-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z., Miller, W. & Lipman, D. J. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25, 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
34248346700
-
Genome sequences of three koi herpesvirus isolates representing the expanding distribution of an emerging disease threatening koi and common carp worldwide
-
Aoki, T., Hirono, I., Kurokawa, K., Fukuda, H., Nahary, R., Eldar, A., Davison, A. J., Waltzek, T. B., Bercovier, H. & Hedrick, R. P. (2007). Genome sequences of three koi herpesvirus isolates representing the expanding distribution of an emerging disease threatening koi and common carp worldwide. J Virol 81, 5058-5065.
-
(2007)
J Virol
, vol.81
, pp. 5058-5065
-
-
Aoki, T.1
Hirono, I.2
Kurokawa, K.3
Fukuda, H.4
Nahary, R.5
Eldar, A.6
Davison, A.J.7
Waltzek, T.B.8
Bercovier, H.9
Hedrick, R.P.10
-
3
-
-
38549164691
-
GenBank
-
Benson, D. A., Karsch-Mizrachi, I., Lipman, D. J., Ostell, J. & Wheeler, D. L. (2008). GenBank. Nucleic Acids Res 36, D25-D30.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Benson, D.A.1
Karsch-Mizrachi, I.2
Lipman, D.J.3
Ostell, J.4
Wheeler, D.L.5
-
4
-
-
0035875343
-
GeneMarkS: A self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions
-
Besemer, J., Lomsadze, A. & Borodovsky, M. (2001). GeneMarkS: a self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions. Nucleic Acids Res 29, 2607-2618.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 2607-2618
-
-
Besemer, J.1
Lomsadze, A.2
Borodovsky, M.3
-
5
-
-
0030341784
-
Experiment files and their application during large-scale sequencing projects
-
Bonfield, J. K. & Staden, R. (1996). Experiment files and their application during large-scale sequencing projects. DNA Seq 6, 109-117.
-
(1996)
DNA Seq
, vol.6
, pp. 109-117
-
-
Bonfield, J.K.1
Staden, R.2
-
6
-
-
0029592773
-
A new DNA sequence assembly program
-
Bonfield, J. K., Smith, K. & Staden, R. (1995). A new DNA sequence assembly program. Nucleic Acids Res 23, 4992-4999.
-
(1995)
Nucleic Acids Res
, vol.23
, pp. 4992-4999
-
-
Bonfield, J.K.1
Smith, K.2
Staden, R.3
-
7
-
-
0037043324
-
Isolation and molecular characterization of herpesvirus from cultured European eels Anguilla anguilla in Taiwan
-
Chang, P. H., Pan, Y. H., Wu, C. M., Kuo, S. T. & Chung, H. Y. (2002). Isolation and molecular characterization of herpesvirus from cultured European eels Anguilla anguilla in Taiwan. Dis Aquat Organ 50, 111-118.
-
(2002)
Dis Aquat Organ
, vol.50
, pp. 111-118
-
-
Chang, P.H.1
Pan, Y.H.2
Wu, C.M.3
Kuo, S.T.4
Chung, H.Y.5
-
8
-
-
0003102289
-
A cell line derived from Japanese eel (Anguilla japonica) kidney
-
Chen, S. N., Ueno, Y. & Kou, G. H. (1982). A cell line derived from Japanese eel (Anguilla japonica) kidney. Proc Natl Sci Counc Repub China B 6, 93-100.
-
(1982)
Proc Natl Sci Counc Repub China B
, vol.6
, pp. 93-100
-
-
Chen, S.N.1
Ueno, Y.2
Kou, G.H.3
-
9
-
-
0000768286
-
First isolation of herpesvirus of eel (Herpesvirus anguillae) in diseased European eel (Anguilla anguilla L.) in Europe
-
Davidse, A., Haenen, O. L. M., Dijkstra, S. G., van Nieuwstadt, A. P., van der Vorst, T. J. K., Wagenaar, F. & Wellenberg, G. J. (1999). First isolation of herpesvirus of eel (Herpesvirus anguillae) in diseased European eel (Anguilla anguilla L.) in Europe. Bull Eur Assoc Fish Pathol 19, 137-141.
-
(1999)
Bull Eur Assoc Fish Pathol
, vol.19
, pp. 137-141
-
-
Davidse, A.1
Haenen, O.L.M.2
Dijkstra, S.G.3
van Nieuwstadt, A.P.4
van der Vorst, T.J.K.5
Wagenaar, F.6
Wellenberg, G.J.7
-
10
-
-
0026570966
-
Channel catfish virus: A new type of herpesvirus
-
Davison, A. J. (1992). Channel catfish virus: a new type of herpesvirus. Virology 186, 9-14.
-
(1992)
Virology
, vol.186
, pp. 9-14
-
-
Davison, A.J.1
-
11
-
-
0031937428
-
The genome of salmonid herpesvirus 1
-
Davison, A. J. (1998). The genome of salmonid herpesvirus 1. J Virol 72, 1974-1982.
-
(1998)
J Virol
, vol.72
, pp. 1974-1982
-
-
Davison, A.J.1
-
12
-
-
0037156236
-
Evolution of the herpesviruses
-
Davison, A. J. (2002). Evolution of the herpesviruses. Vet Microbiol 86, 69-88.
-
(2002)
Vet Microbiol
, vol.86
, pp. 69-88
-
-
Davison, A.J.1
-
13
-
-
0037236731
-
The human cytomegalovirus genome revisited: Comparison with the chimpanzee cytomegalovirus genome
-
Davison, A. J., Dolan, A., Akter, P., Addison, C., Dargan, D. J., Alcendor, D. J., McGeoch, D. J. & Hayward, G. S. (2003). The human cytomegalovirus genome revisited: comparison with the chimpanzee cytomegalovirus genome. J Gen Virol 84, 17-28.
-
(2003)
J Gen Virol
, vol.84
, pp. 17-28
-
-
Davison, A.J.1
Dolan, A.2
Akter, P.3
Addison, C.4
Dargan, D.J.5
Alcendor, D.J.6
McGeoch, D.J.7
Hayward, G.S.8
-
14
-
-
77949502935
-
-
Davison, A. J., Eberle, R., Hayward, G. S., McGeoch, D. J., Minson, A. C., Pellet, P. E., Roizman, B., Studdert, M. J. & Thiry, E. (2005). Herpesviridae. In Virus Taxonomy: VIIIth Report of the International Committee on Taxonomy of Viruses, pp. 193-212. Edited by C. M. Fauquet, M. A. Mayo, J. Maniloff, U. Desselberger & L. A. Ball. Amsterdam: Elsevier Academic Press.
-
Davison, A. J., Eberle, R., Hayward, G. S., McGeoch, D. J., Minson, A. C., Pellet, P. E., Roizman, B., Studdert, M. J. & Thiry, E. (2005). Herpesviridae. In Virus Taxonomy: VIIIth Report of the International Committee on Taxonomy of Viruses, pp. 193-212. Edited by C. M. Fauquet, M. A. Mayo, J. Maniloff, U. Desselberger & L. A. Ball. Amsterdam: Elsevier Academic Press.
-
-
-
-
15
-
-
33751396692
-
Genome sequences of two frog herpesviruses
-
Davison, A. J., Cunningham, C., Sauerbier, W. & McKinnell, R. G. (2006). Genome sequences of two frog herpesviruses. J Gen Virol 87, 3509-3514.
-
(2006)
J Gen Virol
, vol.87
, pp. 3509-3514
-
-
Davison, A.J.1
Cunningham, C.2
Sauerbier, W.3
McKinnell, R.G.4
-
16
-
-
58149308301
-
The order Herpesvirales
-
Davison, A. J., Eberle, R., Ehlers, B., Hayward, G. S., McGeoch, D. J., Minson, A. C., Pellett, P. E., Roizman, B., Studdert, M. J. & Thiry, E. (2009). The order Herpesvirales. Arch Virol 154, 171-177.
-
(2009)
Arch Virol
, vol.154
, pp. 171-177
-
-
Davison, A.J.1
Eberle, R.2
Ehlers, B.3
Hayward, G.S.4
McGeoch, D.J.5
Minson, A.C.6
Pellett, P.E.7
Roizman, B.8
Studdert, M.J.9
Thiry, E.10
-
17
-
-
55949107824
-
Molecular confirmation of a new herpesvirus from catfish (Ameiurus melas) by testing the performance of a novel PCR method, designed to target the DNA polymerase gene of alloherpesviruses
-
Doszpoly, A., Kovacs, E. R., Bovo, G., LaPatra, S. E., Harrach, B. & Benko, M. (2008). Molecular confirmation of a new herpesvirus from catfish (Ameiurus melas) by testing the performance of a novel PCR method, designed to target the DNA polymerase gene of alloherpesviruses. Arch Virol 153, 2123-2127.
-
(2008)
Arch Virol
, vol.153
, pp. 2123-2127
-
-
Doszpoly, A.1
Kovacs, E.R.2
Bovo, G.3
LaPatra, S.E.4
Harrach, B.5
Benko, M.6
-
18
-
-
0031978181
-
Base-calling of automated sequencer traces using phred. II. Error probabilities
-
Ewing, B. & Green, P. (1998). Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Res 8, 186-194.
-
(1998)
Genome Res
, vol.8
, pp. 186-194
-
-
Ewing, B.1
Green, P.2
-
19
-
-
0031955518
-
Base-calling of automated sequencer traces using phred. I. Accuracy assessment
-
Ewing, B., Hillier, L., Wendl, M. C. & Green, P. (1998). Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res 8, 175-185.
-
(1998)
Genome Res
, vol.8
, pp. 175-185
-
-
Ewing, B.1
Hillier, L.2
Wendl, M.C.3
Green, P.4
-
20
-
-
77949523620
-
-
Felsenstein, J, 2008, PHYLIP phylogeny inference package, version 3.68. Seattle: Department of Genome Sciences and Department of Biology, University of Washington
-
Felsenstein, J. (2008). PHYLIP (phylogeny inference package), version 3.68. Seattle: Department of Genome Sciences and Department of Biology, University of Washington.
-
-
-
-
21
-
-
0041618706
-
Herpesvirus anguillae (HVA) isolations from disease outbreaks in cultured European eel, Anguilla anguilla in the Netherlands since 1996
-
Haenen, O. L. M., Dijkstra, S. G., Tulden, P. W., Davidse, A., van Nieuwstadt, A. P., Wagenaar, F. & Wellenberg, G. J. (2002). Herpesvirus anguillae (HVA) isolations from disease outbreaks in cultured European eel, Anguilla anguilla in the Netherlands since 1996. Bull Eur Assoc Fish Pathol 22, 247-257.
-
(2002)
Bull Eur Assoc Fish Pathol
, vol.22
, pp. 247-257
-
-
Haenen, O.L.M.1
Dijkstra, S.G.2
Tulden, P.W.3
Davidse, A.4
van Nieuwstadt, A.P.5
Wagenaar, F.6
Wellenberg, G.J.7
-
22
-
-
66149096680
-
Monitoring of Herpesvirus anguillae (HVA) infections in European eel, Anguilla anguilla (L.), in northern Germany
-
Jakob, E., Neuhaus, H., Steinhagen, D., Luckhardt, B. & Hanel, R. (2009). Monitoring of Herpesvirus anguillae (HVA) infections in European eel, Anguilla anguilla (L.), in northern Germany. J Fish Dis 32, 557-561.
-
(2009)
J Fish Dis
, vol.32
, pp. 557-561
-
-
Jakob, E.1
Neuhaus, H.2
Steinhagen, D.3
Luckhardt, B.4
Hanel, R.5
-
23
-
-
0031479702
-
Characterization and pathogenicity of a herpesvirus isolated from cutaneous lesions in Japanese eel, Anguilla japonica
-
Kobayashi, T. & Miyazaki, T. (1997). Characterization and pathogenicity of a herpesvirus isolated from cutaneous lesions in Japanese eel, Anguilla japonica. Fish Pathol (Japan) 32, 89-95.
-
(1997)
Fish Pathol (Japan)
, vol.32
, pp. 89-95
-
-
Kobayashi, T.1
Miyazaki, T.2
-
24
-
-
0033378382
-
Gill filament necrosis in farmed Japanese eels, Anguilla japonica (Temminck & Schlegel), infected with Herpesvirus anguillae
-
Lee, N.-S., Kobayashi, J. & Miyazaki, T. (1999). Gill filament necrosis in farmed Japanese eels, Anguilla japonica (Temminck & Schlegel), infected with Herpesvirus anguillae. J Fish Dis 22, 457-463.
-
(1999)
J Fish Dis
, vol.22
, pp. 457-463
-
-
Lee, N.-S.1
Kobayashi, J.2
Miyazaki, T.3
-
25
-
-
0003145677
-
The molecular evolutionary history of the herpesviruses
-
Edited by E. Domingo, R. Webster & J. Holland. London: Academic Press
-
McGeoch, D. J. & Davison, A. (1999). The molecular evolutionary history of the herpesviruses. In Origin and Evolution of Viruses, pp. 441-465. Edited by E. Domingo, R. Webster & J. Holland. London: Academic Press.
-
(1999)
Origin and Evolution of Viruses
, pp. 441-465
-
-
McGeoch, D.J.1
Davison, A.2
-
26
-
-
33645054794
-
Topics in herpesvirus genomics and evolution
-
McGeoch, D. J., Rixon, F. J. & Davison, A. J. (2006). Topics in herpesvirus genomics and evolution. Virus Res 117, 90-104.
-
(2006)
Virus Res
, vol.117
, pp. 90-104
-
-
McGeoch, D.J.1
Rixon, F.J.2
Davison, A.J.3
-
27
-
-
0030203863
-
TreeView: An application to display phylogenetic trees on personal computers
-
Page, R. D. M. (1996). TreeView: an application to display phylogenetic trees on personal computers. Comput Appl Biosci 12, 357-358.
-
(1996)
Comput Appl Biosci
, vol.12
, pp. 357-358
-
-
Page, R.D.M.1
-
28
-
-
12344303192
-
Development of a polymerase chain reaction for the detection of Anguillid herpesvirus DNA in eels based on the herpesvirus DNA polymerase gene
-
Rijsewijk, F., Pritz-Verschuren, S., Kerkhoff, S., Botter, A., Willemsen, M., van Nieuwstadt, T. & Haenen, O. (2005). Development of a polymerase chain reaction for the detection of Anguillid herpesvirus DNA in eels based on the herpesvirus DNA polymerase gene. J Virol Methods 124, 87-94.
-
(2005)
J Virol Methods
, vol.124
, pp. 87-94
-
-
Rijsewijk, F.1
Pritz-Verschuren, S.2
Kerkhoff, S.3
Botter, A.4
Willemsen, M.5
van Nieuwstadt, T.6
Haenen, O.7
-
29
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
Ronquist, F. & Huelsenbeck, J. P. (2003). MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19, 1572-1574.
-
(2003)
Bioinformatics
, vol.19
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
30
-
-
0037887033
-
Isolation and characterization of a new herpesvirus from eel
-
1st edn, pp, Edited by F. O. Perkins & T. C. Cheng. San Diego: Academic Press
-
Sano, M., Fukuda, H. & Sano, T. (1990). Isolation and characterization of a new herpesvirus from eel. In Pathology in Marine Sciences, 1st edn, pp. 15-31. Edited by F. O. Perkins & T. C. Cheng. San Diego: Academic Press.
-
(1990)
Pathology in Marine Sciences
, pp. 15-31
-
-
Sano, M.1
Fukuda, H.2
Sano, T.3
-
31
-
-
34547781750
-
-
Tamura, K, Dudley, J, Nei, M. & Kumar, S, 2007, MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599
-
Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007). MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599.
-
-
-
-
32
-
-
0031574072
-
The CLUSTAL-X Windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL-X Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
33
-
-
0002979233
-
Characterization of a herpes-like virus isolated from cultured Japanese eels in Taiwan
-
Ueno, Y., Kitao, T., Chen, S.-N., Aoki, T. & Kou, G.-H. (1992). Characterization of a herpes-like virus isolated from cultured Japanese eels in Taiwan. Fish Pathol (Japan) 27, 7-17.
-
(1992)
Fish Pathol (Japan)
, vol.27
, pp. 7-17
-
-
Ueno, Y.1
Kitao, T.2
Chen, S.-N.3
Aoki, T.4
Kou, G.-H.5
-
34
-
-
0008555769
-
Biological and serological comparisons of eel herpesvirus in Formosa (EHVF) and Herpesvirus anguillae (HVA)
-
Ueno, Y., Shi, J.-W., Yoshida, T., Kitao, T., Sakai, M., Chen, S.-N. & Kou, G. H. (1996). Biological and serological comparisons of eel herpesvirus in Formosa (EHVF) and Herpesvirus anguillae (HVA). J Appl Ichthyol 12, 49-51.
-
(1996)
J Appl Ichthyol
, vol.12
, pp. 49-51
-
-
Ueno, Y.1
Shi, J.-W.2
Yoshida, T.3
Kitao, T.4
Sakai, M.5
Chen, S.-N.6
Kou, G.H.7
-
35
-
-
9644266908
-
Presence of eel viruses in eel species from various geographic regions
-
van Ginneken, V., Haenen, O., Coldenhoff, K., Willemze, R., Antonissen, E., van Tulden, P., Dijkstra, S., Wagenaar, F. & van den Thillart, G. (2004). Presence of eel viruses in eel species from various geographic regions. Bull Eur Assoc Fish Pathol 24, 268-271.
-
(2004)
Bull Eur Assoc Fish Pathol
, vol.24
, pp. 268-271
-
-
van Ginneken, V.1
Haenen, O.2
Coldenhoff, K.3
Willemze, R.4
Antonissen, E.5
van Tulden, P.6
Dijkstra, S.7
Wagenaar, F.8
van den Thillart, G.9
-
36
-
-
0035918877
-
Persistence of herpesvirus of eel Herpesvirus anguillae in farmed European eel Anguilla anguilla
-
van Nieuwstadt, A. P., Dijkstra, S. G. & Haenen, O. L. (2001). Persistence of herpesvirus of eel Herpesvirus anguillae in farmed European eel Anguilla anguilla. Dis Aquat Organ 45, 103-107.
-
(2001)
Dis Aquat Organ
, vol.45
, pp. 103-107
-
-
van Nieuwstadt, A.P.1
Dijkstra, S.G.2
Haenen, O.L.3
-
37
-
-
20044393316
-
Koi herpesvirus represents a third cyprinid herpesvirus (CyHV-3) in the family Herpesviridae
-
Waltzek, T. B., Kelley, G. O., Stone, D. M., Way, K., Hanson, L., Fukuda, H., Hirono, I., Aoki, T., Davison, A. J. & Hedrick, R. P. (2005). Koi herpesvirus represents a third cyprinid herpesvirus (CyHV-3) in the family Herpesviridae. J Gen Virol 86, 1659-1667.
-
(2005)
J Gen Virol
, vol.86
, pp. 1659-1667
-
-
Waltzek, T.B.1
Kelley, G.O.2
Stone, D.M.3
Way, K.4
Hanson, L.5
Fukuda, H.6
Hirono, I.7
Aoki, T.8
Davison, A.J.9
Hedrick, R.P.10
-
38
-
-
63449140053
-
Phylogenetic relationships in the family Alloherpesviridae
-
Waltzek, T. B., Kelley, G. O., Alfaro, M. E., Kurobe, T., Davison, A. J. & Hedrick, R. P. (2009). Phylogenetic relationships in the family Alloherpesviridae. Dis Aquat Organ 84, 179-194.
-
(2009)
Dis Aquat Organ
, vol.84
, pp. 179-194
-
-
Waltzek, T.B.1
Kelley, G.O.2
Alfaro, M.E.3
Kurobe, T.4
Davison, A.J.5
Hedrick, R.P.6
|