메뉴 건너뛰기




Volumn 26, Issue 3, 2008, Pages 156-173

Potentiality of methylation-sensitive amplification polymorphism (MSAP) in identifying genes involved in tomato response to tomato yellow leaf curl Sardinia virus

Author keywords

MSAP; Resistance genes; RT qPCR; Solanum lycopersicum; TYLCSV

Indexed keywords

BACTERIA (MICROORGANISMS); BEMISIA TABACI; FUNGI; GEMINIVIRIDAE; LYCOPERSICON ESCULENTUM; NEMATODA; SOLANUM; TOMATO YELLOW LEAF CURL SARDINIA VIRUS;

EID: 48849116261     PISSN: 07359640     EISSN: 15729818     Source Type: Journal    
DOI: 10.1007/s11105-008-0031-x     Document Type: Article
Times cited : (47)

References (48)
  • 2
    • 0030875132 scopus 로고    scopus 로고
    • RRB1 and RRB2 encode maize retinoblastoma-related proteins that interact with a plant D-type cyclin and a geminivirus replication protein
    • RA Ach T Durfee AB Miller P Taranto L Hanley-Bowdoin PC Zambriski 1997 RRB1 and RRB2 encode maize retinoblastoma-related proteins that interact with a plant D-type cyclin and a geminivirus replication protein Mol Cell Biol 17 5077 5086
    • (1997) Mol Cell Biol , vol.17 , pp. 5077-5086
    • Ach, R.A.1    Durfee, T.2    Miller, A.B.3    Taranto, P.4    Hanley-Bowdoin, L.5    Zambriski, P.C.6
  • 5
    • 0035117367 scopus 로고    scopus 로고
    • Surveying CpG methylation at 5′-CCGG in the genomes of rice cultivars
    • 1
    • I Ashikawa 2001 Surveying CpG methylation at 5′-CCGG in the genomes of rice cultivars Plant Mol Biol 45 1 31 39
    • (2001) Plant Mol Biol , vol.45 , pp. 31-39
    • Ashikawa, I.1
  • 7
    • 0025835296 scopus 로고
    • Fast and sensitive silver staining of DNA in polyacrylamide gels
    • 1
    • BJ Bassam G Caetano-Anolles PM Gresshoff 1991 Fast and sensitive silver staining of DNA in polyacrylamide gels Anal Biochem 196 1 80 83
    • (1991) Anal Biochem , vol.196 , pp. 80-83
    • Bassam, B.J.1    Caetano-Anolles, G.2    Gresshoff, P.M.3
  • 9
    • 6944244957 scopus 로고    scopus 로고
    • The EBV lytic switch protein, Z, preferentially binds to and activates the methylated viral genome
    • 10
    • PM Bhende WT Seaman HJ Delecluse SC Kenney 2004 The EBV lytic switch protein, Z, preferentially binds to and activates the methylated viral genome Nat Genet 36 10 1099 1104
    • (2004) Nat Genet , vol.36 , pp. 1099-1104
    • Bhende, P.M.1    Seaman, W.T.2    Delecluse, H.J.3    Kenney, S.C.4
  • 11
    • 0028001711 scopus 로고
    • Inhibition of human T cell leukaemia virus type I long terminal repeat expression by DNA methylation: Implications for latency
    • 11
    • S Cassens U Ulrich P Beimling D Simon 1994 Inhibition of human T cell leukaemia virus type I long terminal repeat expression by DNA methylation: implications for latency J Gen Virol 75 11 3255 3259
    • (1994) J Gen Virol , vol.75 , pp. 3255-3259
    • Cassens, S.1    Ulrich, U.2    Beimling, P.3    Simon, D.4
  • 12
    • 0343844461 scopus 로고    scopus 로고
    • The two nonstructural proteins from wheat dwarf virus involved in viral gene expression and replication are retinoblastoma-binding proteins
    • 1
    • S Collin M Fernandez-Lobato PS Gooding PM Mullineaux C Fenoll 1996 The two nonstructural proteins from wheat dwarf virus involved in viral gene expression and replication are retinoblastoma-binding proteins Virology 219 1 324 329
    • (1996) Virology , vol.219 , pp. 324-329
    • Collin, S.1    Fernandez-Lobato, M.2    Gooding, P.S.3    Mullineaux, P.M.4    Fenoll, C.5
  • 13
    • 0032205839 scopus 로고    scopus 로고
    • The tomato Cf-5 disease resistance gene and six homologs show pronounced allelic variation in leucine-rich repeat copy number
    • MS Dixon K Hatzixanthis DA Jones K Harrison JDG Jones 1998 The tomato Cf-5 disease resistance gene and six homologs show pronounced allelic variation in leucine-rich repeat copy number Plant Cell 10 1915 1925
    • (1998) Plant Cell , vol.10 , pp. 1915-1925
    • Dixon, M.S.1    Hatzixanthis, K.2    Jones, D.A.3    Harrison, K.4    Jones, J.D.G.5
  • 14
    • 0002594984 scopus 로고
    • A rapid DNA isolation procedure for small quantities of fresh leaf tissue
    • JJ Doyle JL Doyle 1987 A rapid DNA isolation procedure for small quantities of fresh leaf tissue Phytochem Bull 19 11 15
    • (1987) Phytochem Bull , vol.19 , pp. 11-15
    • Doyle, J.J.1    Doyle, J.L.2
  • 15
    • 0030087809 scopus 로고    scopus 로고
    • Isolation and analysis of cDNAs encoding tomato cysteine proteases expressed during leaf senescence
    • 4
    • R Drake I John A Farrell W Cooper W Schuch D Grierson 1996 Isolation and analysis of cDNAs encoding tomato cysteine proteases expressed during leaf senescence Plant Mol Biol 30 4 755 767
    • (1996) Plant Mol Biol , vol.30 , pp. 755-767
    • Drake, R.1    John, I.2    Farrell, A.3    Cooper, W.4    Schuch, W.5    Grierson, D.6
  • 16
    • 0038505659 scopus 로고    scopus 로고
    • Alterations of RB1, p53 and Wnt pathways in hepatocellular carcinomas associated with hepatitis C, hepatitis B and alcoholic liver cirrhosis
    • 3
    • Y Edamoto A Hara W Biernat L Terracciano G Cathomas HM Riehle 2003 Alterations of RB1, p53 and Wnt pathways in hepatocellular carcinomas associated with hepatitis C, hepatitis B and alcoholic liver cirrhosis Int J Cancer 106 3 334 341
    • (2003) Int J Cancer , vol.106 , pp. 334-341
    • Edamoto, Y.1    Hara, A.2    Biernat, W.3    Terracciano, L.4    Cathomas, G.5    Riehle, H.M.6
  • 17
    • 0024458683 scopus 로고
    • The role of methylation in the phenotype-dependent modulation of Epstein-Barr nuclear antigen 2 and latent membrane protein genes in cells latently infected with Epstein-Barr virus
    • I Ernberg K Falk J Minarovits P Busson T Tursz MG Masucci 1989 The role of methylation in the phenotype-dependent modulation of Epstein-Barr nuclear antigen 2 and latent membrane protein genes in cells latently infected with Epstein-Barr virus J Gen Virol 70 2989 3002
    • (1989) J Gen Virol , vol.70 , pp. 2989-3002
    • Ernberg, I.1    Falk, K.2    Minarovits, J.3    Busson, P.4    Tursz, T.5    Masucci, M.G.6
  • 18
    • 0034812726 scopus 로고    scopus 로고
    • Infection of lymphoid cells by integration-defective human immunodeficiency virus type 1 increases de novo methylation
    • 20
    • JY Fang JA Mikovits R Bagni CL Petrow-Sadowski FW Ruscetti 2001 Infection of lymphoid cells by integration-defective human immunodeficiency virus type 1 increases de novo methylation J Virol 75 20 9753 9761
    • (2001) J Virol , vol.75 , pp. 9753-9761
    • Fang, J.Y.1    Mikovits, J.A.2    Bagni, R.3    Petrow-Sadowski, C.L.4    Ruscetti, F.W.5
  • 19
    • 3042725243 scopus 로고    scopus 로고
    • Regulation of disease resistance pathways by AP2/ERF transcription factors
    • 4
    • N Gutterson TL Reuber 2004 Regulation of disease resistance pathways by AP2/ERF transcription factors Curr Opin Plant Biol 7 4 465 471
    • (2004) Curr Opin Plant Biol , vol.7 , pp. 465-471
    • Gutterson, N.1    Reuber, T.L.2
  • 21
    • 0032918558 scopus 로고    scopus 로고
    • Plant cis-acting regulatory DNA elements (PLACE) database: 1999
    • 1
    • K Higo Y Ugawa M Iwamoto T Korenaga 1999 Plant cis-acting regulatory DNA elements (PLACE) database: 1999 Nucleic Acids Res 27 1 297 300
    • (1999) Nucleic Acids Res , vol.27 , pp. 297-300
    • Higo, K.1    Ugawa, Y.2    Iwamoto, M.3    Korenaga, T.4
  • 23
    • 0035873992 scopus 로고    scopus 로고
    • RNA-directed transcriptional gene silencing in plants can be inherited independently of the RNA trigger and requires Met1 for maintenance
    • 10
    • L Jones F Ratcliff DC Baulcombe 2001 RNA-directed transcriptional gene silencing in plants can be inherited independently of the RNA trigger and requires Met1 for maintenance Curr Biol 11 10 747 757
    • (2001) Curr Biol , vol.11 , pp. 747-757
    • Jones, L.1    Ratcliff, F.2    Baulcombe, D.C.3
  • 26
    • 0034476827 scopus 로고    scopus 로고
    • Caspase-like protease involvement in the control of plant cell death
    • E Lam O del Pozo 2000 Caspase-like protease involvement in the control of plant cell death Plant Mol Biol 44 417 428
    • (2000) Plant Mol Biol , vol.44 , pp. 417-428
    • Lam, E.1    Del Pozo, O.2
  • 27
    • 24344465856 scopus 로고    scopus 로고
    • Epigenetic changes in virus-associated human cancers
    • 4
    • HP Li YW Leu YS Chang 2005 Epigenetic changes in virus-associated human cancers Cell Res 15 4 262 271
    • (2005) Cell Res , vol.15 , pp. 262-271
    • Li, H.P.1    Leu, Y.W.2    Chang, Y.S.3
  • 28
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method
    • 4
    • KJ Livak TD Schmittgen 2001 Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method Methods 25 4 402 408
    • (2001) Methods , vol.25 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 29
    • 0034700174 scopus 로고    scopus 로고
    • Virus encoded suppressor of post-transcriptional gene silencing targets a maintenance step in silencing pathway
    • C Llave KD Kasschau JC Carrington 2000 Virus encoded suppressor of post-transcriptional gene silencing targets a maintenance step in silencing pathway Proc Natl Acad Sci USA 97 13401 13406
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 13401-13406
    • Llave, C.1    Kasschau, K.D.2    Carrington, J.C.3
  • 30
    • 0037942759 scopus 로고    scopus 로고
    • Rep-protein-mediated resistance to homologous and heterologous geminiviruses occurs by two distinct mechanisms while viruses overcome these by silencing the transgene
    • 12
    • A Lucioli E Noris A Brunetti R Tavazza V Ruzza AG Castello 2003 Rep-protein-mediated resistance to homologous and heterologous geminiviruses occurs by two distinct mechanisms while viruses overcome these by silencing the transgene J Virol 77 12 6785 6798
    • (2003) J Virol , vol.77 , pp. 6785-6798
    • Lucioli, A.1    Noris, E.2    Brunetti, A.3    Tavazza, R.4    Ruzza, V.5    Castello, A.G.6
  • 31
    • 0034965348 scopus 로고    scopus 로고
    • Variation in oil palm (Elaeis guineensis Jacq.) tissue culture-derived regenerants revealed by AFLPs with methylation-sensitive enzymes
    • M Matthes R Singh SC Cheah A Karp 2001 Variation in oil palm (Elaeis guineensis Jacq.) tissue culture-derived regenerants revealed by AFLPs with methylation-sensitive enzymes Theor Appl Genet 102 971 979
    • (2001) Theor Appl Genet , vol.102 , pp. 971-979
    • Matthes, M.1    Singh, R.2    Cheah, S.C.3    Karp, A.4
  • 32
    • 0034901448 scopus 로고    scopus 로고
    • Detection of DNA methylation changes in micropropagated banana plants using methylation-sensitive amplification polymorphism (MSAP)
    • S Peraza-Echeverria VA Herrera-Valencia A James-Kay 2001 Detection of DNA methylation changes in micropropagated banana plants using methylation- sensitive amplification polymorphism (MSAP) Plant Sci 161 359 367
    • (2001) Plant Sci , vol.161 , pp. 359-367
    • Peraza-Echeverria, S.1    Herrera-Valencia, V.A.2    James-Kay, A.3
  • 33
    • 1642444913 scopus 로고    scopus 로고
    • Analysis of DNA methylation during germination of pepper (Capsicum annuum L.) seeds using methylation-sensitive amplification polymorphism (MSAP)
    • 1
    • E Portis A Acquadro C Comino S Lanteri 2004 Analysis of DNA methylation during germination of pepper (Capsicum annuum L.) seeds using methylation-sensitive amplification polymorphism (MSAP) Plant Sci 166 1 169 178
    • (2004) Plant Sci , vol.166 , pp. 169-178
    • Portis, E.1    Acquadro, A.2    Comino, C.3    Lanteri, S.4
  • 35
    • 0030889065 scopus 로고    scopus 로고
    • Differences in DNA methylation pattern are detectable during the dimorphic transition of fungi by amplification of restriction polymorphisms
    • GE Reyna-López J Simpson J Ruiz-Herrera 1997 Differences in DNA methylation pattern are detectable during the dimorphic transition of fungi by amplification of restriction polymorphisms Mol Gen Genet 253 703 710
    • (1997) Mol Gen Genet , vol.253 , pp. 703-710
    • Reyna-López, G.E.1    Simpson, J.2    Ruiz-Herrera, J.3
  • 36
    • 0034305821 scopus 로고    scopus 로고
    • DNA methylation in health and disease
    • KD Robertson AP Wolffe 2000 DNA methylation in health and disease Nat Rev Genet 1 11 19
    • (2000) Nat Rev Genet , vol.1 , pp. 11-19
    • Robertson, K.D.1    Wolffe, A.P.2
  • 38
    • 0242668847 scopus 로고    scopus 로고
    • Transcriptional silencing of geminiviral promoter-driven transgenes following homologous virus infection
    • 5
    • M Seemanpillai I Dry J Randles A Rezaian 2003 Transcriptional silencing of geminiviral promoter-driven transgenes following homologous virus infection Mol Plant-Microbe Interact 16 5 429 438
    • (2003) Mol Plant-Microbe Interact , vol.16 , pp. 429-438
    • Seemanpillai, M.1    Dry, I.2    Randles, J.3    Rezaian, A.4
  • 39
    • 23044500268 scopus 로고    scopus 로고
    • Analysis of DNA methylation related to rice adult plant resistance to bacterial blight based on methylation-sensitive AFLP (MSAP) analysis
    • 6
    • AH Sha XH Lin JB Huang DP Zhang 2005 Analysis of DNA methylation related to rice adult plant resistance to bacterial blight based on methylation- sensitive AFLP (MSAP) analysis Mol Genet Genomics 273 6 484 490
    • (2005) Mol Genet Genomics , vol.273 , pp. 484-490
    • Sha, A.H.1    Lin, X.H.2    Huang, J.B.3    Zhang, D.P.4
  • 40
    • 0036009436 scopus 로고    scopus 로고
    • Vernalization-induced changes in the methylation pattern of winter wheat
    • JD Sherman LE Talbert 2002 Vernalization-induced changes in the methylation pattern of winter wheat Genome 45 253 260
    • (2002) Genome , vol.45 , pp. 253-260
    • Sherman, J.D.1    Talbert, L.E.2
  • 41
    • 0037668904 scopus 로고    scopus 로고
    • Survey of Bemisia tabaci (Hemiptera: Aleyrodidae) biotypes in Italy with the description of a new biotype (T) from Euphorbia characias
    • 3
    • B Simon JL Cenis S Demichelis C Rapisarda P Caciagli D Bosco 2003 Survey of Bemisia tabaci (Hemiptera: Aleyrodidae) biotypes in Italy with the description of a new biotype (T) from Euphorbia characias Bull Entomol Res 93 3 259 264
    • (2003) Bull Entomol Res , vol.93 , pp. 259-264
    • Simon, B.1    Cenis, J.L.2    Demichelis, S.3    Rapisarda, C.4    Caciagli, P.5    Bosco, D.6
  • 42
    • 0037462790 scopus 로고    scopus 로고
    • Latent HIV-1 reactivation in transgenic mice requires cell cycle -dependent demethylation of CREB/ATF sites in the LTR
    • 2
    • J Tanaka T Ishida BI Choi J Yasuda T Watanabe Y Iwakura 2003 Latent HIV-1 reactivation in transgenic mice requires cell cycle -dependent demethylation of CREB/ATF sites in the LTR AIDS 17 2 167 175
    • (2003) AIDS , vol.17 , pp. 167-175
    • Tanaka, J.1    Ishida, T.2    Choi, B.I.3    Yasuda, J.4    Watanabe, T.5    Iwakura, Y.6
  • 43
    • 14344252157 scopus 로고    scopus 로고
    • Induction and suppression of RNA silencing: Insights from viral infections
    • O Voinnet 2005 Induction and suppression of RNA silencing: insights from viral infections Nat Rev Genet 6 206 220
    • (2005) Nat Rev Genet , vol.6 , pp. 206-220
    • Voinnet, O.1
  • 45
    • 0035859046 scopus 로고    scopus 로고
    • Gene silencing as an adaptive defence against viruses
    • PM Waterhouse MB Wang T Lough 2001 Gene silencing as an adaptive defence against viruses Nature 411 834 842
    • (2001) Nature , vol.411 , pp. 834-842
    • Waterhouse, P.M.1    Wang, M.B.2    Lough, T.3
  • 46
    • 0029124903 scopus 로고
    • Identification and analysis of a retinoblastoma binding motif in the replication protein of a plant DNA virus: Requirement for efficient viral DNA replication
    • 16
    • Q Xie P Suarez-Lopez C Gutierrez 1995 Identification and analysis of a retinoblastoma binding motif in the replication protein of a plant DNA virus: requirement for efficient viral DNA replication EMBO J 14 16 4073 4082
    • (1995) EMBO J , vol.14 , pp. 4073-4082
    • Xie, Q.1    Suarez-Lopez, P.2    Gutierrez, C.3
  • 47
    • 0033005346 scopus 로고    scopus 로고
    • Patterns of cytosine methylation in an elite rice hybrid and its parental lines, detected by a methylation-sensitive amplification polymorphism technique
    • LZ Xiong CG Xu S Maroof G Zhang 1999 Patterns of cytosine methylation in an elite rice hybrid and its parental lines, detected by a methylation-sensitive amplification polymorphism technique Mol Gen Genet 261 439 446
    • (1999) Mol Gen Genet , vol.261 , pp. 439-446
    • Xiong, L.Z.1    Xu, C.G.2    Maroof, S.3    Zhang, G.4
  • 48


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.