-
3
-
-
33947290329
-
-
JPCHAX 0022-3654. 10.1021/j100681a015
-
D. G. Truhlar and C. A. Parr, J. Phys. Chem. JPCHAX 0022-3654 75, 1844 (1971). 10.1021/j100681a015
-
(1971)
J. Phys. Chem.
, vol.75
, pp. 1844
-
-
Truhlar, D.G.1
Parr, C.A.2
-
5
-
-
0040212006
-
-
edited by G. A. Segal (Plenum, New York)
-
J. C. Tully, in Semiempirical Methods of Electronic Structure Calculations, Part A: Techniques, edited by, G. A. Segal, (Plenum, New York, 1977), p. 173.
-
(1977)
Semiempirical Methods of Electronic Structure Calculations, Part A: Techniques
, pp. 173
-
-
Tully, J.C.1
-
6
-
-
37949042675
-
-
edited by R. B. Bernstein (Plenum, New York)
-
P. J. Kuntz, in Atom-Molecule Collision Theory: A Guide for the Experimentalist, edited by, R. B. Bernstein, (Plenum, New York, 1979), p. 79.
-
(1979)
Atom-Molecule Collision Theory: A Guide for the Experimentalist
, pp. 79
-
-
Kuntz, P.J.1
-
7
-
-
0003993379
-
-
edited by D. G. Truhlar (Plenum, New York)
-
J. W. Downing and J. Michl, in Potential Energy Surfaces and Dynamics Calculations, edited by, D. G. Truhlar, (Plenum, New York, 1979), p. 199.
-
(1979)
Potential Energy Surfaces and Dynamics Calculations
, pp. 199
-
-
Downing, J.W.1
Michl, J.2
-
8
-
-
0039955903
-
-
edited by D. G. Truhlar (Plenum, New York)
-
M. Baer and I. Last, in Potential Energy Surfaces and Dynamics Calculations, edited by, D. G. Truhlar, (Plenum, New York, 1981), p. 519.
-
(1981)
Potential Energy Surfaces and Dynamics Calculations
, pp. 519
-
-
Baer, M.1
Last, I.2
-
11
-
-
4143054706
-
-
CHREAY 0009-2665. 10.1021/cr00077a011
-
D. G. Truhlar, R. Steckler, and M. S. Gordon, Chem. Rev. (Washington, D.C.) CHREAY 0009-2665 87, 217 (1987). 10.1021/cr00077a011
-
(1987)
Chem. Rev. (Washington, D.C.)
, vol.87
, pp. 217
-
-
Truhlar, D.G.1
Steckler, R.2
Gordon, M.S.3
-
12
-
-
0000677365
-
-
RMPHAT 0034-6861. 10.1103/RevModPhys.61.669
-
G. C. Schatz, Rev. Mod. Phys. RMPHAT 0034-6861 61, 669 (1989). 10.1103/RevModPhys.61.669
-
(1989)
Rev. Mod. Phys.
, vol.61
, pp. 669
-
-
Schatz, G.C.1
-
13
-
-
0036882785
-
-
TCACFW 1432-881X. 10.1007/s00214-002-0383-5
-
M. A. Collins, Theor. Chem. Acc. TCACFW 1432-881X 108, 313 (2002). 10.1007/s00214-002-0383-5
-
(2002)
Theor. Chem. Acc.
, vol.108
, pp. 313
-
-
Collins, M.A.1
-
14
-
-
36849002362
-
5 potential energy surface
-
DOI 10.1021/cr078026x
-
T. V. Albu, J. Espinosa-Garca, and D. G. Truhlar, Chem. Rev. (Washington, D.C.) CHREAY 0009-2665 107, 5101 (2007). 10.1021/cr078026x (Pubitemid 350225871)
-
(2007)
Chemical Reviews
, vol.107
, Issue.11
, pp. 5101-5132
-
-
Albu, T.V.1
Espinosa-Garcia, J.2
Truhlar, D.G.3
-
16
-
-
0037495958
-
-
JCCHDD 0192-8651. 10.1002/jcc.10252
-
T. Ishida and G. C. Schatz, J. Comput. Chem. JCCHDD 0192-8651 24, 1077 (2003). 10.1002/jcc.10252
-
(2003)
J. Comput. Chem.
, vol.24
, pp. 1077
-
-
Ishida, T.1
Schatz, G.C.2
-
17
-
-
40149094650
-
Interpolating moving least-squares methods for fitting potential energy surfaces: A strategy for efficient automatic data point placement in high dimensions
-
DOI 10.1063/1.2831790
-
R. Dawes, D. L. Thompson, A. F. Wagner, and M. Minkof, J. Chem. Phys. JCPSA6 0021-9606 128, 084107 (2008). 10.1063/1.2831790 (Pubitemid 351328682)
-
(2008)
Journal of Chemical Physics
, vol.128
, Issue.8
, pp. 084107
-
-
Dawes, R.1
Thompson, D.L.2
Wagner, A.F.3
Minkoff, M.4
-
18
-
-
65249161701
-
-
JCPSA6 0021-9606. 10.1063/1.3111261
-
R. Dawes, A. Passalaqua, A. F. Wagner, T. D. Sewell, M. Minkoff, and D. L. Thompson, J. Chem. Phys. JCPSA6 0021-9606 130, 144107 (2009). 10.1063/1.3111261
-
(2009)
J. Chem. Phys.
, vol.130
, pp. 144107
-
-
Dawes, R.1
Passalaqua, A.2
Wagner, A.F.3
Sewell, T.D.4
Minkoff, M.5
Thompson, D.L.6
-
19
-
-
32544452245
-
5
-
DOI 10.1021/jp053848o
-
Z. Jin, B. J. Braams, and J. M. Bowman, J. Phys. Chem. A JPCAFH 1089-5639 110, 1569 (2006). 10.1021/jp053848o (Pubitemid 43235723)
-
(2006)
Journal of Physical Chemistry A
, vol.110
, Issue.4
, pp. 1569-1574
-
-
Jin, Z.1
Braams, B.J.2
Bowman, J.M.3
-
20
-
-
61449107730
-
-
JCPSA6 0021-9606. 10.1063/1.3068528
-
G. Czakó, B. C. Shepler, B. J. Braams, and J. M. Bowman, J. Chem. Phys. JCPSA6 0021-9606 130, 084301 (2009). 10.1063/1.3068528
-
(2009)
J. Chem. Phys.
, vol.130
, pp. 084301
-
-
Czakó, G.1
Shepler, B.C.2
Braams, B.J.3
Bowman, J.M.4
-
21
-
-
0001477037
-
Multiconfiguration molecular mechanics algorithm for potential energy surfaces of chemical reactions
-
DOI 10.1063/1.480846
-
Y. Kim, J. C. Corchado, J. Vill̀, X. Xing, and D. G. Truhlar, J. Chem. Phys. JCPSA6 0021-9606 112, 2718 (2000). The corrected equations for the gradients and Hessians and the up-to-date algorithm are given in Ref.. 10.1063/1.480846 (Pubitemid 33640694)
-
(2000)
Journal of Chemical Physics
, vol.112
, Issue.6
, pp. 2718-2735
-
-
Kim, Y.1
Corchado, J.C.2
Villa, J.3
Xing, J.4
Truhlar, D.G.5
-
23
-
-
58449097905
-
-
JCPSA6 0021-9606. 10.1063/1.3042145
-
O. Tishchenko and D. G. Truhlar, J. Chem. Phys. JCPSA6 0021-9606 130, 024105 (2009). 10.1063/1.3042145
-
(2009)
J. Chem. Phys.
, vol.130
, pp. 024105
-
-
Tishchenko, O.1
Truhlar, D.G.2
-
27
-
-
0037118377
-
Reply to comment on molecular mechanics for chemical reactions
-
DOI 10.1021/jp0143342
-
D. G. Truhlar, J. Phys. Chem. A JPCAFH 1089-5639 106, 5048 (2002). 10.1021/jp0143342 (Pubitemid 35290031)
-
(2002)
Journal of Physical Chemistry A
, vol.106
, Issue.19
, pp. 5048-5050
-
-
Truhlar, D.G.1
-
28
-
-
2442667811
-
-
JPCAFH 1089-5639. 10.1021/jp049972+
-
H. Lin, J. Pu, T. V. Albu, and D. G. Truhlar, J. Phys. Chem. A JPCAFH 1089-5639 108, 4112 (2004). 10.1021/jp049972+
-
(2004)
J. Phys. Chem. A
, vol.108
, pp. 4112
-
-
Lin, H.1
Pu, J.2
Albu, T.V.3
Truhlar, D.G.4
-
29
-
-
0842333164
-
-
JCPSA6 0021-9606. 10.1063/1.1630305
-
K. H. Kim and Y. Kim, J. Chem. Phys. JCPSA6 0021-9606 120, 623 (2004). 10.1063/1.1630305
-
(2004)
J. Chem. Phys.
, vol.120
, pp. 623
-
-
Kim, K.H.1
Kim, Y.2
-
30
-
-
31544454989
-
Dynamics of the concerted triple proton transfer in cyclic water trimer using the multiconfiguration molecular mechanics algorithm
-
DOI 10.1021/jp0530193
-
Y. Kim and Y. Kim, J. Phys. Chem. A JPCAFH 1089-5639 110, 600 (2006). 10.1021/jp0530193 (Pubitemid 43164650)
-
(2006)
Journal of Physical Chemistry A
, vol.110
, Issue.2
, pp. 600-608
-
-
Kim, Y.1
Kim, Y.2
-
31
-
-
33846683874
-
Optimizing the performance of the multiconfiguration molecular mechanics method
-
DOI 10.1021/jp0640833
-
O. Tishchenko and D. G. Truhlar, J. Phys. Chem. A JPCAFH 1089-5639 110, 13530 (2006). 10.1021/jp0640833 (Pubitemid 46196890)
-
(2006)
Journal of Physical Chemistry A
, vol.110
, Issue.50
, pp. 13530-13536
-
-
Tishchenko, O.1
Truhlar, D.G.2
-
32
-
-
33846309628
-
-
JCTCCE 1549-9618. 10.1021/ct600171u
-
H. Lin, Y. Zhao, O. Tishchenko, and D. G. Truhlar, J. Chem. Theory Comput. JCTCCE 1549-9618 2, 1237 (2006). 10.1021/ct600171u
-
(2006)
J. Chem. Theory Comput.
, vol.2
, pp. 1237
-
-
Lin, H.1
Zhao, Y.2
Tishchenko, O.3
Truhlar, D.G.4
-
33
-
-
70350378486
-
-
JPCAFH 1089-5639. 10.1021/jp901850c
-
Y. Zhang and H. Lin, J. Phys. Chem. A JPCAFH 1089-5639 113, 11501 (2009). 10.1021/jp901850c
-
(2009)
J. Phys. Chem. A
, vol.113
, pp. 11501
-
-
Zhang, Y.1
Lin, H.2
-
36
-
-
4344577294
-
-
JPCAFH 1089-5639. 10.1021/jp048147q
-
Y. Zhao and D. G. Truhlar, J. Phys. Chem. A JPCAFH 1089-5639 108, 6908 (2004). 10.1021/jp048147q
-
(2004)
J. Phys. Chem. A
, vol.108
, pp. 6908
-
-
Zhao, Y.1
Truhlar, D.G.2
-
37
-
-
84873055189
-
-
(Wiley, New York)
-
W. J. Hehre, L. Radom, P. R. Schleyer, and J. A. Pople, Ab Initio Molecular Orbital Theory (Wiley, New York, 1986).
-
(1986)
Ab Initio Molecular Orbital Theory
-
-
Hehre, W.J.1
Radom, L.2
Schleyer, P.R.3
Pople, J.A.4
-
38
-
-
0024821263
-
Molecular mechanics. The MM3 force field for hydrocarbons. 1
-
DOI 10.1021/ja00205a001
-
N. C. Allinger, Y. H. Yuh, and J. -H. Lii, J. Am. Chem. Soc. JACSAT 0002-7863 111, 8551 (1989) 10.1021/ja00205a001; (Pubitemid 20021795)
-
(1989)
Journal of the American Chemical Society
, vol.111
, Issue.23
, pp. 8551-8566
-
-
Allinger, N.L.1
Yuh, Y.H.2
Lii, J.-H.3
-
40
-
-
0024804228
-
Molecular mechanics. The MM3 force field for hydrocarbons. 3. The van der Waals' potentials and crystal data for aliphatic and aromatic hydrocarbons
-
DOI 10.1021/ja00205a003
-
J. -H. Lii and N. L. Allinger, J. Am. Chem. Soc. JACSAT 0002-7863 111, 8576 (1989). 10.1021/ja00205a003 (Pubitemid 20021797)
-
(1989)
Journal of the American Chemical Society
, vol.111
, Issue.23
, pp. 8576-8582
-
-
Lii, J.-H.1
Allinger, N.L.2
-
41
-
-
0041784950
-
-
10.1021/jp973084f;
-
A. D. MacKerell, Jr., D. Bashford, M. Bellott, R. L. Dunbrack, J. D. Evanseck, M. J. Field, S. Fischer, J. Gao, H. Guo, S. Ha, D. Joseph-McCarthy, L. Kuchnir, K. Kuczera, F. T. K. Lau, C. Mattos, S. Michnick, T. Ngo, D. T. Nguyen, B. Prodhom, W. E. Reiher III, B. Roux, M. Schlenkrich, J. C. Smith, R. Stote, J. Straub, M. Watanabe, J. Wiorkiewicz-Kuczera, D. Yin, and M. J. Karplus, Phys. Chem. B 102, 3586 (1998) 10.1021/jp973084f;
-
(1998)
Phys. Chem. B
, vol.102
, pp. 3586
-
-
MacKerell Jr., A.D.1
Bashford, D.2
Bellott, M.3
Dunbrack, R.L.4
Evanseck, J.D.5
Field, M.J.6
Fischer, S.7
Gao, J.8
Guo, H.9
Ha, S.10
Joseph-Mccarthy, D.11
Kuchnir, L.12
Kuczera, K.13
Lau, F.T.K.14
Mattos, C.15
Michnick, S.16
Ngo, T.17
Nguyen, D.T.18
Prodhom, B.19
Reiher Iii, W.E.20
Roux, B.21
Schlenkrich, M.22
Smith, J.C.23
Stote, R.24
Straub, J.25
Watanabe, M.26
Wiorkiewicz-Kuczera, J.27
Yin, D.28
Karplus, M.J.29
more..
-
43
-
-
77749269146
-
-
MC-TINKER-2009, University of Minnesota, Minneapolis, MN
-
O. Tishchenko, M. Higashi, T. V. Albu, J. C. Corchado, Y. Kim, J. Vill̀, J. Xing, H. Lin, and D. G. Truhlar, MC-TINKER-2009, University of Minnesota, Minneapolis, MN, 2008.
-
(2008)
-
-
Tishchenko, O.1
Higashi, M.2
Albu, T.V.3
Corchado, J.C.4
Kim, Y.5
Vill̀, J.6
Xing, J.7
Lin, H.8
Truhlar, D.G.9
-
44
-
-
33845374568
-
-
ACHRE4 0001-4842. 10.1021/ar00127a001
-
G. W. Burton and K. U. Ingold, Acc. Chem. Res. ACHRE4 0001-4842 19, 194 (1986). 10.1021/ar00127a001
-
(1986)
Acc. Chem. Res.
, vol.19
, pp. 194
-
-
Burton, G.W.1
Ingold, K.U.2
-
45
-
-
0034654215
-
-
0002-7863 10.1021/ja9937674;
-
M. I. de Heer, P. Mulder, H. -G. Korth, K. U. Ingold, and J. Lusztyk, J. Am. Chem. Soc. JACSAT 0002-7863 122, 2355 (2000) 10.1021/ja9937674;
-
(2000)
J. Am. Chem. Soc. JACSAT
, vol.122
, pp. 2355
-
-
De Heer, M.I.1
Mulder, P.2
Korth, -G.H.3
Ingold, K.U.4
Lusztyk, J.5
-
47
-
-
0037130656
-
Proton-coupled electron transfer versus hydrogen atom transfer in benzyl/toluene, methoxyl/methanol, and phenoxyl/phenol self-exchange reactions
-
DOI 10.1021/ja012732c
-
J. M. Mayer, D. A. Hrovat, J. L. Thomas, and W. T. Borden, J. Am. Chem. Soc. JACSAT 0002-7863 124, 11142 (2002) 10.1021/ja012732c; (Pubitemid 35025673)
-
(2002)
Journal of the American Chemical Society
, vol.124
, Issue.37
, pp. 11142-11147
-
-
Mayer, J.M.1
Hrovat, D.A.2
Thomas, J.L.3
Borden, W.T.4
-
48
-
-
0038005812
-
Hydrogen-bonding effects on the properties of phenoxyl radicals. An EPR, kinetic, and computational study
-
DOI 10.1021/ja034963k
-
M. Lucarini, V. Mugnaini, G. F. Pedulli, and M. Guerra, J. Am. Chem. Soc. JACSAT 0002-7863 125, 8318 (2003). 10.1021/ja034963k (Pubitemid 36828597)
-
(2003)
Journal of the American Chemical Society
, vol.125
, Issue.27
, pp. 8318-8329
-
-
Lucarini, M.1
Mugnaini, V.2
Pedulli, G.F.3
Guerra, M.4
-
49
-
-
0035913772
-
Neutron diffraction study of a phenol-nitroxide radical adduct: A structural model for hydrogen atom abstraction by peroxyl radicals from vitamin E and related phenolic antioxidants [1]
-
DOI 10.1021/ja015849+
-
B. Ahrens, M. G. Davidson, V. T. Forsyth, M. F. Mahon, A. L. Johnson, S. A. Mason, R. D. Price, and P. R. Raithby, J. Am. Chem. Soc. JACSAT 0002-7863 123, 9164 (2001). 10.1021/ja015849+ (Pubitemid 32884739)
-
(2001)
Journal of the American Chemical Society
, vol.123
, Issue.37
, pp. 9164-9165
-
-
Ahrens, B.1
Davidson, M.G.2
Forsyth, V.T.3
Mahon, M.F.4
Johnson, A.L.5
Mason, S.A.6
Price, R.D.7
Raithby, P.R.8
-
52
-
-
0030949450
-
Theoretical calculation of substituent effects on the O-H bond strength of phenolic antioxidants related to vitamin E
-
DOI 10.1021/ja963378z
-
J. S. Wright, D. J. Carpenter, D. J. McKay, and K. U. Ingold, J. Am. Chem. Soc. JACSAT 0002-7863 119, 4245 (1997) 10.1021/ja963378z; (Pubitemid 27239976)
-
(1997)
Journal of the American Chemical Society
, vol.119
, Issue.18
, pp. 4245-4252
-
-
Wright, J.S.1
Carpenter, D.J.2
McKay, D.J.3
Ingold, K.U.4
-
53
-
-
0035857407
-
Predicting the activity of phenolic antioxidants: Theoretical method, analysis of substituent effects, and application to major families of antioxidants
-
DOI 10.1021/ja002455u
-
J. S. Wright, E. R. Johnson, and G. A. DiLabio, J. Am. Chem. Soc. JACSAT 0002-7863 123, 1173 (2001). 10.1021/ja002455u (Pubitemid 32148182)
-
(2001)
Journal of the American Chemical Society
, vol.123
, Issue.6
, pp. 1173-1183
-
-
Wright, J.S.1
Johnson, E.R.2
DiLabio, G.A.3
-
54
-
-
44449157255
-
A unified perspective on the hydrogen atom transfer and proton-coupled electron transfer mechanisms in terms of topographic features of the ground and excited potential energy surfaces as exemplified by the reaction between phenol and radicals
-
DOI 10.1021/ja7102907
-
O. Tishchenko, D. G. Truhlar, A. Ceulemans, and M. T. Nguyen, J. Am. Chem. Soc. JACSAT 0002-7863 130, 7000 (2008). 10.1021/ja7102907 (Pubitemid 351770142)
-
(2008)
Journal of the American Chemical Society
, vol.130
, Issue.22
, pp. 7000-7010
-
-
Tishchenko, O.1
Truhlar, D.G.2
Ceulemans, A.3
Minh, T.N.4
-
55
-
-
77749269145
-
-
See supplementary material at E-JCPSA6-132-036006 for supplementary information including new molecular mechanics parameters and Cartesian coordinates of all Shepard points
-
See supplementary material at http://dx.doi.org/10.1063/1.3310296 E-JCPSA6-132-036006 for supplementary information including new molecular mechanics parameters and Cartesian coordinates of all Shepard points.
-
-
-
|