The role of the Rdh54 protein in regulation of DNA repair in yeast Saccharomyces cerevisiae

Russian Journal of Genetics

Volumn 46, Issue 2, 2010, Pages 170-177

  Latypov, V F ^a   Kozhina, T N ^a   Kozhin, S A ^a   Korolev, V G ^a  

^a RUSSIAN ACADEMY OF SCIENCES   (Russian Federation)

Author keywords

[No Author keywords available]

Indexed keywords

SACCHAROMYCES CEREVISIAE;

EID: 77749280181     PISSN: 10227954     EISSN: 16083369     Source Type: Journal    
DOI: 10.1134/S1022795410020067     Document Type: Article

References (33)

1. Friedberg, E. C., Walker, G. C., and Siede, W., DNA Repair and Mutagenesis, Washington, DC: Am. Soc. Microbiol., 1995.
2. Demple, B. and Harrison, L., Repair of Oxidative Damage to DNA: Enzymology and Biology, Annu. Rev. Biochem., 1994, vol. 63, pp. 915-948.
3. Doetsch, P. W. and Cunningham, R. P., The Enzymology of Apurinic/Apyrimidinic Endonucleases, Mutat. Res., 1990, vol. 236, pp. 173-201.
4. Mitra, S., Hazra, T. K., Roy, R. et al., Complexities of DNA Base Excision Repair in Mammalian Cells, Mol. Cells., 1997, vol. 7, pp. 305-312.
5. Lindahl, T., DNA Repair Enzymes, Annu. Rev. Biochem., 1982, vol. 51, pp. 61-87.
6. Sakumi, K. and Sekiguchi, M., Structures and Functions of DNA Glycosylases, Mutat. Res., 1990, vol. 236, pp. 161-172.
7. Wood, R. D., DNA Repair in Eukaryotes, Annu. Rev. Biochem., 1996, vol. 65, pp. 135-167.
8. Johnson, RE., Torres-Ramos, C. A., Izumi, T., et al. Identification of APN2, the Saccharomyces cerevisiae Homolog of the Major Human AP Endonuclease HAP 1, and Its Role in the Repair of Abasic Sites, Genes Dev., 1998, vol. 12, pp. 3137-3143.
9. Prasad, R., Beard, W. A., Strauss, P. R., and Wilson, S. H., Human DNA Polymerase Beta Deoxyribose Phosphate Lyase: Substrate Specificity and Catalytic Mechanism, J. Biol. Chem., 1998, vol. 273, pp. 15263-15270.
10. Matsumoto, Y. and Kim, K., Excision of Deoxyribose Phosphate Residues by DNA Polymerase Beta during DNA Repair, Science, 1995, vol. 269, pp. 699-702.
11. Dianov, G. L., Prasad, R., Wilson, S. H., and Bohr, V. A., Role of DNA Polymerase Beta in the Excision Step of Long Patch Mammalian Base Excision Repair, J. Biol. Chem., 1999, vol. 274, pp. 13741-13743.
12. Guzder, S. N., Torres-Ramos, C, Johnson, R. E., et al., Requirement of Yeast Rad 1-Rad 10 Nuclease for the Removal of 3'-Blocked Termini from DNA Strand Breaks Induced by Reactive Oxygen Species, Genes Dev., 2004, vol. 18, pp. 2283-2291.
13. Torres-Ramos, C. A., Johnson, R. E., Prakash, L., and Prakash, S., Evidence for the Involvement of Nucleotide Excision Repair in the Removal of Abasic Sites in Yeast, Mol. Cell Biol., 2000, vol. 20, pp. 3522-3528.
14. Swanson, R. L., Morey, N. J., Doetsch P. W. and Jinks-Robertson, S., Overlapping Specificities of Base Excision Repair, Nucleotide Excision Repair, Recombination, and Translesion Synthesis Pathways for DNA Base Damage in Saccharomyces cerevisiae, Mol. Cell Biol., 1999, vol. 19, pp. 2929-2935.
15. Nilsen, H. and Krokan, H. E., Base Excision Repair in a Network of Defense and Tolerance, Carcinogenesis, 2001, vol. 22, pp. 987-998.
16. Otterlei, M., Kavli, B., Standal, R., et al., Repair of Chromosomal Abasic Sites in vivo Involves at Least Three Different Repair Pathways, EMBO J., 2000, vol. 19, pp. 5542-5551.
17. Doetsch, P. W., Morey, N. J., Swanson, R. L., and Jinks-Robertson, S., Yeast Base Excision Repair: Interconnections and Networks, Prog. Nucl. Acid Res. Mol. Biol., 2001, vol. 68, pp. 29-39.
18. Klein, H. L., RDH54, a RAD54 Homologue in Saccha-romyces cerevisiae, Is Required for Mitotic Diploid-Specific Recombination and Repair and for Meiosis, Genetics, 1997, vol. 147, pp. 1533-1545.
19. Shinohara, M., Shita-Yamaguchi, E., Buerstedde, J., et al., Characterization of the Role of the Saccharomy-ces cerevisiae RAD54 Gene and Homologue of RAD54, RDH54/TID1, in Mitosis and Meiosis, Genetics, 1997, vol. 147, pp. 1545-1556.
20. Arbel, A., Zenvirth, D., and Simchen, G., Sister Chromatid-Based DNA Repair is Mediated by RAD54, not by DMC1 or TID1, EMBO J., 1999, vol. 18, pp. 2648-2658.
21. Dresser, M. E., Ewing, D. J., Conrad, M. N., et al., DMC1 Functions in a Saccharomyces cerevisiae Mei-otic Pathway That is Largely Independent of the RAD51 Pathway, Genetics, 1997, vol. 147, pp. 533-544.
22. Petukhova, G., Sung, P., and Klein, H., Promotion of Rad51-Dependent D-Loop Formation by Yeast Recombination Factor Rdh54/Tid1, Genes Dev., 2000, vol. 14, pp. 2206-2215.
23. Kozhina, T. N., Kozhin, S. A., Latypov, V. F., and Korolev, V. G., RAD29 and RAD31, New Genes of the Saccharomyces cerevisiae Yeast Involved in the Control of DNA Repair: Isolation and Genetic Characterization of Mutants, Russ. J. Genet., 2000, vol. 36, no. 6, pp. 627-633.
24. Zakharov, I. A., Kozhin, S. A., Kozhina, T. N., and Fedorova, I. V., Sbornik metodik po genetike drozhzheisakharomitsetov (Methods in Saccharomyces Yeast Genetics), Leningrad: Nauka, 1984.
25. Longtine, M. S., McKenzie, A., III, Demarini, D. J., et al., Additional Modules for Versatile and Economical PCR-Based Gene Deletion and Modification in Saccharomyces cerevisiae, Yeast, 1998, vol. 14, pp. 953-961.
26. Korolev, V. G., Kozhina, T. N., Kozhin, S. A., et al., A System for Analysis of Yeast Mutants with Disrupted Genetic Recombination Processes, Genetika (Moscow), 1992, vol. 28, pp. 27-37.
27. Khromov-Borisov, N. N., Saffi, J., and Henriques, A. R, Perfect Order Plating: Principle and Applications, Tech. Tips Online, 2002, vol. 1, p. TO2638.
28. Bradford, M. M., A Rapid and Sensitive Method for the Quantitation of Microgram Quantities of Protein Utilizing the Principle of Protein-Dye Binding, Anal. Biochem., 1976, vol. 72, pp. 248-254.
29. Doetsch, P. W. and Cunningham, R. P., The Enzymol-ogy of Apurinic/Apyrimidinic Endonucleases, Mutat. Res., 1990, vol. 236, pp. 173-201.
30. Kozhina, T. N., Kozhin, S. A., Latypov, V. F., and Korolev, V. G., RAD29 and RAD31, New Genes of Yeast Saccharomyces cerevisiae Involved in DNA Repair Control: II. Possible Functions of These Genes, Russ. J. Genet., 2000, vol. 36, no. 8, pp. 845-852.
31. Fedorova, I. V. and Zavil'gel'skii, G. B., The Use of 8-Methoxypsoralen and Light (X = 365 nm) for Repair Study in Yeasts, Genetika (Moscow), 1977, vol. 13, no. 8, pp. 1434-1440.
32. Fedorova, I. V. and Kozhina, T. N., Repair of Plasmid DNA Treated with 8-Methoxypsoralen and Long-Wave UV Light (?=365 nm) in Wild Type and rad2 Mutant Cells of Saccharomyces cerevisiae, Genetika (Moscow), 1987, vol. 23, no. 9, pp. 1564-1572.
33. Kwon, Y, Seong, C, Chi, P., et al., ATP-Dependent Chromatin Remodeling by the Saccharomyces cerevisiae Homologous Recombination Factor Rdh54, J. Biol. Chem., 2008, vol. 283, pp. 10445-10452.