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Volumn 21, Issue 1, 2005, Pages 131-134

HapBlock: Haplotype block partitioning and tag SNP selection software using a set of dynamic programming algorithms

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; COMPUTER PROGRAM; GENE LINKAGE DISEQUILIBRIUM; GENETIC ALGORITHM; GENETIC SELECTION; GENOTYPE; HAPLOTYPE; HUMAN GENOME; PEDIGREE ANALYSIS; PRIORITY JOURNAL; PROCESS DESIGN; SINGLE NUCLEOTIDE POLYMORPHISM;

EID: 12744253764     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/bth482     Document Type: Article
Times cited : (95)

References (15)
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  • 5
    • 0037311771 scopus 로고    scopus 로고
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    • Ke,X. and Cardon,L.R. (2003) Efficient selective screening of haplotype tag SNPs. Bioinformatics, 19, 287-288.
    • (2003) Bioinformatics , vol.19 , pp. 287-288
    • Ke, X.1    Cardon, L.R.2
  • 6
    • 0038315436 scopus 로고    scopus 로고
    • Entropy as a measure for linkage disequilibrium over multilocus haplotype blocks
    • Nothnagel,M., Furst,R. and Rohde,K. (2002) Entropy as a measure for linkage disequilibrium over multilocus haplotype blocks. Hum. Hered., 54, 186-198.
    • (2002) Hum. Hered. , vol.54 , pp. 186-198
    • Nothnagel, M.1    Furst, R.2    Rohde, K.3
  • 8
    • 0036844521 scopus 로고    scopus 로고
    • Partitioning-Ligation-Expectation-Maximization Algorithm for haplotype inference with single-nucleotide polymorphisms
    • Qin,Z., Niu,T. and Liu,J. (2002) Partitioning-Ligation-Expectation-Maximization Algorithm for haplotype inference with single-nucleotide polymorphisms. Am. J. Hum. Genet., 71, 1242-1247.
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    • Qin, Z.1    Niu, T.2    Liu, J.3
  • 9
    • 0043175289 scopus 로고    scopus 로고
    • Choosing haplotype-tagging SNPs based on unphased genotype data using preliminary sample of unrelated subjects with an example from the multiethic cohort study
    • Stram,D.O., Haiman,C.A., Hirschhorn,J.N., Altshuler,D., Kolonel,L.N., Henderson,B.E. and Pike,M.C. (2003) Choosing haplotype-tagging SNPs based on unphased genotype data using preliminary sample of unrelated subjects with an example from the multiethic cohort study. Hum. Hered., 55, 27-36.
    • (2003) Hum. Hered. , vol.55 , pp. 27-36
    • Stram, D.O.1    Haiman, C.A.2    Hirschhorn, J.N.3    Altshuler, D.4    Kolonel, L.N.5    Henderson, B.E.6    Pike, M.C.7
  • 10
    • 0036844238 scopus 로고    scopus 로고
    • Distribution of recombination crossovers and the origin of haplotype blocks: The interplay of population history, recombination, and mutation
    • Wang,N., Akey,J.M., Zhang,K., Chakraborty,K. and Jin,L. (2002) Distribution of recombination crossovers and the origin of haplotype blocks: the interplay of population history, recombination, and mutation. Am. J. Hum. Genet., 71, 1227-1234.
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  • 12
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    • HaploBlockFinder: Haplotype block analysis
    • Zhang,K. and Jin,L. (2003) HaploBlockFinder: haplotype block analysis. Bioinformatics, 19, 1300-1301.
    • (2003) Bioinformatics , vol.19 , pp. 1300-1301
    • Zhang, K.1    Jin, L.2
  • 13
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    • Haplotype block partitioning and tag SNP selection using genotype data and their applications to association studies
    • Zhang,K., Qin,Z., Ting,C., Waterman,M.S., Liu,J.S. and Sun,F. (2004a) Haplotype block partitioning and tag SNP selection using genotype data and their applications to association studies. Genome Res., 14, 908-916.
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    • Dynamic programming algorithms for haplotype block partitioning: Applications to human chromosome 21 haplotype data
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    • Zhang, K.1    Sun, F.2    Waterman, M.S.3    Chen, T.4
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    • HAPLORE: A program for haplotype reconstruction in general pedigrees without recombination
    • (in press)
    • Zhang,K., Sun,F. and Zhao,H. (2004b) HAPLORE: a program for haplotype reconstruction in general pedigrees without recombination. Bioinformatics, (in press).
    • (2004) Bioinformatics
    • Zhang, K.1    Sun, F.2    Zhao, H.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.