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Volumn 41, Issue 1, 2010, Pages 1-7

Drawbacks with the use of microsatellites in phylogeography: The song sparrow Melospiza melodia as a case study

Author keywords

[No Author keywords available]

Indexed keywords

ALLELE; ALLOZYME; DEMOGRAPHIC HISTORY; GENETIC DIFFERENTIATION; GENETIC MARKER; HABITAT CONSERVATION; HETEROZYGOSITY; HEURISTICS; HIERARCHICAL SYSTEM; MITOCHONDRIAL DNA; PHYLOGEOGRAPHY; POPULATION SIZE; SONGBIRD;

EID: 77649302399     PISSN: 09088857     EISSN: 1600048X     Source Type: Journal    
DOI: 10.1111/j.1600-048X.2009.04903.x     Document Type: Article
Times cited : (23)

References (34)
  • 4
    • 67649668444 scopus 로고    scopus 로고
    • Funds enough and time: mtDNA, nuDNA and the discovery of divergence
    • Barrowclough G F, Zink R M. Funds enough and time: mtDNA, nuDNA and the discovery of divergence. Mol. Ecol 2009, 18:2934-2936.
    • (2009) Mol. Ecol , vol.18 , pp. 2934-2936
    • Barrowclough, G.F.1    Zink, R.M.2
  • 5
    • 68149107553 scopus 로고    scopus 로고
    • On the relationship between population differentiation and sampling effort: is more always better?
    • Björklund M, Berget S. On the relationship between population differentiation and sampling effort: is more always better? Oikos 2009, 118:1127-1129.
    • (2009) Oikos , vol.118 , pp. 1127-1129
    • Björklund, M.1    Berget, S.2
  • 6
    • 34547663677 scopus 로고    scopus 로고
    • Contrasting patterns of mitochondrial and microsatellite genetic structure among western European populations of tawny owls (Strix aluco)
    • Brito P H. Contrasting patterns of mitochondrial and microsatellite genetic structure among western European populations of tawny owls (Strix aluco). Mol. Ecol 2007, 16:3423-3437.
    • (2007) Mol. Ecol , vol.16 , pp. 3423-3437
    • Brito, P.H.1
  • 7
    • 65449133181 scopus 로고    scopus 로고
    • Multilocus phylogeography and phylogenetics using sequence-based markers
    • Brito P H, Edwards S V. Multilocus phylogeography and phylogenetics using sequence-based markers. Genetica 2008, 135:439-455.
    • (2008) Genetica , vol.135 , pp. 439-455
    • Brito, P.H.1    Edwards, S.V.2
  • 8
    • 0036656014 scopus 로고    scopus 로고
    • Subspecific differentiation and conservation of song sparrows (Melospiza melodia) in the San Francisco Bay region inferred by microsatellite loci analysis
    • Chan Y, Arcese P. Subspecific differentiation and conservation of song sparrows (Melospiza melodia) in the San Francisco Bay region inferred by microsatellite loci analysis. Auk 2002, 119:641-657.
    • (2002) Auk , vol.119 , pp. 641-657
    • Chan, Y.1    Arcese, P.2
  • 10
    • 67649637128 scopus 로고    scopus 로고
    • Looking forwards or looking backwards in avian phylogeography? A comment on Zink and Barrowclough 2008
    • Edwards S, Bensch S. Looking forwards or looking backwards in avian phylogeography? A comment on Zink and Barrowclough 2008. Mol. Ecol 2009, 18:2930-2933.
    • (2009) Mol. Ecol , vol.18 , pp. 2930-2933
    • Edwards, S.1    Bensch, S.2
  • 11
    • 85007110786 scopus 로고    scopus 로고
    • Arlequin ver. 3.0: an integrated software package for population genetics data analysis
    • Excoffier L, Laval G, Schneider S. Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evol. Bioinform. Online 2005, 1:47-50.
    • (2005) Evol. Bioinform. Online , vol.1 , pp. 47-50
    • Excoffier, L.1    Laval, G.2    Schneider, S.3
  • 12
    • 0032188812 scopus 로고    scopus 로고
    • Geographic analysis of nucleotide diversity and song sparrow (Aves: Emberizidae) population history
    • Fry A J, Zink R M. Geographic analysis of nucleotide diversity and song sparrow (Aves: Emberizidae) population history. Mol. Ecol 1998, 7:1303-1313.
    • (1998) Mol. Ecol , vol.7 , pp. 1303-1313
    • Fry, A.J.1    Zink, R.M.2
  • 13
    • 0032965634 scopus 로고    scopus 로고
    • Highly variable loci and their interpretation in evolution and conservation
    • Hedrick P W. Highly variable loci and their interpretation in evolution and conservation. Evolution 1999, 53:313-318.
    • (1999) Evolution , vol.53 , pp. 313-318
    • Hedrick, P.W.1
  • 14
    • 1242299019 scopus 로고    scopus 로고
    • Genetic consequences of climatic oscillations in the Quaternary
    • Hewitt G M. Genetic consequences of climatic oscillations in the Quaternary. Phil. Trans. R. Soc. Lond. B 2004, 359:183-195.
    • (2004) Phil. Trans. R. Soc. Lond. B , vol.359 , pp. 183-195
    • Hewitt, G.M.1
  • 15
    • 0036695118 scopus 로고    scopus 로고
    • Mathematical consequences of the genealogical species concept
    • Hudson R R, Coyne J A. Mathematical consequences of the genealogical species concept. Evolution 2002, 56:1557-1565.
    • (2002) Evolution , vol.56 , pp. 1557-1565
    • Hudson, R.R.1    Coyne, J.A.2
  • 16
    • 0031865224 scopus 로고    scopus 로고
    • Cumulative effects of founding events during colonisation on genetic diversity and differentiation in an island and stepping-stone model
    • Le Corre V, Kremer A. Cumulative effects of founding events during colonisation on genetic diversity and differentiation in an island and stepping-stone model. J. Evol. Biol 1998, 11:495-512.
    • (1998) J. Evol. Biol , vol.11 , pp. 495-512
    • Le Corre, V.1    Kremer, A.2
  • 17
    • 57249086459 scopus 로고    scopus 로고
    • Divergence across Australia's Carpentarian barrier: statistical phylogeography of the red-backed fairy wren (Malurus melanocephalus)
    • Lee J Y, Edwards S V. Divergence across Australia's Carpentarian barrier: statistical phylogeography of the red-backed fairy wren (Malurus melanocephalus). Evolution 2008, 62:3117-3134.
    • (2008) Evolution , vol.62 , pp. 3117-3134
    • Lee, J.Y.1    Edwards, S.V.2
  • 18
    • 0028151986 scopus 로고
    • Defining evolutionarily significant units for conservation
    • Moritz C. Defining evolutionarily significant units for conservation. Trends Ecol. Evol 1994, 9:373-375.
    • (1994) Trends Ecol. Evol , vol.9 , pp. 373-375
    • Moritz, C.1
  • 19
    • 67649205405 scopus 로고    scopus 로고
    • The song sparrow, Melospiza melodia, as a ring species: patterns of geographic variation, a revision of subspecies, and implications for speciation
    • Patten M A, Pruett C L. The song sparrow, Melospiza melodia, as a ring species: patterns of geographic variation, a revision of subspecies, and implications for speciation. Syst. Biodiv 2009, 7:33-62.
    • (2009) Syst. Biodiv , vol.7 , pp. 33-62
    • Patten, M.A.1    Pruett, C.L.2
  • 20
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard J K, Stephens M, Donnelly P J. Inference of population structure using multilocus genotype data. Genetics 2000, 155:945-959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.J.3
  • 21
    • 17644372056 scopus 로고    scopus 로고
    • Northwestern song sparrow populations show genetic effects of sequential colonization
    • Pruett C L, Winker K. Northwestern song sparrow populations show genetic effects of sequential colonization. Mol. Ecol 2005, 14:1421-1434.
    • (2005) Mol. Ecol , vol.14 , pp. 1421-1434
    • Pruett, C.L.1    Winker, K.2
  • 22
    • 37549010737 scopus 로고    scopus 로고
    • Evidence for cryptic northern refugia among high- and temperate-latitude species in Beringia. A response to Stewart and Dalen (2008)
    • Pruett C L, Winker K. Evidence for cryptic northern refugia among high- and temperate-latitude species in Beringia. A response to Stewart and Dalen (2008). Climate Change 2008, 86:23-27.
    • (2008) Climate Change , vol.86 , pp. 23-27
    • Pruett, C.L.1    Winker, K.2
  • 23
    • 67649866213 scopus 로고    scopus 로고
    • Concordant and discordant signals between genetic data and described subspecies of pacific coast song sparrows
    • Pruett C L, Arcese P, Chan Y L, Wilson A G, Patten M A, Keller L F, Winker K. Concordant and discordant signals between genetic data and described subspecies of pacific coast song sparrows. Condor 2008a, 110:359-364.
    • (2008) Condor , vol.110 , pp. 359-364
    • Pruett, C.L.1    Arcese, P.2    Chan, Y.L.3    Wilson, A.G.4    Patten, M.A.5    Keller, L.F.6    Winker, K.7
  • 24
    • 45549104956 scopus 로고    scopus 로고
    • The effects of contemporary processes in maintaining the genetic structure of western song sparrows (Melospiza melodia)
    • Pruett C L, Arcese P, Chan Y L, Wilson A G, Patten M A, Keller L F, Winker K. The effects of contemporary processes in maintaining the genetic structure of western song sparrows (Melospiza melodia). Heredity 2008b, 101:67-74.
    • (2008) Heredity , vol.101 , pp. 67-74
    • Pruett, C.L.1    Arcese, P.2    Chan, Y.L.3    Wilson, A.G.4    Patten, M.A.5    Keller, L.F.6    Winker, K.7
  • 25
    • 18744406749 scopus 로고    scopus 로고
    • Pattern, process and rigor meet classification
    • Remsen J V. Pattern, process and rigor meet classification. Auk 2005, 122:403-413.
    • (2005) Auk , vol.122 , pp. 403-413
    • Remsen, J.V.1
  • 26
    • 0021038163 scopus 로고
    • Estimation for the coancestry coefficient: basis for a short-term genetic distance
    • Reynolds J, Weir BS, Cockerham CC. Estimation for the coancestry coefficient: basis for a short-term genetic distance. Genetics 1983, 105:767-779.
    • (1983) Genetics , vol.105 , pp. 767-779
    • Reynolds, J.1    Weir, B.S.2    Cockerham, C.C.3
  • 28
    • 0028816747 scopus 로고
    • A measure of population subdivision based on microsatellite allele frequencies
    • Slatkin M. A measure of population subdivision based on microsatellite allele frequencies. Genetics 1995, 139:457-462.
    • (1995) Genetics , vol.139 , pp. 457-462
    • Slatkin, M.1
  • 29
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura K, Dudley J, Nei M, Kumar S. MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol 2007, 24:1596-1599.
    • (2007) Mol. Biol. Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 30
    • 66249116333 scopus 로고    scopus 로고
    • The genetic structure and history of Africans and African Americans(and others)
    • Tishkoff S A. The genetic structure and history of Africans and African Americans(and others). Science 2009, 324:1035-1044.
    • (2009) Science , vol.324 , pp. 1035-1044
    • Tishkoff, S.A.1
  • 31
    • 1442291633 scopus 로고    scopus 로고
    • The role of subspecies in obscuring biological diversity and misleading conservation policy
    • Zink R M. The role of subspecies in obscuring biological diversity and misleading conservation policy. Proc. R. Soc. B 2004, 271:561-564.
    • (2004) Proc. R. Soc. B , vol.271 , pp. 561-564
    • Zink, R.M.1
  • 32
    • 70349593675 scopus 로고    scopus 로고
    • Microsatellite and mitochondrial DNA differentiation in the fox sparrow
    • Zink R M. Microsatellite and mitochondrial DNA differentiation in the fox sparrow. Condor 2008, 110:482-492.
    • (2008) Condor , vol.110 , pp. 482-492
    • Zink, R.M.1
  • 33
    • 0027881424 scopus 로고
    • Gene flow, refugia, and evolution of geographic variation in the song sparrow (Melospiza melodia)
    • Zink R M, Dittmann D L. Gene flow, refugia, and evolution of geographic variation in the song sparrow (Melospiza melodia). Evolution 1993, 47:717-729.
    • (1993) Evolution , vol.47 , pp. 717-729
    • Zink, R.M.1    Dittmann, D.L.2
  • 34
    • 42449136665 scopus 로고    scopus 로고
    • Mitochondrial DNA under siege in avian phylogeography
    • Zink R M, Barrowclough G F. Mitochondrial DNA under siege in avian phylogeography. Mol. Ecol 2008, 17:2107-2121.
    • (2008) Mol. Ecol , vol.17 , pp. 2107-2121
    • Zink, R.M.1    Barrowclough, G.F.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.