Association of Spot14α gene polymorphisms with body weight in the chicken

Poultry Science

Volumn 86, Issue 9, 2007, Pages 1873-1880

  Cao, Z P ^a   Wang, S Z ^a   Wang, Q G ^a   Wang, Y X ^a   Li, H ^a  

^a NORTHEAST AGRICULTURAL UNIVERSITY   (China)

Author keywords

Association; Body weight; Chicken; Polymorphism; Spot14 gene

Indexed keywords

AVES; MAMMALIA;

ANIMAL; ANIMAL DISEASE; ARTICLE; BODY COMPOSITION; BODY WEIGHT; CHICKEN; GENE LINKAGE DISEQUILIBRIUM; GENETIC POLYMORPHISM; GENETICS; HAPLOTYPE; PHYSIOLOGY; POLYMERASE CHAIN REACTION; QUANTITATIVE TRAIT LOCUS; RESTRICTION FRAGMENT LENGTH POLYMORPHISM;

ANIMALS; BODY COMPOSITION; BODY WEIGHT; CHICKENS; HAPLOTYPES; LINKAGE DISEQUILIBRIUM; POLYMERASE CHAIN REACTION; POLYMORPHISM, GENETIC; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; QUANTITATIVE TRAIT LOCI;

EID: 35348830284     PISSN: 00325791     EISSN: 15253171     Source Type: Journal    
DOI: 10.1093/ps/86.9.1873     Document Type: Article

References (42)

1. Alex, D., F. Bettina, F. David, C. Alastair, M. F. David, W. Michael, E. M. Hugh, B. Douglas, M. Andrew, and N. A. P. Colin. 2002. Haplotype analysis of the PPARα Pro12Ala and C1431T variants reveals opposing associations with body weight. BMC Genet. 3:21.
2. Belsing, T. Z., G. Brabant, J. J. Holst, and U. F. Rasmussen. 2003. Circulating leptin and thyroid dysfunction. Eur. J. Endocrinol. 149:257-271.
3. Brown, S. B., M. Maloney, and W. B. Kinlaw. 1997. "Spot14" protein functions at the pretranslational level in the regulation of hepatic metabolism by thyroid hormone and glucose. J. Biol. Chem. 272:2163-2166.
4. Campbell, M. C., G. W. Anderson, and C. N. Mariash. 2003. Human spot14 glucose and thyroid hormone response: Characterization and thyroid hormone response element identification. Endocrinology 144:5242-5248.
5. Carre, W., C. Diot, V. Fillon, R. P. Crooijmans, S. Lagarrigue, M. Morrisson, A. Vignal, M. A. Groenen, and M. Douaire. 2001. Development of 112 unique expressed sequence tags from chicken liver using an arbitrarily primed reverse transcriptase-polymerase chain reaction and single strand conformation gel purification method. Anim. Genet. 32:289-297.
6. Chin, W. W. 1994. Molecular mechanisms of thyroid hormone action. Thyroid 4:389-393.
7. Cogburn, L. A., R. Morgan, and J. Burnside. 2003a. Expressed sequence tags, DNA chip technology and gene expression profiling. Page 629-646 in Poultry Genetics, Breeding and Biotechnology. W. M. Muir, and S. E. Aggrey, ed. CABI Publ., Wallingford, UK.
8. Cogburn, L. A., J. Tang, J. Cui, L. Sofer, B. Leclercq, J. Simon, and J. Burnside. 2000. DNA microarray analysis of gene expression in the liver of broiler chickens divergently selected for growth rate. Poult. Sci. 79(Suppl. 1):72. (Abstr.)
9. Cogburn, L. A., X. Wang, W. Carre, L. Rejto, T. E. Porter, and S. E. Aggrey. 2003b. Systems-wide chicken DNA microarrays, gene expression profiling and discovery of functional genes. Poult. Sci. 82:6378-6383.
10. Cyrillic Software. 2000. Cyrillic 2.1 Getting Started Guide. Cyrillic Softw., Oxfordshire, UK.
11. Daly, M. J., J. D. Rioux, S. F. Schaffner, T. J. Hudson, and E. S. Lander. 2001. High-resolution haplotype structure in the human genome. Nat. Genet. 29:229-232.
12. Deeb, N., and S. J. Lamont. 2002. Genetic architecture of growth and body composition in unique chicken population. J. Hered. 93:107-118.
13. de Jesus, L. A., S. D. Carvalho, M. O. Ribeiro, M. Schneider, S. W. Kim, J. W. Harney, P. R. Larsen, and A. C. Bianco. 2001. The type 2 iodothyronine deiodinase is essential for adaptive thermogenesis in brown adipose tissue. J. Clin. Invest. 108:1379-1385.
14. Devlin, B., and N. Risch. 1995. A comparison of linkage disequilibrium measures for fine-scale mapping. Genomics 29:311-322.
15. Ikeobi, C. O. N., J. A. Woolliams, D. R. Morrice, A. Law, D. Windsor, D. W. Burt, and P. M. Hocking. 2002. Quantitative trait loci affecting fatness in the chicken. Anim. Genet. 33:428-435.
16. Jenny, H., C. L. Tang, J. M. J. Werner, K. Zhao, H. G. Zheng, P. Marjoram, D. Weigel, and M. Nordborg. 2004. Haplotype structure and phenotypic associations in the chromosomal regions surrounding two Arabidopsis thaliana flowering time loci. Genetics 168:1627-1638.
17. Jump, D. B., S. D. Clarke, O. MacDougald, and A. Thelen. 1993. Polyunsaturated fatty acids inhibit S14 gene transcription in rat liver and cultured hepatocytes. Proc. Natl. Acad. Sci. USA 90:8454-8458.
18. Jump, D. B., P. Narayan, H. Towle, and J. H. Oppenheimer. 1984. Rapid effects of triiodothyronine on hepatic gene expression. Hybridization analysis of tissue-specific triiodothyronine regulation of mRNA S14. J. Biol. Chem. 259:2789-2797.
19. Jump, D. B., and J. H. Oppenheimer. 1985. High basal expression and 3,5,3 Vtriiodothyronine regulation of messenger ribonucleic acid S14 in lipogenic tissues. Endocrinology 117:2259-2266.
20. Kim, T. H., B. H. Choi, H. K. Lee, H. S. Park, H. Y. Lee, D. H. Yoon, J. W. Lee, G. J. Jeon, I. C. Cheong, S. J. Oh, and J. Y. Han. 2005. Identification of quantitative traits loci (QTL) affecting growth traits in pigs. Asian-australas. J. Anim. Sci. 18:1524-1528.
21. Kruglyak, L. 1999. Prospects for whole-genome linkage disequilibrium mapping of common disease genes. Nat. Genet. 22:139-144.
22. Lagarrigue, S., F. Pitel, W. Carre, P. Le Roy, A. Neau, Y. Amigues, J. Simon, A. Vignal, B. Leclercq, L. A. Cogburn, and M. Douaire. 2003. An initial QTL scan for abdominal fatness and breast muscle weight in broiler chickens. Plant Anim. Genome XI Conf., San Diego, CA. http://www.intl-pag.org/11/ abstracts/P51_P595_XI.html Accessed Jan. 3, 2007.
23. Lanni, A., M. Moreno, A. Lombardi, P. de Lange, and F. Goglia. 2001. Control of energy metabolism by iodothyronines. J. Endocrinol. Invest. 24:897-913.
24. Lewontin, R. C. 1964. The interaction of selection and linkage. General considerations; heterotic models. Genetics 49:49-67.
25. Li, H., N. Deeb, H. Zhou, A. D. Mitchell, C. M. Ashwell, and S. J. Lamont. 2003. Chicken quantitative trait loci for growth and body composition associated with transforming growth factor-β genes. Poult. Sci. 82:347-356.
26. Liaw, C. W., and H. C. Towle. 1984. Characterization of a thyroid hormone responsive gene from rat. J. Biol. Chem. 259:7253-7260.
27. Lichten, M., and A. S. Goldman. 1995. Meiotic recombination hotspots. Annu. Rev. Genet. 29:423-444.
28. Liu, H. C., and H. C. Towle. 1994. Functional synergism between multiple thyroid hormone response elements regulates hepatic expression of the rat S14 gene. Mol. Endocrinol. 8:1021-1037.
29. Long, J. R., L. J. Zhao, P. Y. Liu, Y. Lu, V. Dvornyk, H. Shen, Y. J. Liu, Y. Y. Zhang, D. H. Xiong, P. Xiao, and H. W. Deng. 2004. Related Articles, Links Patterns of linkage disequilibrium and haplotype distribution in disease candidate genes. BMC Genet. 5:11-18.
30. Meng, H., J. G. Zhao, Z. H. Li, and H. Li. 2005. Single nucleotide polymorphism on peroxisome proliferators- activated receptor genes associated with fatness traits in chicken. Asianaustralas. J. Anim. Sci. 18:1221-1225.
31. National Research Council. 1994. Nutrient Requirements of Poultry. Natl. Acad. Press, Washington, DC.
32. Nishant, K. T., and M. R. Rao. 2006. Molecular features of meiotic recombination hotspots. Bioessays 28:45-56.
33. SAS Institute Inc. 2002. JMP User's Guide. SAS Inst. Inc., Cary, NC.
34. Scanes, C. G., S. Harvey, J. A. Marsh, and D. B. King. 1984. Hormones and growth in poultry. Poult. Sci. 63:2062-2074.
35. Seelig, S., C. Liaw, H. C. Towle, and J. H. Oppenheimer. 1981. Thyroid hormone attenuates and augments hepatic gene expression at a pretranslational level. Proc. Natl. Acad. Sci. USA 78:4733-4737.
36. Shih, H. M., Z. Liu, and H. C. Towle. 1995. Two CACGTG motifs with proper spacing dictate the carbohydrate regulation of hepatic gene transcription. J. Biol. Chem. 270:21991-21997.
37. Sudo, Y., Y. Goto, and C. N. Mariash. 1993. Location of a glucose-dependent response region in the rat S14 promoter. Endocrinology 133:1221-1229.
38. Wang, X., W. Carre, L. Rejto, and L. A. Cogburn. 2002. Global gene expression profiling in liver of thyroid manipulated and/or growth hormone injected broiler chickens. Poult. Sci. 81(Suppl. 1):63. (Abstr.)
39. Wang, X., W. Carre, H. Zhou, S. J. Lamont, and L. A. Cogburn. 2004. Duplicated Spot 14 genes in the chicken: Characterization and identification of polymorphisms associated with abdominal fat traits. Gene 332:79-88.
40. Zhang, B. Z., M. G. Lei, C. Y. Deng, Y. H. Xiong, B. Zuo, and F. E. Li. 2005. Association between PCR-RFLP polymorphism of the fifth intron in lipoprotein lipase gene and productive traits in pig resource family. Asian-australas. J. Anim. Sci. 18:458-462.
41. Zilz, N. D., M. B. Murray, and H. C. Towle. 1990. Identification of multiple thyroid hormone response elements located far upstream from the rat S14 promoter. J. Biol. Chem. 265:8136-8143.
42. Zou, L., S. G. Hagen, K. A. Strait, and J. H. Oppenheimer. 1994. Identification of thyroid hormone response elements in rodent Pcp-2, a developmentally regulated gene of cerebellar Purkinje cells. J. Biol. Chem. 269:13346-13352.