-
-
Martin-Cereceda, M.1
Serrano, S.2
Guinea, A.3
-
28
-
-
0036133120
-
Enumeration of acetate-consuming bacteria by microautoradiography under oxygen and nitrate respiring conditions in activated sludge
-
Nielsen, J. L., and P. H. Nielsen. 2002. Enumeration of acetate-consuming bacteria by microautoradiography under oxygen and nitrate respiring conditions in activated sludge. Water Res. 36:421-428.
-
(2002)
Water Res.
, vol.36
, pp. 421-428
-
-
Nielsen, J.L.1
Nielsen, P.H.2
-
29
-
-
30344457573
-
Nitrification in activated sludge batch reactors is linked to protozoan grazing of the bacterial population
-
Petropoulos, P., and K. A. Gilbride. 2005. Nitrification in activated sludge batch reactors is linked to protozoan grazing of the bacterial population. Can. J. Microbiol. 51:791-799.
-
(2005)
Can. J. Microbiol.
, vol.51
, pp. 791-799
-
-
Petropoulos, P.1
Gilbride, K.A.2
-
30
-
-
34547730143
-
Impact of protozoan grazing on nitrification and the ammonia- And nitrite-oxidizing bacterial communities in activated sludge
-
Pogue, A. J., and K. A. Gilbride. 2007. Impact of protozoan grazing on nitrification and the ammonia- and nitrite-oxidizing bacterial communities in activated sludge. Can. J. Microbiol. 53:559-571.
-
(2007)
Can. J. Microbiol.
, vol.53
, pp. 559-571
-
-
Pogue, A.J.1
Gilbride, K.A.2
-
31
-
-
0029656278
-
Effects of protozoa on carbon mineralization in activated sludge
-
Ratsak, C. H., K. A. Maarsen, and S. A. L. M. Kooijman. 1996. Effects of protozoa on carbon mineralization in activated sludge. Water Res. 30:10-12.
-
(1996)
Water Res.
, vol.30
, pp. 10-12
-
-
Ratsak, C.H.1
Maarsen, K.A.2
Kooijman, S.A.L.M.3
-
32
-
-
0031457752
-
Using metazoa to reduce sludge production
-
Rensink, J. H., and W. H. Rulkens. 1997. Using metazoa to reduce sludge production. Water Sci. Technol. 36:171-179.
-
(1997)
Water Sci. Technol.
, vol.36
, pp. 171-179
-
-
Rensink, J.H.1
Rulkens, W.H.2
-
33
-
-
0036422782
-
Significance of predation by protists in aquatic microbial food webs
-
Sherr, E. B., and B. F. Sherr. 2002. Significance of predation by protists in aquatic microbial food webs. Antonie Van Leeuwenhoek 81:293-308.
-
(2002)
Antonie Van Leeuwenhoek
, vol.81
, pp. 293-308
-
-
Sherr, E.B.1
Sherr, B.F.2
-
34
-
-
0001360979
-
Natural abundance of the stable isotopes of carbon in biological systems
-
Smith, B. N. 1972. Natural abundance of the stable isotopes of carbon in biological systems. Bioscience 22:226-231.
-
(1972)
Bioscience
, vol.22
, pp. 226-231
-
-
Smith, B.N.1
-
35
-
-
22744434140
-
Different marine heterotrophic nanoflagellates affect differentially the composition of enriched bacterial
-
Vazquez-Dominguez, E., E. O. Casamayor, P. Catala, and P. Lebaron. 2005. Different marine heterotrophic nanoflagellates affect differentially the composition of enriched bacterial communities. Microb. Ecol. 49:474-485.
-
(2005)
Communities. Microb. Ecol.
, vol.49
, pp. 474-485
-
-
Vazquez-Dominguez, E.1
Casamayor, E.O.2
Catala, P.3
Lebaron, P.4
-
36
-
-
0036624935
-
Bacterial community composition and function in sewage treatment systems
-
Wagner, M., and A. Loy. 2002. Bacterial community composition and function in sewage treatment systems. Curr. Opin. Biotechnol. 13:218-227.
-
(2002)
Curr. Opin. Biotechnol.
, vol.13
, pp. 218-227
-
-
Wagner, M.1
Loy, A.2
|