Polymorphism of chicken myocyte-specific enhancer-binding factor 2A gene and its association with chicken carcass traits

Molecular Biology Reports

Volumn 37, Issue 1, 2010, Pages 587-594

  Zhou, Yan ^a,b   Liu, Yiping ^a   Jiang, Xiaosong ^c   Du, Huarui ^d   Li, Xiaocheng ^d   Zhu, Qing ^a  

^a SICHUAN AGRICULTURAL UNIVERSITY   (China)

^b Academy of Agricultural Science   (China)

^c SICHUAN ANIMAL SCIENCE ACADEMY   (China)

^d Sichuan Dahen Poultry Breeding Company   (China)

Author keywords

Carcass traits; Chicken; Haplotype; Myocyte specific enhancer binding factor 2A gene; Polymorphism

Indexed keywords

MYOCYTE ENHANCER BINDING FACTOR 2A; MYOCYTE ENHANCER FACTOR 2; UNCLASSIFIED DRUG;

ANIMAL EXPERIMENT; ANIMAL MODEL; ARTICLE; BODY WEIGHT; CARCASS; CHICKEN; EVISCERATION; GENE AMPLIFICATION; GENE FREQUENCY; GENETIC ASSOCIATION; GENETIC TRAIT; GENOTYPE; HAPLOTYPE; LEG MUSCLE; MUSCLE MASS; NONHUMAN; QUANTITATIVE TRAIT LOCUS; SINGLE NUCLEOTIDE POLYMORPHISM;

ALLELES; ANIMALS; CHICKENS; GENE FREQUENCY; HAPLOTYPES; MEAT; MYOGENIC REGULATORY FACTORS; POLYMORPHISM, SINGLE NUCLEOTIDE; QUANTITATIVE TRAIT, HERITABLE;

GALLUS GALLUS; VERTEBRATA;

EID: 77949275193     PISSN: 03014851     EISSN: 15734978     Source Type: Journal    
DOI: 10.1007/s11033-009-9838-2     Document Type: Article

References (37)

1. MJ Zhu SH Zhao 2007 Candidate gene identification approach: progress and challenges Int J Biol Sci 3 420 427 1:CAS:528:DC%2BD2sXhtlWks7jF 17998950
2. MG Emara H Kim 2003 Genetic markers and their application in poultry breeding Poult Sci 82 952 957 1:CAS:528:DC%2BD3sXkvVKqtro%3D 12817450
3. R Jiang J Li L Qu H Li N Yang 2004 A new single nucleotide polymorphism in the chicken pituitary-specific transcription factor (POU1F1) gene associated with growth rate Anim Genet 35 344 346 10.1111/j.1365-2052.2004.01164.x 1:CAS:528:DC%2BD2cXntVGqtbs%3D 15265078 (Pubitemid 39040179)
4. H Li N Deeb H Zhou CM Ashwell SJ Lamont 2005 Chicken quantitative trait loci for growth and body composition associated with the very low density apolipoprotein-II gene Poult Sci 84 697 703 1:CAS:528:DC%2BD2MXktF2itbg%3D 15913180
5. H Zhou AD Mitchell JP McMurtry CM Ashwell SJ Lamont 2005 Insulin-like growth factor-I gene polymorphism associations with growth, body composition, skeleton integrity, and metabolic traits in chickens Poult Sci 84 212 219 1:CAS:528:DC%2BD2MXhs1ehuro%3D 15742956
6. ZP Cao SZ Wang QG Wang YX Wang H Li 2007 Association of Spot14alpha gene polymorphisms with body weight in the chicken Poult Sci 86 1873 1880 1:CAS:528:DC%2BD2sXhtVygu7rI 17704373
7. S Liu SZ Wang ZH Li H Li 2007 Association of single nucleotide polymorphism of chicken uncoupling protein gene with muscle and fatness traits J Anim Breed Genet 124 230 235 10.1111/j.1439-0388.2007.00654.x 1:CAS:528:DC%2BD2sXhtVent7%2FP 17651326 (Pubitemid 47120766)
8. EN Olson M Perry RA Schulz 1995 Regulation of muscle differentiation by the MEF2 family of MADS box transcription factors Dev Biol 172 2 14 10.1006/dbio.1995.0002 1:CAS:528:DyaK2MXptFGru74%3D 7589800
9. YT Yu RE Breitbart LB Smoot Y Lee V Mahdavi B Nadal-Ginard 1992 Human myocyte-specific enhancer factor 2 comprises a group of tissue-restricted MADS box transcription factors Genes Dev 6 1783 1798 10.1101/gad.6.9.1783 1:CAS:528:DyaK3sXkt1ajur0%3D 1516833
10. JF Martin JM Miano CM Hustad NG Copeland NA Jenkins EN Olson 1994 A Mef2 gene that generates a muscle-specific isoform via alternative mRNA splicing Mol Cell Biol 14 1647 1656 1:CAS:528:DyaK2cXis1alu7w%3D 8114702
11. GM Hobson R Krahe E Garcia MJ Siciliano VL Funanage 1995 Regional chromosomal assignments for four members of the MADS domain transcription enhancer factor 2 (MEF2) gene family to human chromosomes15q26, 19p12, 5q14, and 1q12-q23 BMC Genomics 29 704 711 1:CAS:528:DyaK2MXovVOhsr4%3D
12. LA Gossett DJ Kelvin EA Sternberg EN Olson 1989 A new myocyte-specific enhancer-binding factor that recognizes a conserved element associated with multiple muscle-specific genes Mol Cell Biol 9 5022 5033 1:CAS:528:DyaK3cXhvVam 2601707
13. RL Davis PF Cheng AB Lassar H Weintraub 1990 The MyoD DNA binding domain contains a recognition code for muscle-specific gene activation Cell 60 733 746 10.1016/0092-8674(90)90088-V 1:CAS:528:DyaK3cXhvFaqtLg%3D 2155707 (Pubitemid 20086887)
14. T Morisaki EW Holmes 1993 Functionally distinct elements are required for expression of the AMPD1 gene in myocytes Mol Cell Biol 13 5854 5860 1:CAS:528:DyaK3sXmsValuro%3D 8355716
15. S Feo V Antona G Barbieri R Passantino L Cali A Giallongo 1995 Transcription of the human beta enolase gene (ENO-3) is regulated by an intronic muscle-specific enhancer that binds myocyte-specific enhancer factor 2 proteins nd ubiquitous G-rich-box binding factors Mol Cell Biol 15 5991 6002 1:CAS:528:DyaK2MXovVylur0%3D 7565752
16. MV Rao MJ Donoghue JP Merlie JR Sanes 1996 Distinct regulatory elements control muscle-specific, fiber-type-selective, and axially graded expression of a myosin lightchain gene in transgenic mice Mol Cell Biol 16 3909 3922 1:CAS:528:DyaK28XjvVWmsr0%3D 8668209
17. DZ Wang MR Valdez J McAnally J Richardson EN Olson 2001 The Mef2c gene is a direct transcriptional target of myogenic bHLH and MEF2 proteins during skeletal muscle development Development 128 4623 4633 1:CAS:528: DC%2BD3MXptVGksr4%3D 11714687
18. BA Bour MA O'Brien WL Lockwood ES Goldstein R Bodmer PH Taghert SM Abmayr HT Nguyen 1995 Drosophila MEF2, a transcription factor that is essential for myogenesis Genes Dev 9 730 741 10.1101/gad.9.6.730 1:CAS:528:DyaK2MXltVWqsL0%3D 7729689
19. B Lilly B Zhao G Ranganayakulu BM Paterson RA Schulz EN Olson 1995 Requirement of MADS domain transcription factor D-MEF2 for muscle formation in Drosophila Science 267 688 693 10.1126/science.7839146 1:CAS:528: DyaK2MXjsFGltLo%3D 7839146
20. Y Hinits SM Hughes 2007 Mef2s are required for thick filament formation in nascent muscle fibres Development 134 2511 2519 10.1242/dev.007088 1:CAS:528:DC%2BD2sXosVKrtLc%3D 17537787 (Pubitemid 47074145)
21. JD Molkentin BL Black JF Martin EN Olson 1995 Cooperative activation of muscle gene expression by MEF2 and myogenic bHLH proteins Cell 83 1125 1136 10.1016/0092-8674(95)90139-6 1:CAS:528:DyaK28XhsVOnsA%3D%3D 8548800 (Pubitemid 26007804)
22. DB Spicer J Rhee WL Cheung AB Lassar 1996 Inhibition of myogenic bHLH and MEF2 transcription factors by the bHLH protein Twist Science 272 1476 1480 10.1126/science.272.5267.1476 1:CAS:528:DyaK28XjsVCksbw%3D 8633239
23. OI Ornatsky JJ Andreucci JC McDermott 1997 A dominant-negative form of transcription factor MEF2 inhibits myogenesis J Biol Chem 272 33271 33278 10.1074/jbc.272.52.33271 1:CAS:528:DyaK1cXpslOm 9407117 (Pubitemid 28023675)
24. A Buchberger HH Arnold 1999 The MADS domain containing transcription factor cMef2a is expressed in heart and skeletal muscle during embryonic chick development Dev Genes Evol 209 376 381 10.1007/s004270050267 1:CAS:528:DyaK1MXivFOlu74%3D 10370120 (Pubitemid 29261505)
25. H Wu EN Olson 2002 Activation of the MEF2 transcription factor in skeletal muscles from myotonic mice J Clin Invest 109 1327 1333 1:CAS:528:DC%2BD38XjvFCls7w%3D 12021248
26. A L'honore V Rana N Arsic C Franckhauser NJ Lamb A Fernandez 2007 Identification of a new hybrid serum response factor and myocyte enhancer factor 2-binding element in MyoD enhancer required for MyoD expression during myogenesis Mol Biol Cell 18 1992 2001 10.1091/mbc.E06-09-0867 17377068 (Pubitemid 46911352)
27. MJ Potthoff MA Arnold J McAnally JA Richardson R Bassel-Duby EN Olson 2007 Regulation of skeletal muscle sarcomere integrity and postnatal muscle function by Mef2c Mol Cell Biol 27 8143 8151 10.1128/MCB.01187-07 1:CAS:528:DC%2BD2sXhsVeis7fO 17875930 (Pubitemid 350234229)
28. MJ Potthoff H Wu MA Arnold JM Shelton J Backs J McAnally JA Richardson R Bassel-Duby EN Olson 2007 Histone deacetylase degradation and MEF2 activation promote the formation of slow-twitch myofibers J Clin Invest 117 2459 2467 10.1172/JCI31960 1:CAS:528:DC%2BD2sXhtVCms7vI 17786239 (Pubitemid 47494347)
29. M Stephens NJ Smith P Donnelly 2001 A new statistical method for haplotype reconstruction from population data Am J Hum Genet 68 978 989 10.1086/319501 1:STN:280:DC%2BD3M3kslWgsA%3D%3D 11254454 (Pubitemid 32289743)
30. H Li N Deeb H Zhou AD Mitchell CM Ashwell SJ Lamont 2003 Chicken quantitative trait loci for growth and body composition associated with transforming growth factor- genes Poult Sci 82 347 356 1:CAS:528: DC%2BD3sXivVGqur8%3D 12705392 (Pubitemid 38641949)
31. S Kaushal JW Schneider B Nadal-Ginard V Mahdavi 1994 Activation of the myogenic lineage by MEF2A, a factor that induces and cooperates with MyoD Science 266 1236 1240 10.1126/science.7973707 1:CAS:528:DyaK2MXit1GrtLc%3D 7973707 (Pubitemid 24371281)
32. HH Musa GH Chen JH Cheng BC Li DM Mekki 2006 Study on carcass characteristics of chicken breeds raised under the intensive condition Int J Poult Sci 5 530 533 10.3923/ijps.2006.530.533
33. MJ Daly JD Rioux SF Schaffner 2001 High-resolution haplotype structure in the human genome Nat Genet 29 229 232 10.1038/ng1001-229 1:CAS:528: DC%2BD3MXnsFKns78%3D 11586305 (Pubitemid 32952664)
34. K Zhang P Calabrese M Nordborg F Sun 2002 Haplotype block structure and its applications to association studies: power and study designs Am J Hum Genet 71 1386 1394 10.1086/344780 1:CAS:528:DC%2BD3sXjsFSg 12439824 (Pubitemid 36015892)
35. QQ Huang YX Fu E Boerwinkle 2003 Comparison of strategies for selecting single nucleotide polymorphisms for case/control association studies Hum Genet 113 253 257 10.1007/s00439-003-0965-x 1:CAS:528:DC%2BD3sXlsFKmsr4%3D 12811538 (Pubitemid 36992284)
36. WH Zhang A Collins NE Morton 2004 Does haplotype diversity predict power for association mapping of disease susceptibility Hum Genet 115 157 164 10.1007/s00439-004-1122-x 15221450
37. K Zhang Z Qin T Chen JS Liu MS Waterman F Sun 2005 HapBlock: haplotype block partitioning and tag SNP selection software using a set of dynamic programming algorithms Bioinformatics 21 131 134 10.1093/bioinformatics/bth482 1:CAS:528:DC%2BD2MXisVWhtw%3D%3D 15333454