메뉴 건너뛰기




Volumn 40, Issue 2, 2010, Pages 152-163

Methodological evaluation of 2-DE to study root proteomics during nematode infection in cotton and coffee plants

Author keywords

Differential expression; Meloydogine; Proteins; Staining methods; Twodimensional gels

Indexed keywords

PROTEOME; VEGETABLE PROTEIN;

EID: 77749280009     PISSN: 10826068     EISSN: 15322297     Source Type: Journal    
DOI: 10.1080/10826060903558976     Document Type: Article
Times cited : (12)

References (34)
  • 1
    • 0036436570 scopus 로고    scopus 로고
    • Genetic diversity of root-knot nematodes from Brazil and development of SCAR markers specific for the coffee-damaging species
    • Randig, O.; Bongiovanni, M.; Carneiro, R.M.; Castagnone-Sereno, P. Genetic diversity of root-knot nematodes from Brazil and development of SCAR markers specific for the coffee-damaging species. Genome 2002, 45, 862-870.
    • (2002) Genome , vol.45 , pp. 862-870
    • Randig, O.1    Bongiovanni, M.2    Carneiro, R.M.3    Castagnone-Sereno, P.4
  • 2
    • 34247617347 scopus 로고    scopus 로고
    • Improving the utility of nematode resistance in groundnut
    • Starr, J.L.; Simpson, C.E. Improving the utility of nematode resistance in groundnut. Commun. Agric. Appl. Biol. Sci. 2006, 71, 647-651.
    • (2006) Commun. Agric. Appl. Biol. Sci. , vol.71 , pp. 647-651
    • Starr, J.L.1    Simpson, C.E.2
  • 5
    • 0035523377 scopus 로고    scopus 로고
    • Comparative proteomics to establish genetic relationships in the Brassicaceae family
    • Marques, K.; Sarazin, B.; Chane-Favre, L.; Zivy, M.; Thiellement, H. Comparative proteomics to establish genetic relationships in the Brassicaceae family. Proteomics 2001, 1, 1457-1462.
    • (2001) Proteomics , vol.1 , pp. 1457-1462
    • Marques, K.1    Sarazin, B.2    Chane-Favre, L.3    Zivy, M.4    Thiellement, H.5
  • 8
    • 33646239605 scopus 로고    scopus 로고
    • Arabidopsis thaliana proteomics: From proteome to genome
    • Baginsky, S.; Gruíssem, W. Arabidopsis thaliana proteomics: from proteome to genome. J. Exp. Bot. 2006, 57, 1485-1491.
    • (2006) J. Exp. Bot. , vol.57 , pp. 1485-1491
    • Baginsky, S.1    Gruíssem, W.2
  • 9
    • 32344434974 scopus 로고    scopus 로고
    • Comparison of two proteomics techniques used to identify proteins regulated by gibberellin in rice
    • Komatsu, S.; Zang, X.; Tanaka, N. Comparison of two proteomics techniques used to identify proteins regulated by gibberellin in rice. J. Proteome Res. 2006, 5, 270-276.
    • (2006) J. Proteome Res. , vol.5 , pp. 270-276
    • Komatsu, S.1    Zang, X.2    Tanaka, N.3
  • 11
    • 34547618990 scopus 로고    scopus 로고
    • A Iproteomic approach to study pea (Pisum sativum) responses to powdery mildew (Erysiphe pisi)
    • Curto, M.; Camafeita, E.; Lopez, J.A.; Maldonado, A.M.; Rubiales, D.; Jorrin, J.V. A Iproteomic approach to study pea (Pisum sativum) responses to powdery mildew (Erysiphe pisi). Proteomics 2006, 6, 163-174.
    • (2006) Proteomics , vol.6 , pp. 163-174
    • Curto, M.1    Camafeita, E.2    Lopez, J.A.3    Maldonado, A.M.4    Rubiales, D.5    Jorrin, J.V.6
  • 12
    • 0028078483 scopus 로고
    • Comparative study of protein electrophoretic patterns during embryogenesis in Coffea arabica cv
    • Yuffa, A.M.; De Garcia, E.G.; Nieto, M.S. Comparative study of protein electrophoretic patterns during embryogenesis in Coffea arabica cv. Catimor. Plant Cell Rep. 1994, 13, 197-202.
    • (1994) Catimor. Plant Cell Rep. , vol.13 , pp. 197-202
    • Yuffa, A.M.1    de Garcia, E.G.2    Nieto, M.S.3
  • 14
    • 0344171986 scopus 로고    scopus 로고
    • Biochemical and molecular characterization and expression of the 11S-type storage protein from Coffea arabica endosperm
    • Rogers, W.J.; Bezard, G.; Deshayes, A.; Meyer, I.; Petiard, V.; Marraccini, P. Biochemical and molecular characterization and expression of the 11S-type storage protein from Coffea arabica endosperm. Plant Physiol. Biochem. 1999, 37, 261-272.
    • (1999) Plant Physiol. Biochem. , vol.37 , pp. 261-272
    • Rogers, W.J.1    Bezard, G.2    Deshayes, A.3    Meyer, I.4    Petiard, V.5    Marraccini, P.6
  • 16
    • 60349101171 scopus 로고    scopus 로고
    • Analysis of cotton (Gossypium hirsutum) root proteomes during a compatible interaction with the black root rot fungus Thielaviopsis basicola
    • Coumans, J.V.; Poljak, A.; Raftery, M.J.; Backhouse, D.; Pereg-Gerk, L. Analysis of cotton (Gossypium hirsutum) root proteomes during a compatible interaction with the black root rot fungus Thielaviopsis basicola. Proteomics 2008, 9 (2), 335-349.
    • (2008) Proteomics , vol.9 , Issue.2 , pp. 335-349
    • Coumans, J.V.1    Poljak, A.2    Raftery, M.J.3    Backhouse, D.4    Pereg-Gerk, L.5
  • 17
    • 58149387677 scopus 로고    scopus 로고
    • Comparative proteomic analysis provides new insights into the fiber elongating process in cotton
    • Yang, Y.W.; Bian, S.M.; Yao, Y.; Liu, J.Y. Comparative proteomic analysis provides new insights into the fiber elongating process in cotton. J. Proteome Res. 2008, 7 (11), 4623-4637.
    • (2008) J. Proteome Res. , vol.7 , Issue.11 , pp. 4623-4637
    • Yang, Y.W.1    Bian, S.M.2    Yao, Y.3    Liu, J.Y.4
  • 20
    • 13844312665 scopus 로고    scopus 로고
    • Differential proteomics: An overview of gel and non-gel based approaches
    • Monteoliva, L.; Albar, J.P. Differential proteomics: an overview of gel and non-gel based approaches. Brief Funct. Genomic Proteomic 2004, 3, 220-239.
    • (2004) Brief Funct. Genomic Proteomic , vol.3 , pp. 220-239
    • Monteoliva, L.1    Albar, J.P.2
  • 21
    • 0030751010 scopus 로고    scopus 로고
    • Proteome research: Complementarity and limitations with respect to the RNA and DNA worlds
    • Humphery-Smith, I.; Cordwell, S.J.; Blackstock, W.P. Proteome research: complementarity and limitations with respect to the RNA and DNA worlds. Electrophoresis 1997, 18, 1217-1242.
    • (1997) Electrophoresis , vol.18 , pp. 1217-1242
    • Humphery-Smith, I.1    Cordwell, S.J.2    Blackstock, W.P.3
  • 22
    • 0024368544 scopus 로고
    • Application of two dimensional protein analysis for strain fingerprinting and mutant analysis of Azospirillum species
    • de Mot, R.; Vanderleyn, J. Application of two dimensional protein analysis for strain fingerprinting and mutant analysis of Azospirillum species. Can. J. Microbiol. 1989, 35, 960-967.
    • (1989) Can. J. Microbiol. , vol.35 , pp. 960-967
    • de Mot, R.1    Vanderleyn, J.2
  • 23
    • 0348206867 scopus 로고
    • Technical improvements in two-dimensional electrophoresis increase the level of genetic variation detected in wheat-seedling proteins
    • Damerval, C.; De Vienne, D.; Zivy, M.; Thiellement, H. Technical improvements in two-dimensional electrophoresis increase the level of genetic variation detected in wheat-seedling proteins. Electrophoresis 1986, 7, 52-54.
    • (1986) Electrophoresis , vol.7 , pp. 52-54
    • Damerval, C.1    de Vienne, D.2    Zivy, M.3    Thiellement, H.4
  • 24
    • 0023768475 scopus 로고
    • The current state of two-dimensional electrophoresis with immobilized pH gradients
    • Gorg, A.; Postel, W.; Gubther, S. The current state of two-dimensional electrophoresis with immobilized pH gradients. Electrophoresis 1988, 9, 531-546.
    • (1988) Electrophoresis , vol.9 , pp. 531-546
    • Gorg, A.1    Postel, W.2    Gubther, S.3
  • 25
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during the assembly of the head of the bacteriophage T4
    • Laemmli, U.K. Cleavage of structural proteins during the assembly of the head of the bacteriophage T4. Nature 1970, 227, 680-685.
    • (1970) Nature , vol.227 , pp. 680-685
    • Laemmli, U.K.1
  • 26
    • 84988074679 scopus 로고
    • Improved silver staining of plant proteins, RNA and DNA in polyacrylamide gels
    • Blum, H.; Beier, H.; Gross, H.J. Improved silver staining of plant proteins, RNA and DNA in polyacrylamide gels. Electrophoresis 1987, 8, 93-99.
    • (1987) Electrophoresis , vol.8 , pp. 93-99
    • Blum, H.1    Beier, H.2    Gross, H.J.3
  • 27
    • 0034070730 scopus 로고    scopus 로고
    • Cell surface proteins of Candida albicans: Preparation of extracts and improved detection of proteins
    • Vediyappan, G.; Bikandi, J.; Braley, R.; Chaffin, W.L. Cell surface proteins of Candida albicans: preparation of extracts and improved detection of proteins. Electrophoresis 2000, 21, 956-961.
    • (2000) Electrophoresis , vol.21 , pp. 956-961
    • Vediyappan, G.1    Bikandi, J.2    Braley, R.3    Chaffin, W.L.4
  • 29
    • 1942424845 scopus 로고    scopus 로고
    • Protein extraction and comparison of stain protocols for analysis of two-dimensional electrophoresis gels
    • Silva, J.; Carvalho, A.S.; Vitorino, R.; Domingues, P.; Teixeira, P.; Gibbs, P. Protein extraction and comparison of stain protocols for analysis of two-dimensional electrophoresis gels. Protein Pep. Lett. 2004, 11, 189-194.
    • (2004) Protein Pep. Lett. , vol.11 , pp. 189-194
    • Silva, J.1    Carvalho, A.S.2    Vitorino, R.3    Domingues, P.4    Teixeira, P.5    Gibbs, P.6
  • 30
    • 4444297375 scopus 로고    scopus 로고
    • Comparison of fluorescent stains: Relative photostability and differential staining of proteins in two-dimensional gels
    • Smejkal, G.B.; Robinson, M.H.; Lazarev, A. Comparison of fluorescent stains: relative photostability and differential staining of proteins in two-dimensional gels. Electrophoresis 2004, 25, 2511-2509.
    • (2004) Electrophoresis , vol.25 , pp. 2511-2509
    • Smejkal, G.B.1    Robinson, M.H.2    Lazarev, A.3
  • 31
    • 14844322255 scopus 로고    scopus 로고
    • Protein staining influences the quality of mass spectra obtained by peptide mass fingerprinting after separation on 2D gels A comparison of staining with coomassie brilliant blue and sypro ruby
    • Lanne, B.; Panfilov, O. Protein staining influences the quality of mass spectra obtained by peptide mass fingerprinting after separation on 2D gels A comparison of staining with coomassie brilliant blue and sypro ruby. J. Proteome Res. 2005, 4, 175-179.
    • (2005) J. Proteome Res. , vol.4 , pp. 175-179
    • Lanne, B.1    Panfilov, O.2
  • 32
    • 34848927237 scopus 로고    scopus 로고
    • Novel staining-free proteomic method for simultaneous identification of proteins and determination of their pI values by using low-molecular-mass pI markers
    • Chmelík, J.; Mazanec, K.; Slais, K. Novel staining-free proteomic method for simultaneous identification of proteins and determination of their pI values by using low-molecular-mass pI markers. Electrophoresis 2007, 28 (18), 3315-3323.
    • (2007) Electrophoresis , vol.28 , Issue.18 , pp. 3315-3323
    • Chmelík, J.1    Mazanec, K.2    Slais, K.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.