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Volumn 7, Issue 10, 1998, Pages 1303-1313

Geographic analysis of nucleotide diversity and song sparrow (Aves: Emberizidae) population history

Author keywords

Analysis of molecular variance (AMOVA); Control region sequences; Melospiza melodia; MtDNA; Nucleotide diversity; Pleistocene refugia

Indexed keywords

GENETIC DIVERSITY; GENETIC MODEL; HAPLOTYPE; MITOCHONDRIAL DNA; NUCLEOTIDE SEQUENCE; PHYLOGENY; POPULATION DYNAMICS; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; SONG SPARROW;

EID: 0032188812     PISSN: 09621083     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-294x.1998.00462.x     Document Type: Article
Times cited : (72)

References (61)
  • 1
    • 0003308517 scopus 로고
    • Ecogeographic Variation in Size and Proportions of Song Sparrows (Melospiza melodia)
    • American Ornithologists' Union, Washington DC
    • Aldrich JW (1984) Ecogeographic Variation in Size and Proportions of Song Sparrows (Melospiza melodia). Ornithological Monographs no. 35. American Ornithologists' Union, Washington DC.
    • (1984) Ornithological Monographs No. 35
    • Aldrich, J.W.1
  • 2
    • 0003605613 scopus 로고
    • American Ornithologists' Union, Baltimore
    • American Ornithologists' Union (1957) Check-list of North American Birds, 5th edn. American Ornithologists' Union, Baltimore.
    • (1957) Check-list of North American Birds, 5th Edn.
  • 3
    • 0030056912 scopus 로고    scopus 로고
    • The impact of population expansion and mutation rate heterogeneity on DNA sequence polymorphism
    • Aris-Brosou S, Excoffier L (1996) The impact of population expansion and mutation rate heterogeneity on DNA sequence polymorphism. Molecular Biology and Evolution, 13, 494-504.
    • (1996) Molecular Biology and Evolution , vol.13 , pp. 494-504
    • Aris-Brosou, S.1    Excoffier, L.2
  • 4
    • 0023496815 scopus 로고
    • Intraspecific phylogeography: The mitochondrial DNA bridge between population genetics and systematics
    • Avise JC, Arnold J, Ball RM et al. (1987) Intraspecific phylogeography: the mitochondrial DNA bridge between population genetics and systematics. Annual Reveiw of Ecology and Systematics, 18, 489-522.
    • (1987) Annual Reveiw of Ecology and Systematics , vol.18 , pp. 489-522
    • Avise, J.C.1    Arnold, J.2    Ball, R.M.3
  • 5
    • 0002447606 scopus 로고    scopus 로고
    • Mitochondrial control-region sequences as tools for understanding evolution
    • ed. Mindell DP, Academic Press, New York
    • Baker AJ, Marshall HD (1997) Mitochondrial control-region sequences as tools for understanding evolution. In: Avian Molecular Systematics and Evolution (ed. Mindell DP), pp. 51-82. Academic Press, New York.
    • (1997) Avian Molecular Systematics and Evolution , pp. 51-82
    • Baker, A.J.1    Marshall, H.D.2
  • 6
    • 0000228672 scopus 로고
    • Mitochondrial DNA phylogeographic differentiation among avian populations and the evolutionary significance of subspecies
    • Ball RM, Avise JC (1992) Mitochondrial DNA phylogeographic differentiation among avian populations and the evolutionary significance of subspecies. Auk, 109, 626-636.
    • (1992) Auk , vol.109 , pp. 626-636
    • Ball, R.M.1    Avise, J.C.2
  • 8
    • 0025664705 scopus 로고
    • Allopatric origin of sympatric populations of lake whitefish (Corogonus clupeaformis) as revealed by mitochondrial-DNA restriction analysis
    • Bernatchez L, Dodson JJ (1990) Allopatric origin of sympatric populations of lake whitefish (Corogonus clupeaformis) as revealed by mitochondrial-DNA restriction analysis. Evolution, 44, 1263-1271.
    • (1990) Evolution , vol.44 , pp. 1263-1271
    • Bernatchez, L.1    Dodson, J.J.2
  • 9
    • 0026276912 scopus 로고
    • Phylogeographic structure in mitochondrial DNA of lake whitefish (Corogonus clupeaformis) and its relation to Pleistocene glaciations
    • Bernatchez L, Dodson JJ (1991) Phylogeographic structure in mitochondrial DNA of lake whitefish (Corogonus clupeaformis) and its relation to Pleistocene glaciations. Evolution, 45, 1016-1035.
    • (1991) Evolution , vol.45 , pp. 1016-1035
    • Bernatchez, L.1    Dodson, J.J.2
  • 11
    • 0009891132 scopus 로고
    • Comparison of phylogenies derived from two molecular data sets in the avian genera Pipilo and Spizella
    • Dodge AG, Fry AJ, Blackwell RC, Zink RM (1995) Comparison of phylogenies derived from two molecular data sets in the avian genera Pipilo and Spizella. Wilson Bulletin, 107, 641-654.
    • (1995) Wilson Bulletin , vol.107 , pp. 641-654
    • Dodge, A.G.1    Fry, A.J.2    Blackwell, R.C.3    Zink, R.M.4
  • 13
    • 0014684371 scopus 로고
    • Differentiation of populations
    • Ehrlich PR, Raven PH (1969) Differentiation of populations. Science, 165, 1228-1232.
    • (1969) Science , vol.165 , pp. 1228-1232
    • Ehrlich, P.R.1    Raven, P.H.2
  • 15
    • 0026681074 scopus 로고
    • Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial DNA restriction data
    • Excoffier L, Smouse PE, Quattro JM (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics, 131, 479-491.
    • (1992) Genetics , vol.131 , pp. 479-491
    • Excoffier, L.1    Smouse, P.E.2    Quattro, J.M.3
  • 16
    • 0002296484 scopus 로고
    • Could a cladogram this short have arisen by chance alone?: On permutation tests for cladistic structure
    • Faith DP, Cranston PS (1991) Could a cladogram this short have arisen by chance alone?: on permutation tests for cladistic structure. Cladistics, 7, 1-28.
    • (1991) Cladistics , vol.7 , pp. 1-28
    • Faith, D.P.1    Cranston, P.S.2
  • 17
    • 0027453041 scopus 로고
    • Statistical tests of neutrality of mutations
    • Fu Y, Li W (1993) Statistical tests of neutrality of mutations. Genetics, 133, 693-709.
    • (1993) Genetics , vol.133 , pp. 693-709
    • Fu, Y.1    Li, W.2
  • 18
    • 11944273769 scopus 로고
    • Variation in mitochondrial DNA and the biogeographic history of woodrats (Neotoma) of the eastern United States
    • Hayes JP, Harrison RG (1992) Variation in mitochondrial DNA and the biogeographic history of woodrats (Neotoma) of the eastern United States. Systematic Biology, 41, 331-344.
    • (1992) Systematic Biology , vol.41 , pp. 331-344
    • Hayes, J.P.1    Harrison, R.G.2
  • 19
    • 0029860602 scopus 로고    scopus 로고
    • Some genetic consequences of ice ages, and their role in divergence and speciation
    • Hewitt GM (1996) Some genetic consequences of ice ages, and their role in divergence and speciation. Biological Journal of the Linnaean Society, 58, 247-276.
    • (1996) Biological Journal of the Linnaean Society , vol.58 , pp. 247-276
    • Hewitt, G.M.1
  • 21
    • 0028362880 scopus 로고
    • Application and accuracy of molecular phylogenies
    • Hillis DM, Huelsenbeck JP, Cunningham CW (1994) Application and accuracy of molecular phylogenies. Science, 264, 671-677.
    • (1994) Science , vol.264 , pp. 671-677
    • Hillis, D.M.1    Huelsenbeck, J.P.2    Cunningham, C.W.3
  • 22
    • 0021057447 scopus 로고
    • Environmental component of morphological differences in birds
    • James FC (1983) Environmental component of morphological differences in birds. Science, 221, 184-187.
    • (1983) Science , vol.221 , pp. 184-187
    • James, F.C.1
  • 23
    • 0002633570 scopus 로고
    • Exact results for the Moran neutral allele model
    • Kelly FP (1977) Exact results for the Moran neutral allele model. Advancements in Applied Probability, 9, 197-201.
    • (1977) Advancements in Applied Probability , vol.9 , pp. 197-201
    • Kelly, F.P.1
  • 25
    • 0024307824 scopus 로고
    • Evaluation of the maximum like-lihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea
    • Kishino H, Hasegawa M (1989) Evaluation of the maximum like-lihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea. Journal of Molecular Evolution, 29, 170-179.
    • (1989) Journal of Molecular Evolution , vol.29 , pp. 170-179
    • Kishino, H.1    Hasegawa, M.2
  • 26
    • 0000977336 scopus 로고
    • Detecting selection at the level of DNA
    • eds Selander R, Clark A, Whittam T, Sinauer, Sunderland, MA
    • Kreitman M (1991) Detecting selection at the level of DNA. In: Evolution at the Molecular Level (eds Selander R, Clark A, Whittam T), pp. 204-221. Sinauer, Sunderland, MA.
    • (1991) Evolution at the Molecular Level , pp. 204-221
    • Kreitman, M.1
  • 28
    • 0026614668 scopus 로고
    • Interspecific brood parasitism in blackbirds (Icterinae): Aphylogenetic perspective
    • Lanyon SM (1992) Interspecific brood parasitism in blackbirds (Icterinae): Aphylogenetic perspective. Science, 255, 77-79.
    • (1992) Science , vol.255 , pp. 77-79
    • Lanyon, S.M.1
  • 32
    • 1842287948 scopus 로고    scopus 로고
    • Historical demography and present day population structure of the greenfinch, Carduelis chloris - An analysis of mtDNA control-region sequences
    • Merila J, Bjorklund M, Baker AJ (1997) Historical demography and present day population structure of the greenfinch, Carduelis chloris - an analysis of mtDNA control-region sequences. Evolution, 51, 946-956.
    • (1997) Evolution , vol.51 , pp. 946-956
    • Merila, J.1    Bjorklund, M.2    Baker, A.J.3
  • 33
    • 0037735386 scopus 로고
    • Ecological factors that accelerate formation of races and species of terrestrial vertebrates
    • Miller AH (1956) Ecological factors that accelerate formation of races and species of terrestrial vertebrates. Evolution, 10, 262-277.
    • (1956) Evolution , vol.10 , pp. 262-277
    • Miller, A.H.1
  • 34
    • 0031054002 scopus 로고    scopus 로고
    • Genetic differences between the endangered San Clemente Island loggerhead shrike Lanius ludovicianus mearnsi and two neighboring subspecies demonstrated by mtDNA control region and cytochrome b sequence variation
    • Mundy NI, Winchell CS, Wodruff DS (1997) Genetic differences between the endangered San Clemente Island loggerhead shrike Lanius ludovicianus mearnsi and two neighboring subspecies demonstrated by mtDNA control region and cytochrome b sequence variation. Molecular Ecology, 6, 29-37.
    • (1997) Molecular Ecology , vol.6 , pp. 29-37
    • Mundy, N.I.1    Winchell, C.S.2    Wodruff, D.S.3
  • 36
    • 0005814023 scopus 로고
    • Mathematical model for studying genetic variation in terms of restriction endonucleases
    • Nei M, Li WH (1979) Mathematical model for studying genetic variation in terms of restriction endonucleases. Proceedings of the National Academy of Sciences of the USA, 76, 5269-5273.
    • (1979) Proceedings of the National Academy of Sciences of the USA , vol.76 , pp. 5269-5273
    • Nei, M.1    Li, W.H.2
  • 37
    • 0019346542 scopus 로고
    • DNA polymorphism detectable by restriction endonucleases
    • Nei M, Tajima F (1981) DNA polymorphism detectable by restriction endonucleases. Genetics, 97, 145-163.
    • (1981) Genetics , vol.97 , pp. 145-163
    • Nei, M.1    Tajima, F.2
  • 38
    • 0016629918 scopus 로고
    • The bottleneck effect and genetic variability in populations
    • Nei M, Maruyama T, Chakraborty R (1975) The bottleneck effect and genetic variability in populations. Evolution, 29, 1-10.
    • (1975) Evolution , vol.29 , pp. 1-10
    • Nei, M.1    Maruyama, T.2    Chakraborty, R.3
  • 39
    • 0000192554 scopus 로고
    • Mitochondrial DNA in Gasterosteus and Pleistocene glacial refugium on the Queen Charlotte Islands, British Columbia
    • O'Reilly P, Reimchen TE, Beech R, Strobek C (1993) Mitochondrial DNA in Gasterosteus and Pleistocene glacial refugium on the Queen Charlotte Islands, British Columbia. Evolution, 47, 678-684.
    • (1993) Evolution , vol.47 , pp. 678-684
    • O'Reilly, P.1    Reimchen, T.E.2    Beech, R.3    Strobek, C.4
  • 40
    • 0028251251 scopus 로고
    • Global survey of mitochondrial DNA sequences in the threespine stickleback: Evidence for recent migrations
    • Orti G, Bell MA, Reimchen TE, Meyer A (1994) Global survey of mitochondrial DNA sequences in the threespine stickleback: evidence for recent migrations. Evolution, 48, 608-622.
    • (1994) Evolution , vol.48 , pp. 608-622
    • Orti, G.1    Bell, M.A.2    Reimchen, T.E.3    Meyer, A.4
  • 41
    • 0000195233 scopus 로고    scopus 로고
    • Neutrality tests of molecular markers and the connection between DNA polymorphism, demography, and conservation biology
    • Rand DM (1996) Neutrality tests of molecular markers and the connection between DNA polymorphism, demography, and conservation biology. Conservation Biology, 10, 665-671.
    • (1996) Conservation Biology , vol.10 , pp. 665-671
    • Rand, D.M.1
  • 42
    • 0026076060 scopus 로고
    • The main regulatory region of mammalian mitochondrial DNA: Structure-function model, and evolutionary pattern
    • Saccone C, Pesole G, Sbisa E (1991) The main regulatory region of mammalian mitochondrial DNA: structure-function model, and evolutionary pattern. Journal of Molecular Evolution, 33, 83-91.
    • (1991) Journal of Molecular Evolution , vol.33 , pp. 83-91
    • Saccone, C.1    Pesole, G.2    Sbisa, E.3
  • 43
    • 0022824544 scopus 로고
    • Natural selection on beak and body size in the song sparrow
    • Schluter D, Smith JNM (1986) Natural selection on beak and body size in the song sparrow. Evolution, 40, 221-231.
    • (1986) Evolution , vol.40 , pp. 221-231
    • Schluter, D.1    Jnm, S.2
  • 44
    • 0029198792 scopus 로고
    • Mitochondrial DNA homogeneity in the phenotypically diverse redpoll finch complex (Aves: Carduelinae: Carduelis flammea-hornemanni)
    • Seutin G, Ratcliffe LM, Boag PT (1995) Mitochondrial DNA homogeneity in the phenotypically diverse redpoll finch complex (Aves: Carduelinae: Carduelis flammea-hornemanni). Evolution, 49, 962-973.
    • (1995) Evolution , vol.49 , pp. 962-973
    • Seutin, G.1    Ratcliffe, L.M.2    Boag, P.T.3
  • 46
    • 0024341852 scopus 로고
    • A cladistic measure of gene flow inferred from the phylogenies of alleles
    • Slatkin MS, Maddison WP (1989) A cladistic measure of gene flow inferred from the phylogenies of alleles. Genetics, 123, 603-613.
    • (1989) Genetics , vol.123 , pp. 603-613
    • Slatkin, M.S.1    Maddison, W.P.2
  • 49
    • 0026671944 scopus 로고
    • Evolutionary consequences of DNA mismatch inhibited repair opportunity
    • Stephan W, Langley CH (1992) Evolutionary consequences of DNA mismatch inhibited repair opportunity. Genetics, 132, 567-574.
    • (1992) Genetics , vol.132 , pp. 567-574
    • Stephan, W.1    Langley, C.H.2
  • 50
    • 0002134731 scopus 로고    scopus 로고
    • The use of mitochondrial DNA control-region sequencing in conservation genetics
    • eds Smith TB, Wayne RK, Oxford University Press, New York
    • Taberlet P (1996) The use of mitochondrial DNA control-region sequencing in conservation genetics. In: Molecular Genetic Approaches in Conservation (eds Smith TB, Wayne RK), pp. 125-142. Oxford University Press, New York.
    • (1996) Molecular Genetic Approaches in Conservation , pp. 125-142
    • Taberlet, P.1
  • 51
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
    • Tajima F (1989a) Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics, 123, 585-595.
    • (1989) Genetics , vol.123 , pp. 585-595
    • Tajima, F.1
  • 52
    • 0024762773 scopus 로고
    • The effect of change in population size on DNA polymorphism
    • Tajima F (1989b) The effect of change in population size on DNA polymorphism. Genetics, 123, 597-601.
    • (1989) Genetics , vol.123 , pp. 597-601
    • Tajima, F.1
  • 53
    • 0030162986 scopus 로고    scopus 로고
    • A phylogeny of the bear (Ursidae) inferred from complete sequences of three mitochondrial genes
    • Talbot SL, Shields GF (1996) A phylogeny of the bear (Ursidae) inferred from complete sequences of three mitochondrial genes. Molecular Phylogenetics and Evolution, 5, 567-575.
    • (1996) Molecular Phylogenetics and Evolution , vol.5 , pp. 567-575
    • Talbot, S.L.1    Shields, G.F.2
  • 54
    • 0029348907 scopus 로고
    • Primers for amplification and determination of mitochondrial control-region sequences in oscine passerines
    • Tarr CL (1995) Primers for amplification and determination of mitochondrial control-region sequences in oscine passerines. Molecular Ecology, 4, 527-529.
    • (1995) Molecular Ecology , vol.4 , pp. 527-529
    • Tarr, C.L.1
  • 55
    • 0002076299 scopus 로고
    • Proglacial lakes and the southern margin of the Laurentide ice sheet
    • eds Ruddiman WF, Wright, HE, Geological Society of America, Boulder, CO.
    • Teller JT (1987) Proglacial lakes and the southern margin of the Laurentide ice sheet. In: North America and Adjacent Oceans During the Last Deglaciation (eds Ruddiman WF, Wright, HE), pp. 39-69. Geological Society of America, Boulder, CO.
    • (1987) North America and Adjacent Oceans during the Last Deglaciation , pp. 39-69
    • Teller, J.T.1
  • 56
    • 0017222441 scopus 로고
    • Reversibility and the age of an allele I. Moran's infinitely many neutral alleles model
    • Watterson GA (1976) Reversibility and the age of an allele I. Moran's infinitely many neutral alleles model. Theoretical Population Biology, 10, 239-253.
    • (1976) Theoretical Population Biology , vol.10 , pp. 239-253
    • Watterson, G.A.1
  • 58
    • 0026305574 scopus 로고
    • A morphologic and genetic study of the island fox, Urocyon littoralis
    • Wayne RK, George SB, Gilbert D et al. (1991) A morphologic and genetic study of the island fox, Urocyon littoralis. Evolution, 45, 1849-1868.
    • (1991) Evolution , vol.45 , pp. 1849-1868
    • Wayne, R.K.1    George, S.B.2    Gilbert, D.3
  • 59
    • 0028001986 scopus 로고
    • The geography of mitochondrial DNA variation, population structure, hybridization, and species limits in the fox sparrow (Passerella iliaca)
    • Zink RM (1994) The geography of mitochondrial DNA variation, population structure, hybridization, and species limits in the fox sparrow (Passerella iliaca). Evolution, 48, 96-111.
    • (1994) Evolution , vol.48 , pp. 96-111
    • Zink, R.M.1
  • 60
    • 0002313863 scopus 로고    scopus 로고
    • Phylogeographic studies of North American birds
    • ed. Mindell DP, Academic Press, NY
    • Zink RM (1997) Phylogeographic studies of North American birds. In: Avian Molecular Systematics and Evolution (ed. Mindell DP), pp. 297-320. Academic Press, NY.
    • (1997) Avian Molecular Systematics and Evolution , pp. 297-320
    • Zink, R.M.1
  • 61
    • 0027881424 scopus 로고
    • Gene flow, refugia, and evolution of geographic variation in the song sparrow (Melospiza melodia)
    • Zink RM, Dittmann DL (1993) Gene flow, refugia, and evolution of geographic variation in the song sparrow (Melospiza melodia). Evolution, 47, 717-729.
    • (1993) Evolution , vol.47 , pp. 717-729
    • Zink, R.M.1    Dittmann, D.L.2


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