-
1
-
-
33646198860
-
Pharmaco-metabonomic phenotyping and personalized drug treatment
-
Clayton, T.A. et al. Pharmaco-metabonomic phenotyping and personalized drug treatment. Nature 440, 1073-1077 (2006).
-
(2006)
Nature
, vol.440
, pp. 1073-1077
-
-
Clayton, T.A.1
-
2
-
-
34248139693
-
Pharmacometabonomic phenotyping reveals diferent responses to xenobiotic intervention in rats
-
Li, H. et al. Pharmacometabonomic phenotyping reveals diferent responses to xenobiotic intervention in rats. J. Proteome Res. 6, 1364-1370 (2007).
-
(2007)
J. Proteome Res.
, vol.6
, pp. 1364-1370
-
-
Li, H.1
-
3
-
-
36348960223
-
Prediction and classifcation of drug toxicity using probabilistic modeling of temporal metabolic data: The consortium on metabonomic toxicology screening approach
-
Ebbels, T.M. et al. Prediction and classifcation of drug toxicity using probabilistic modeling of temporal metabolic data: the consortium on metabonomic toxicology screening approach. J. Proteome Res. 6, 4407-4422 (2007).
-
(2007)
J. Proteome Res.
, vol.6
, pp. 4407-4422
-
-
Ebbels, T.M.1
-
4
-
-
28444480986
-
Metabonomic modeling of drug toxicity
-
Keun, H.C. Metabonomic modeling of drug toxicity. Pharmacol. Ther. 109, 92-106 (2006).
-
(2006)
Pharmacol. Ther.
, vol.109
, pp. 92-106
-
-
Keun, H.C.1
-
5
-
-
0025797108
-
Genetic and environmental factors causing variation in drug response
-
Vesell, E.S. Genetic and environmental factors causing variation in drug response. Mutat. Res. 247, 241-257 (1991).
-
(1991)
Mutat. Res.
, vol.247
, pp. 241-257
-
-
Vesell, E.S.1
-
6
-
-
0034844646
-
Clinical application of pharmacogenetics
-
Spear, B.B., Heath-Chiozzi, M. & Huf, J. Clinical application of pharmacogenetics. Trends. Mol. Med. 7, 201-204 (2001).
-
(2001)
Trends. Mol. Med.
, vol.7
, pp. 201-204
-
-
Spear, B.B.1
Heath-Chiozzi, M.2
Huf, J.3
-
7
-
-
0036808725
-
Role of genetic and expression profling in pharmacogenomics: The changing face of patient management
-
Pagliarulo, V., Datar, R.H. & Cote, R.J. Role of genetic and expression profling in pharmacogenomics: the changing face of patient management. Curr. Issues Mol. Biol. 4, 101-110 (2002).
-
(2002)
Curr. Issues Mol. Biol.
, vol.4
, pp. 101-110
-
-
Pagliarulo, V.1
Datar, R.H.2
Cote, R.J.3
-
8
-
-
0347185032
-
Pharmacogenomics and "individualized drug therapy": High expectations and disappointing achievements
-
Nebert, D.W., Jorge-Nebert, L. & Vesell, E.S. Pharmacogenomics and "individualized drug therapy": high expectations and disappointing achievements. Am. J. Pharmacogenomics 3, 361-370 (2003).
-
(2003)
Am. J. Pharmacogenomics
, vol.3
, pp. 361-370
-
-
Nebert, D.W.1
Jorge-Nebert, L.2
Vesell, E.S.3
-
9
-
-
36448979900
-
Limitations of pharmacogenomic predictor discovery in Phase II clinical trials
-
Pusztai, L. Limitations of pharmacogenomic predictor discovery in Phase II clinical trials. Pharmacogenomics 8, 1443-1448 (2007).
-
(2007)
Pharmacogenomics
, vol.8
, pp. 1443-1448
-
-
Pusztai, L.1
-
10
-
-
33748331156
-
Omics dreams of personalized healthcare
-
Nicholson, J.K. Omics dreams of personalized healthcare. J. Proteome Res. 5, 2067, 2069 (2006).
-
(2006)
J. Proteome Res.
, vol.5
, pp. 2067-2069
-
-
Nicholson, J.K.1
-
11
-
-
33750202863
-
Can personalized drug therapy be achieved? a closer look at pharmaco-metabonomics
-
Nebert, D.W. & Vesell, E.S. Can personalized drug therapy be achieved? a closer look at pharmaco-metabonomics. Trends Pharmacol. Sci. 27, 580-586 (2006).
-
(2006)
Trends Pharmacol. Sci.
, vol.27
, pp. 580-586
-
-
Nebert, D.W.1
Vesell, E.S.2
-
12
-
-
34249020844
-
Global metabolic profling and its role in systems biology to advance personalized medicine in the 21st century
-
Schnackenberg, L.K. Global metabolic profling and its role in systems biology to advance personalized medicine in the 21st century. Expert Rev. Mol. Diagn. 7, 247-259 (2007).
-
(2007)
Expert Rev. Mol. Diagn.
, vol.7
, pp. 247-259
-
-
Schnackenberg, L.K.1
-
13
-
-
33750719994
-
Global systems biology, personalized medicine and molecular epidemiology
-
Nicholson, J.K. Global systems biology, personalized medicine and molecular epidemiology. Mol. Syst. Biol. 2, 52 (2006).
-
(2006)
Mol. Syst. Biol.
, vol.2
, pp. 52
-
-
Nicholson, J.K.1
-
14
-
-
41149162296
-
Metabolomics:a global biochemical approach to drug response and disease
-
Kaddurah-Daouk, R., Kristal, B.S. & Weinshilboum, R.M. Metabolomics: a global biochemical approach to drug response and disease. Annu. Rev. Pharmacol. Toxicol. 48, 653-683 (2008).
-
(2008)
Annu. Rev. Pharmacol. Toxicol.
, vol.48
, pp. 653-683
-
-
Kaddurah-Daouk, R.1
Kristal, B.S.2
Weinshilboum, R.M.3
-
15
-
-
0036463681
-
Metabonomics:a platform for studying drug toxicity and gene function
-
Nicholson, J.K., Connelly, J., Lindon, J.C. & Holmes, E. Metabonomics: a platform for studying drug toxicity and gene function. Nat. Rev. Drug Discov. 1, 153-161 (2002).
-
(2002)
Nat. Rev. Drug Discov.
, vol.1
, pp. 153-161
-
-
Nicholson, J.K.1
Connelly, J.2
Lindon, J.C.3
Holmes, E.4
-
16
-
-
33750475205
-
Metabolomics-based systems biology and personalized medicine: Moving towards n = 1 clinical trials?
-
van der Greef, J., Hankemeier, T. & McBurney, R.N. Metabolomics-based systems biology and personalized medicine: moving towards n = 1 clinical trials? Pharmacogenomics 7, 1087-1094 (2006).
-
(2006)
Pharmacogenomics
, vol.7
, pp. 1087-1094
-
-
Van Der Greef, J.1
Hankemeier, T.2
McBurney, R.N.3
-
17
-
-
70349898794
-
Individual human phenotypes in metabolic space and time
-
Bernini, P. et al. Individual human phenotypes in metabolic space and time. J. Proteome Res. 8, 4264-4271 (2009).
-
(2009)
J. Proteome Res.
, vol.8
, pp. 4264-4271
-
-
Bernini, P.1
-
18
-
-
1542400266
-
Inverse modeling using multi-block PLS to determine the environmental conditions that provide optimal cellular function
-
Hwang, D., Stephanopoulos, G. & Chan, C. Inverse modeling using multi-block PLS to determine the environmental conditions that provide optimal cellular function. Bioinformatics 20, 487-499 (2004).
-
(2004)
Bioinformatics
, vol.20
, pp. 487-499
-
-
Hwang, D.1
Stephanopoulos, G.2
Chan, C.3
-
19
-
-
0037357613
-
Application of multivariate analysis to optimize function of cultured hepatocytes
-
Chan, C., Hwang, D., Stephanopoulos, G.N., Yarmush, M.L. & Stephanopoulos, G. application of multivariate analysis to optimize function of cultured hepatocytes. Biotechnol. Prog. 19, 580-598 (2003).
-
(2003)
Biotechnol. Prog.
, vol.19
, pp. 580-598
-
-
Chan, C.1
Hwang, D.2
Stephanopoulos, G.N.3
Yarmush, M.L.4
Stephanopoulos, G.5
-
20
-
-
0035965479
-
Some recent developments in PLS modeling
-
Wold, S.,Trygg, J.,Berglund, A. & Antti, H. Some recent developments in PLS modeling. Chemometr. Intellig. Lab. Syst. 58, 131-150 (2001).
-
(2001)
Chemometr. Intellig. Lab. Syst.
, vol.58
, pp. 131-150
-
-
Wold, S.1
Berglund, A.2
Antti, H.3
-
21
-
-
0029586398
-
Clinical pharmacokinetics of tacrolimus
-
Venkataramanan, R. et al. Clinical pharmacokinetics of tacrolimus. Clin. Pharmacokinet. 29, 404-430 (1995).
-
(1995)
Clin. Pharmacokinet.
, vol.29
, pp. 404-430
-
-
Venkataramanan, R.1
-
22
-
-
43749087841
-
Human metabolic phenotype diversity and its association with diet and blood pressure
-
Holmes, E. et al. Human metabolic phenotype diversity and its association with diet and blood pressure. Nature 453, 396-400 (2008).
-
(2008)
Nature
, vol.453
, pp. 396-400
-
-
Holmes, E.1
-
23
-
-
60149091657
-
Metabolomic profles delineate potential role for sarcosine in prostate cancer progression
-
Sreekumar, a. et al. Metabolomic profles delineate potential role for sarcosine in prostate cancer progression. Nature 457, 910-914(2009).
-
(2009)
Nature
, vol.457
, pp. 910-914
-
-
Sreekumar, A.1
-
24
-
-
33847377098
-
From exogenous to endogenous: The inevitable imprint of mass spectrometry in metabolomics
-
Want, E.J., Nordström, A., Morita, H. & Siuzdak, G. From exogenous to endogenous: the inevitable imprint of mass spectrometry in metabolomics. J. Proteome Res. 6, 459-468 (2007).
-
(2007)
J. Proteome Res.
, vol.6
, pp. 459-468
-
-
Want, E.J.1
Nordström, A.2
Morita, H.3
Siuzdak, G.4
-
25
-
-
41149178478
-
LC-MS-based methodology for global metabolite profling in metabonomics/metabolomics
-
Theodoridisa, G.,Gika, H.G. & Wilson, I.D. LC-MS-based methodology for global metabolite profling in metabonomics/metabolomics. TrAC Trends Anal. Chem. 27, 251-260 (2008).
-
(2008)
TrAC Trends Anal. Chem.
, vol.27
, pp. 251-260
-
-
Theodoridisa, G.1
Gika, H.G.2
Wilson, I.D.3
-
26
-
-
32444446805
-
XCMS: Processing mass spectrometry data for metabolite profling using nonlinear peak alignment, matching, and identifcation
-
Smith, C.A., Want, E.J., O'Maille, G., abagyan, R. & Siuzdak, G. XCMS: processing mass spectrometry data for metabolite profling using nonlinear peak alignment, matching, and identifcation. Anal. Chem. 78, 779-787 (2006)
-
(2006)
Anal. Chem.
, vol.78
, pp. 779-787
-
-
Smith, C.A.1
Want, E.J.2
O'Maille, G.3
Abagyan, R.4
Siuzdak, G.5
-
27
-
-
33646743247
-
Nonlinear data alignment for UPLC-MS and HPLC-MS based metabolomics: Quantitative analysis of endogenous and exogenous metabolites in human serum
-
Nordström, A., O'Maille, G., Qin, C. & Siuzdak, G. Nonlinear data alignment for UPLC-MS and HPLC-MS based metabolomics: quantitative analysis of endogenous and exogenous metabolites in human serum. Anal. Chem. 78, 3289-3295 (2006).
-
(2006)
Anal. Chem.
, vol.78
, pp. 3289-3295
-
-
Nordström, A.1
O'Maille, G.2
Qin, C.3
Siuzdak, G.4
-
28
-
-
0037316303
-
A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
-
Bolstad, B.M., Irizarry, R.A., astrand, M. & Speed, T.P. a comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics 19, 185-193 (2003).
-
(2003)
Bioinformatics
, vol.19
, pp. 185-193
-
-
Bolstad, B.M.1
Irizarry, R.2
Astrand, M.3
Speed, T.P.4
-
29
-
-
33947166897
-
A randomized, open-label, two-period, crossover bioavailability study of two oral formulations of tacrolimus in healthy Korean adults
-
Park, K., Kim, Y.S., Kwon, K.I., Park, M.S., Lee, Y.J. & Kim, K.H. a randomized, open-label, two-period, crossover bioavailability study of two oral formulations of tacrolimus in healthy Korean adults. Clin. Ther. 29, 154-162 (2007).
-
(2007)
Clin. Ther.
, vol.29
, pp. 154-162
-
-
Park, K.1
Kim, Y.S.2
Kwon, K.I.3
Park, M.S.4
Lee, Y.J.5
Kim, K.H.6
-
30
-
-
34447324148
-
Infuence of the CYP3a5 and MDR1 genetic polymorphisms on the pharmacokinetics of tacrolimus in healthy Korean subjects
-
Choi, J.H., Lee, Y.J., Jang, S.B., Lee, J.E., Kim, K.H. & Park, K. Infuence of the CYP3a5 and MDR1 genetic polymorphisms on the pharmacokinetics of tacrolimus in healthy Korean subjects. Br. J. Clin. Pharmacol. 64, 185-191 (2007)
-
(2007)
Br. J. Clin. Pharmacol.
, vol.64
, pp. 185-191
-
-
Choi, J.H.1
Lee, Y.J.2
Jang, S.B.3
Lee, J.E.4
Kim, K.H.5
Park, K.6
-
31
-
-
0033517115
-
Latent variable multivariate regression modeling
-
Burnham, a.J.,MacGregor, J.F. & Viveros, R. Latent variable multivariate regression modeling. Chemometr. Intellig. Lab. Syst. 48, 167-180 (1999).
-
(1999)
Chemometr. Intellig. Lab. Syst.
, vol.48
, pp. 167-180
-
-
Burnham, A.J.1
Mac Gregor, J.F.2
Viveros, R.3
-
32
-
-
0000669504
-
The efcient cross-validation of principal components applied to principal component regression
-
Mertens, B.,Fearn, T. & Thompson, M. The efcient cross-validation of principal components applied to principal component regression. Stat. Comput. 5, 227-235 (1995).
-
(1995)
Stat. Comput.
, vol.5
, pp. 227-235
-
-
Mertens, B.1
Fearn, T.2
Thompson, M.3
-
33
-
-
0000174867
-
Model validation by permutation tests: Applications to variable selection
-
Lindgren, F.,Hansen, B.,Karcher, W.,Sjöström, M. & Eriksson, L. Model validation by permutation tests: applications to variable selection. J. Chemometr. 10, 521-532 (1998).
-
(1998)
J. Chemometr.
, vol.10
, pp. 521-532
-
-
Lindgren, F.1
Karcher, B.2
Sjöström, M.3
Eriksson, L.4
-
34
-
-
33846088138
-
HMDB: The Human Metabolome Database
-
Wishart, D.S. et al. HMDB: the Human Metabolome Database. Nucleic Acids Res. 35, D521-D526 (2007).
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Wishart, D.S.1
-
35
-
-
0033982936
-
Kyoto encyclopedia of genes and genomes
-
Kanehisa, M. & Goto, S. KEGG: Kyoto encyclopedia of genes and genomes. Nucleic Acids Res. 28, 27-30 (2000).
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 27-30
-
-
Kanehisa, M.1
Kegg, G.S.2
-
36
-
-
38549117301
-
The MetaCyc Database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases
-
Caspi, R. et al. The MetaCyc Database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases. Nucleic Acids Res. 36, D623-D631 (2008).
-
(2008)
Nucleic Acids Res.
, vol.36
-
-
Caspi, R.1
-
37
-
-
0034899628
-
Comparative biosynthetic pathway of androstenol and androgens
-
Dufort, I., Soucy, P., Lacoste, L. & Luu-The, V. Comparative biosynthetic pathway of androstenol and androgens. J. Steroid Biochem. Mol. Biol. 77, 223-227 (2001)
-
(2001)
J. Steroid Biochem. Mol. Biol.
, vol.77
, pp. 223-227
-
-
Dufort, I.1
Soucy, P.2
Lacoste, L.3
Luu-The, V.4
-
38
-
-
0242351679
-
Pharmacokinetic interaction between corticosteroids and tacrolimus after renal transplantation
-
Anglicheau, D. et al. Pharmacokinetic interaction between corticosteroids and tacrolimus after renal transplantation. Nephrol. Dial. Transplant. 18, 2409-2414 (2003).
-
(2003)
Nephrol. Dial. Transplant.
, vol.18
, pp. 2409-2414
-
-
Anglicheau, D.1
-
39
-
-
0010258751
-
Regulation of the CYP3a4 gene by hydrocortisone and xenobiotics: Role of the glucocorticoid and pregnane X receptors
-
El-Sankary, W., Plant, N.J., Gibson, G.G. & Moore, D.J. Regulation of the CYP3a4 gene by hydrocortisone and xenobiotics: role of the glucocorticoid and pregnane X receptors. Drug Metab. Dispos. 28, 493-496 (2000).
-
(2000)
Drug Metab. Dispos.
, vol.28
, pp. 493-496
-
-
El-Sankary, W.1
Plant, N.J.2
Gibson, G.G.3
Moore, D.J.4
-
40
-
-
0242558148
-
Increase in tacrolimus trough levels after steroid withdrawal
-
Van Duijnhoven, E.M., Boots, J.M., Christiaans, M.H., Stolk, L.M., Undre, N.A. & van Hoof, J.P. Increase in tacrolimus trough levels after steroid withdrawal. Transpl. Int. 16, 721-725 (2003).
-
(2003)
Transpl. Int.
, vol.16
, pp. 721-725
-
-
Van Duijnhoven, E.M.1
Boots, J.M.2
Christiaans, M.H.3
Stolk, L.M.4
Undre, N.A.5
Van Hoof, J.P.6
-
41
-
-
35348891430
-
Network-based classifcation of breast cancer metastasis
-
Chuang, H.Y., Lee, E., Liu, Y.T., Lee, D. & Ideker, T. Network-based classifcation of breast cancer metastasis. Mol. Syst. Biol. 3, 140 (2007).
-
(2007)
Mol. Syst. Biol.
, vol.3
, pp. 140
-
-
Chuang, H.Y.1
Lee, E.2
Liu, Y.T.3
Lee, D.4
Ideker, T.5
-
42
-
-
2442639095
-
Immunosuppressive and anti-infammatory efects of nicotine administered by patch in an animal model
-
Kalra, R., Singh, S.P., Pena-Philippides, J.C., Langley, R.J., Razani-Boroujerdi, S. & Sopori, M.L. Immunosuppressive and anti-infammatory efects of nicotine administered by patch in an animal model. Clin. Diagn. Lab. Immunol. 11, 563-568 (2004).
-
(2004)
Clin. Diagn. Lab. Immunol.
, vol.11
, pp. 563-568
-
-
Kalra, R.1
Singh, S.P.2
Pena-Philippides, J.C.3
Langley, R.J.4
Razani-Boroujerdi, S.5
Sopori, M.L.6
-
43
-
-
0029070029
-
Immunosuppressive efects of organic acids accumulating in patients with maple syrup urine disease
-
Wajner, M., Schlottfeldt, J.L., Ckless, K. & Wannmacher, C.M. Immunosuppressive efects of organic acids accumulating in patients with maple syrup urine disease. J. Inherit. Metab. Dis. 18, 165-168 (1995).
-
(1995)
J. Inherit. Metab. Dis.
, vol.18
, pp. 165-168
-
-
Wajner, M.1
Schlottfeldt, J.L.2
Ckless, K.3
Wannmacher, C.M.4
-
44
-
-
0032711971
-
Infuence of tacrolimus on bile acid and lipid composition in continuously drained bile using a rat model. Comparative study with cyclosporine
-
Mizuta, K., Kobayashi, E., Uchida, H., Fujimura, a., Kawarasaki, H. & Hashizume, K. Infuence of tacrolimus on bile acid and lipid composition in continuously drained bile using a rat model. Comparative study with cyclosporine. Transpl. Int. 12, 316-322 (1999).
-
(1999)
Transpl. Int.
, vol.12
, pp. 316-322
-
-
Mizuta, K.1
Kobayashi, E.2
Uchida, H.3
Fujimura, A.4
Kawarasaki, H.5
Hashizume, K.6
-
45
-
-
8244258020
-
Convenient chromatographic prepurifcation step before measurement of urinary cortisol by radioimmunoassay
-
Morineau, G. et al. Convenient chromatographic prepurifcation step before measurement of urinary cortisol by radioimmunoassay. Clin. Chem. 43, 786-793 (1997).
-
(1997)
Clin. Chem.
, vol.43
, pp. 786-793
-
-
Morineau, G.1
-
46
-
-
0021673154
-
Determination of phosphoethanolamine in urine or in the presence of high taurine concentrations
-
Gundlach, G., Käbisch, A., Voegeli, R., Pralle, H. & Hartenfels, S. Determination of phosphoethanolamine in urine or in the presence of high taurine concentrations. Anal. Biochem. 142, 511-514 (1984).
-
(1984)
Anal. Biochem.
, vol.142
, pp. 511-514
-
-
Gundlach, G.1
Käbisch, A.2
Voegeli, R.3
Pralle, H.4
Hartenfels, S.5
-
47
-
-
0014441033
-
Nucleosides in human urine I: Isolation and identifcation of N2-dimethylguanosine, 1-methylinosine, and N2-methylguanosine from normal human urine
-
Girish, B.,Chheda, A.M. & Grace, J.T. Jr. Nucleosides in human urine I: isolation and identifcation of N2-dimethylguanosine, 1-methylinosine, and N2-methylguanosine from normal human urine. J. Pharmaceut. Sci. 58, 75-78 (1968).
-
(1968)
J. Pharmaceut. Sci.
, vol.58
, pp. 75-78
-
-
Girish, B.1
Chheda, A.M.2
-
48
-
-
30444446654
-
Simultaneous determination of three isomeric metabolites of tacrolimus (FK506) in human whole blood and plasma using high performance liquid chromatography-tandem mass spectrometry
-
Chen, Y.L., Hirabayashi, H., Akhtar, S., Pelzer, M. & Kobayashi, M. Simultaneous determination of three isomeric metabolites of tacrolimus (FK506) in human whole blood and plasma using high performance liquid chromatography-tandem mass spectrometry. J. Chromatogr. B Analyt. Technol. Biomed. Life Sci. 830, 330-341 (2006).
-
(2006)
J. Chromatogr. B Analyt. Technol. Biomed. Life Sci.
, vol.830
, pp. 330-341
-
-
Chen, Y.L.1
Hirabayashi, H.2
Akhtar, S.3
Pelzer, M.4
Kobayashi, M.5
-
49
-
-
34548146614
-
Within-day reproducibility of an HPLC-MS-based method for metabonomic analysis: Application to human urine
-
Gika, H.G., Theodoridis, G.a., Wingate, J.E. & Wilson, I.D. Within-day reproducibility of an HPLC-MS-based method for metabonomic analysis: application to human urine. J. Proteome Res. 6, 3291-3303 (2007).
-
(2007)
J. Proteome Res.
, vol.6
, pp. 3291-3303
-
-
Gika, H.G.1
Theodoridis, G.A.2
Wingate, J.E.3
Wilson, I.D.4
|