메뉴 건너뛰기




Volumn 119, Issue 3, 2002, Pages 641-657

Subspecific differentiation and conservation of Song Sparrows (Melospiza melodia) in the San Francisco Bay region inferred by microsatellite loci analysis

Author keywords

[No Author keywords available]

Indexed keywords

CONSERVATION MANAGEMENT; GENETIC DIFFERENTIATION; POPULATION GENETICS; SONGBIRD; SUBSPECIES;

EID: 0036656014     PISSN: 00048038     EISSN: None     Source Type: Journal    
DOI: 10.2307/4089964     Document Type: Article
Times cited : (36)

References (63)
  • 1
    • 0003308517 scopus 로고
    • Ecogeographic variation in size and proportions on Song Sparrows (Melospiza melodia)
    • ALDRICH, J. W. 1984. Ecogeographic Variation in Size and Proportions on Song Sparrows (Melospiza melodia). Ornithological Monographs, no. 35.
    • (1984) Ornithological Monographs , vol.35
    • Aldrich, J.W.1
  • 2
    • 0031934988 scopus 로고    scopus 로고
    • Combined use of SMM and non-SMM methods to infer fine structure and evolutionary history of closely related brook charr (Salvelinus fontinalis, Salmonidae) populations from microsatellites
    • ANGERS, B., AND L. BERNATCHEZ. 1998. Combined use of SMM and non-SMM methods to infer fine structure and evolutionary history of closely related brook charr (Salvelinus fontinalis, Salmonidae) populations from microsatellites. Molecular Biology and Evolution 15:143-159.
    • (1998) Molecular Biology and Evolution , vol.15 , pp. 143-159
    • Angers, B.1    Bernatchez, L.2
  • 3
    • 0002961523 scopus 로고
    • Principles of genealogical concordance in species concepts and biological taxonomy
    • (D. Futuyma and J. Antonovics, Eds.). Oxford University Press, New York
    • AVISE, J. C., AND R. M. BALL, JR. 1990. Principles of genealogical concordance in species concepts and biological taxonomy. Pages 45-68 in Oxford Surveys in Evolutionary Biology, vol. 7 (D. Futuyma and J. Antonovics, Eds.). Oxford University Press, New York.
    • (1990) Oxford Surveys in Evolutionary Biology , vol.7 , pp. 45-68
    • Avise, J.C.1    Ball R.M., Jr.2
  • 4
    • 0000228672 scopus 로고
    • Mitochondrial DNA phylogeographic differentiation among avian populations and the evolutionary significance of subspecies
    • BALL, R. M., JR., AND J. C. AVISE. 1992. Mitochondrial DNA phylogeographic differentiation among avian populations and the evolutionary significance of subspecies. Auk 109:626-636.
    • (1992) Auk , vol.109 , pp. 626-636
    • Ball R.M., Jr.1    Avise, J.C.2
  • 5
    • 84966164775 scopus 로고
    • A quasi-equilibrium theory of the distribution of rare alleles in a subdivided population
    • BARTON, N. H., AND M. SLATKIN. 1986. A quasi-equilibrium theory of the distribution of rare alleles in a subdivided population. Heredity 56:409-415.
    • (1986) Heredity , vol.56 , pp. 409-415
    • Barton, N.H.1    Slatkin, M.2
  • 6
    • 0010370077 scopus 로고
    • Salt water tolerance and the distribution of south San Francisco Bay Song Sparrows
    • BASHAM, M. P., AND L. R. MEWALDT. 1987. Salt water tolerance and the distribution of south San Francisco Bay Song Sparrows. Condor 89:697-709.
    • (1987) Condor , vol.89 , pp. 697-709
    • Basham, M.P.1    Mewaldt, L.R.2
  • 8
    • 0028179911 scopus 로고
    • Directions in conservation biology
    • CAUGHLEY, G. 1994. Directions in conservation biology. Journal of Animal Ecology 63:215-244.
    • (1994) Journal of Animal Ecology , vol.63 , pp. 215-244
    • Caughley, G.1
  • 10
    • 0002260099 scopus 로고
    • Variance of gene frequencies
    • COCKERHAM, C. C. 1969. Variance of gene frequencies. Evolution 23:72-84.
    • (1969) Evolution , vol.23 , pp. 72-84
    • Cockerham, C.C.1
  • 11
    • 0015818251 scopus 로고
    • Analyses of gene frequencies
    • COCKERHAM, C. C. 1973. Analyses of gene frequencies. Genetics 74:679-700.
    • (1973) Genetics , vol.74 , pp. 679-700
    • Cockerham, C.C.1
  • 12
    • 0032711229 scopus 로고    scopus 로고
    • New methods employing multilocus genotypes to select or exclude populations as origins of individuals
    • CORNUET, J. M., S. PIRY, G. LUIKART, A. ESTOUP, AND M. SOLIGNAC. 1999. New methods employing multilocus genotypes to select or exclude populations as origins of individuals. Genetics 153: 1989-2000.
    • (1999) Genetics , vol.153 , pp. 1989-2000
    • Cornuet, J.M.1    Piry, S.2    Luikart, G.3    Estoup, A.4    Solignac, M.5
  • 13
    • 0031597285 scopus 로고    scopus 로고
    • Comparative analysis of microsatellite and allozyme markers: A case study of investigating microgeographic differentiation in brown trout (Salmo trutta)
    • ESTOUP, A., F. ROUSSET, Y. MICHALAKIS, J. M. CORNUET, M. ADRIAMANGA, AND R. GUYOMARD. 1998. Comparative analysis of microsatellite and allozyme markers: A case study of investigating microgeographic differentiation in brown trout (Salmo trutta). Molecular Ecology 7:339-353.
    • (1998) Molecular Ecology , vol.7 , pp. 339-353
    • Estoup, A.1    Rousset, F.2    Michalakis, Y.3    Cornuet, J.M.4    Adriamanga, M.5    Guyomard, R.6
  • 14
    • 0026681074 scopus 로고
    • Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial DNA restriction data
    • EXCOFFIER, L., P. E. SMOUSE, and J. M. QUATTRO. 1992. Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial DNA restriction data. Genetics 131:479-491.
    • (1992) Genetics , vol.131 , pp. 479-491
    • Excoffier, L.1    Smouse, P.E.2    Quattro, J.M.3
  • 16
    • 0010405748 scopus 로고
    • Variation in blood group frequencies in populations of Song Sparrows of the San Francisco Bay Region
    • FERRELL, G. T. 1966. Variation in blood group frequencies in populations of Song Sparrows of the San Francisco Bay Region. Evolution 20:369-382.
    • (1966) Evolution , vol.20 , pp. 369-382
    • Ferrell, G.T.1
  • 17
    • 0029824589 scopus 로고    scopus 로고
    • Microgeographic patterns of genetic and morphological variation in Savannah Sparrows (Passerculus sandwichensis)
    • FREEMAN-GALLANT, C. R. 1996. Microgeographic patterns of genetic and morphological variation in Savannah Sparrows (Passerculus sandwichensis). Evolution 50:1631-1637.
    • (1996) Evolution , vol.50 , pp. 1631-1637
    • Freeman-Gallant, C.R.1
  • 18
    • 0032188812 scopus 로고    scopus 로고
    • Geographic analysis of nucleotide diversity and Song Sparrow (Aves: Emberizidae) population history
    • FRY, A. J., AND R. M. ZINK. 1998. Geographic analysis of nucleotide diversity and Song Sparrow (Aves: Emberizidae) population history. Molecular Ecology 7:1303-1313.
    • (1998) Molecular Ecology , vol.7 , pp. 1303-1313
    • Fry, A.J.1    Zink, R.M.2
  • 19
    • 0028888949 scopus 로고
    • An evaluation of genetic distances for use with microsatellite loci
    • GOLDSTEIN, D. B., A. R. LINARES, L. L. CAVALLI-SFORZA, AND M. FELDMAN, W. 1995. An evaluation of genetic distances for use with microsatellite loci. Genetics 139:463-471.
    • (1995) Genetics , vol.139 , pp. 463-471
    • Goldstein, D.B.1    Linares, A.R.2    Cavalli-Sforza, L.L.3    Feldman, M.W.4
  • 21
    • 0026689178 scopus 로고
    • Performing the exact test of Hardy-Weinberg proportions for multiple alleles
    • GUO, S. W., AND E. A. THOMPSON. 1992. Performing the exact test of Hardy-Weinberg proportions for multiple alleles. Biometrics 48:361-372.
    • (1992) Biometrics , vol.48 , pp. 361-372
    • Guo, S.W.1    Thompson, E.A.2
  • 22
    • 0000068368 scopus 로고    scopus 로고
    • Isolation of microsatellite markers in animals
    • (A. Karp, P. G. Isaac, and D. S. Ingram, Eds.). Chapman Hall, London
    • HAMMOND, R. L., I. J. SACCHERI, AND C. CIOFI. 1998. Isolation of microsatellite markers in animals. Pages 279-285 in Molecular Tools for Screening Biodiversity: Plants and Animals (A. Karp, P. G. Isaac, and D. S. Ingram, Eds.). Chapman Hall, London.
    • (1998) Molecular Tools for Screening Biodiversity: Plants and Animals , pp. 279-285
    • Hammond, R.L.1    Saccheri, I.J.2    Ciofi, C.3
  • 23
    • 0028519274 scopus 로고
    • Isolation and characterization of microsatellite loci in a passerine bird: The reed bunting Emberiza schoeniclus
    • HANOTTE, O., C. ZANON, A. PUGH, C. GREIG, A. DIXON, AND T. BURKE. 1994. Isolation and characterization of microsatellite loci in a passerine bird: The Reed Bunting Emberiza schoeniclus. Molecular Ecology 3:529-530.
    • (1994) Molecular Ecology , vol.3 , pp. 529-530
    • Hanotte, O.1    Zanon, C.2    Pugh, A.3    Greig, C.4    Dixon, A.5    Burke, T.6
  • 24
    • 0001571590 scopus 로고
    • Mitochondrial-DNA variation in the polytypic Alaskan Song Sparrow
    • HARE, M. P., AND G. F. SHIELDS. 1992. Mitochondrial-DNA variation in the polytypic Alaskan Song Sparrow. Auk 109:126-132.
    • (1992) Auk , vol.109 , pp. 126-132
    • Hare, M.P.1    Shields, G.F.2
  • 26
    • 0032965634 scopus 로고    scopus 로고
    • Perspective: Highly variable loci and their interpretation in evolution and conservation
    • HEDRICK, P. W. 1999. Perspective: Highly variable loci and their interpretation in evolution and conservation. Evolution 53:313-318.
    • (1999) Evolution , vol.53 , pp. 313-318
    • Hedrick, P.W.1
  • 27
    • 0004620475 scopus 로고    scopus 로고
    • The development of microsatellite loci in the Song Sparrow, Melospiza melodia (Aves) and genotyping errors associated with good quality DNA
    • JEFFERY, K. J., L. F. KELLER, P. A. ARCESE, AND M. W. BRUFORD. 2001. The development of microsatellite loci in the Song Sparrow, Melospiza melodia (Aves) and genotyping errors associated with good quality DNA. Molecular Ecology Notes 1: 11-13.
    • (2001) Molecular Ecology Notes , vol.1 , pp. 11-13
    • Jeffery, K.J.1    Keller, L.F.2    Arcese, P.A.3    Bruford, M.W.4
  • 28
    • 0029257180 scopus 로고
    • Population structure, stepwise mutations, heterozygote deficiency and their implications in DNA forensics
    • JIN, L., AND R. CHAKRABORTY. 1995. Population structure, stepwise mutations, heterozygote deficiency and their implications in DNA forensics. Heredity 74:274-285.
    • (1995) Heredity , vol.74 , pp. 274-285
    • Jin, L.1    Chakraborty, R.2
  • 30
    • 0024164592 scopus 로고
    • Genetics and demography in biological conservation
    • LANDE, R. 1988. Genetics and demography in biological conservation. Science 241:1455-1460.
    • (1988) Science , vol.241 , pp. 1455-1460
    • Lande, R.1
  • 31
    • 0030050477 scopus 로고    scopus 로고
    • The role of genetic variation in adaptation and population persistence in a changing environment
    • LANDE, R., AND S. SHANNON. 1996. The role of genetic variation in adaptation and population persistence in a changing environment. Evolution 50:434-437.
    • (1996) Evolution , vol.50 , pp. 434-437
    • Lande, R.1    Shannon, S.2
  • 32
    • 0000678840 scopus 로고
    • Ecologic races of Song Sparrows in the San Francisco Bay region. Part II. Geographic variation
    • MARSHALL, J. T. 1948. Ecologic races of Song Sparrows in the San Francisco Bay region. Part II. Geographic variation. Condor 50:233-256.
    • (1948) Condor , vol.50 , pp. 233-256
    • Marshall, J.T.1
  • 33
    • 0000937756 scopus 로고
    • Endemic Song Sparrows and yellowthroats of San Francisco Bay
    • MARSHALL, J. T., AND K. G. DEDRICK. 1994. Endemic Song Sparrows and yellowthroats of San Francisco Bay. Studies in Avian Biology 15:316-327.
    • (1994) Studies in Avian Biology , vol.15 , pp. 316-327
    • Marshall, J.T.1    Dedrick, K.G.2
  • 35
    • 0028151937 scopus 로고
    • Applications of mitochondrial DNA analysis in conservation: A critical review
    • MORITZ, C. 1994a. Applications of mitochondrial DNA analysis in conservation: A critical review. Molecular Ecology 3:403-413.
    • (1994) Molecular Ecology , vol.3 , pp. 403-413
    • Moritz, C.1
  • 36
    • 0028151986 scopus 로고
    • Defining "evolutionary significant units" for conservation
    • MORITZ, C. 1994b. Defining "evolutionary significant units" for conservation. Trends in Ecology and Evolution 9:373-375.
    • (1994) Trends in Ecology and Evolution , vol.9 , pp. 373-375
    • Moritz, C.1
  • 37
    • 0000411113 scopus 로고
    • Using allele frequency and phylogeny to define units for conservation and management
    • MORITZ, C., S. LAVERY, AND R. SLADE. 1995. Using allele frequency and phylogeny to define units for conservation and management. American Fisheries Society Symposium 17:249-262.
    • (1995) American Fisheries Society Symposium , vol.17 , pp. 249-262
    • Moritz, C.1    Lavery, S.2    Slade, R.3
  • 38
    • 0003154778 scopus 로고    scopus 로고
    • Application of genetics to the conservation and management of Australian fauna: Four case studies from Queensland
    • (T. B. Smith and R. K. Wayne, Eds.). Oxford University Press, New York
    • MORITZ, C., J. W. WILMER, L. POPE, W. B. SHERWIN, A. C. TAYLOR, AND C. J. LIMPUS. 1996. Application of genetics to the conservation and management of Australian fauna: Four case studies from Queensland. Pages 442-456 in Molecular Genetic Approaches in Conservation (T. B. Smith and R. K. Wayne, Eds.). Oxford University Press, New York.
    • (1996) Molecular Genetic Approaches in Conservation , pp. 442-456
    • Moritz, C.1    Wilmer, J.W.2    Pope, L.3    Sherwin, W.B.4    Taylor, A.C.5    Limpus, C.J.6
  • 39
    • 0002035007 scopus 로고
    • A description of Song Sparrow song based on instrumental analysis
    • (C. G. Sibley, Ed.). American Ornithologists' Union, Washington, D.C.
    • MULLIGAN, J. A. 1963. A description of Song Sparrow song based on instrumental analysis. Pages 272-284 in Proceedings XIII International Ornithological Conference (C. G. Sibley, Ed.). American Ornithologists' Union, Washington, D.C.
    • (1963) Proceedings XIII International Ornithological Conference , pp. 272-284
    • Mulligan, J.A.1
  • 40
    • 0018147653 scopus 로고
    • Estimation of average heterozygosity and genetic distance from a small number of individuals
    • NEI, M. 1978. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89:583-590.
    • (1978) Genetics , vol.89 , pp. 583-590
    • Nei, M.1
  • 41
    • 0000104352 scopus 로고
    • Bureaucratic mischief: Recognizing endangered species and sub-species
    • O'BRIEN, S. J., AND E. MAYR. 1991. Bureaucratic mischief: Recognizing endangered species and sub-species. Science 251:1187-1188.
    • (1991) Science , vol.251 , pp. 1187-1188
    • O'Brien, S.J.1    Mayr, E.2
  • 42
    • 0029310503 scopus 로고
    • Microsatellite analysis of population structure in Canadian polar bears
    • PAETKAU, D., W. CALVERT, I. STIRLING, AND C. STROBECK. 1995. Microsatellite analysis of population structure in Canadian polar bears. Molecular Ecology 4:347-354.
    • (1995) Molecular Ecology , vol.4 , pp. 347-354
    • Paetkau, D.1    Calvert, W.2    Stirling, I.3    Strobeck, C.4
  • 43
    • 0030782517 scopus 로고    scopus 로고
    • An empirical evaluation of genetic distance statistics using microsatellite data from bear (Ursidae) populations
    • PAETKAU, D., L. P. WAITS, P. L. CLARKSON, L. CRAIGHEAD, AND C. STROBECK. 1997. An empirical evaluation of genetic distance statistics using microsatellite data from bear (Ursidae) populations. Genetics 147:1943-1957.
    • (1997) Genetics , vol.147 , pp. 1943-1957
    • Paetkau, D.1    Waits, L.P.2    Clarkson, P.L.3    Craighead, L.4    Strobeck, C.5
  • 44
    • 0032401916 scopus 로고    scopus 로고
    • Microsatellite primers from Geospiza fortis and cross-species amplification in Darwin's finches
    • PETREN, K. 1998. Microsatellite primers from Geospiza fortis and cross-species amplification in Darwin's finches. Molecular Ecology 7:1771-1788.
    • (1998) Molecular Ecology , vol.7 , pp. 1771-1788
    • Petren, K.1
  • 45
    • 0032401913 scopus 로고    scopus 로고
    • Local genetic structure in Red Grouse (Lagopus lagopus scoticus): Evidence from microsatellite markers
    • PIERTNEY, S. B., A. D. C. MACCOLL, P. J. BACON, AND J. F. DALLAS. 1998. Local genetic structure in Red Grouse (Lagopus lagopus scoticus): Evidence from microsatellite markers. Molecular Ecology 7: 1645-1654.
    • (1998) Molecular Ecology , vol.7 , pp. 1645-1654
    • Piertney, S.B.1    MacColl, A.D.C.2    Bacon, P.J.3    Dallas, J.F.4
  • 46
    • 85036974760 scopus 로고    scopus 로고
    • Laboratoire de Modélisation et Biologie Evolutive, Unité de Recherche en Lutte Biologique, Institut National de la Recherche Agronomique, Montpellier, France
    • PIRY, S., AND J. M. CORNUET. 1999. GeneClass, Laboratoire de Modélisation et Biologie Evolutive, Unité de Recherche en Lutte Biologique, Institut National de la Recherche Agronomique, Montpellier, France.
    • (1999) GeneClass
    • Piry, S.1    Cornuet, J.M.2
  • 47
    • 0000262278 scopus 로고
    • GENEPOP (version 1.2): Population genetic software for exact tests and ecumenicism
    • RAYMOND, M., AND F. ROUSSET. 1995a. GENEPOP (version 1.2): Population genetic software for exact tests and ecumenicism. Journal of Heredity 86:248-249.
    • (1995) Journal of Heredity , vol.86 , pp. 248-249
    • Raymond, M.1    Rousset, F.2
  • 48
    • 0029178096 scopus 로고
    • An exact test for population differentiation
    • RAYMOND, M., AND F. ROUSSET. 1995b. An exact test for population differentiation. Evolution 49: 1280-1283.
    • (1995) Evolution , vol.49 , pp. 1280-1283
    • Raymond, M.1    Rousset, F.2
  • 49
    • 0000625869 scopus 로고
    • Analyzing tables of statistical tests
    • RICE, W. R. 1989. Analyzing tables of statistical tests. Evolution 43:223-225.
    • (1989) Evolution , vol.43 , pp. 223-225
    • Rice, W.R.1
  • 50
    • 0344938140 scopus 로고    scopus 로고
    • Assessing genetic structure with multiple classes of molecular markers: A case study involving the introduced fire ant Solenopsis invicta
    • ROSS, K. G., D. D. SHOEMAKER, M. J. B. KRIEGER, C. J. DEHEER, AND L. KELLER. 1999. Assessing genetic structure with multiple classes of molecular markers: a case study involving the introduced fire ant Solenopsis invicta. Molecular Biology and Evolution 16:525-543.
    • (1999) Molecular Biology and Evolution , vol.16 , pp. 525-543
    • Ross, K.G.1    Shoemaker, D.D.2    Krieger, M.J.B.3    Deheer, C.J.4    Keller, L.5
  • 51
    • 0029048325 scopus 로고
    • Testing heterozygote excess and deficiency
    • ROUSSET, F., AND M. RAYMOND. 1995. Testing heterozygote excess and deficiency. Genetics 140:1413-1419.
    • (1995) Genetics , vol.140 , pp. 1413-1419
    • Rousset, F.1    Raymond, M.2
  • 53
    • 0023159436 scopus 로고
    • Gene flow and the geographic structure of natural populations
    • SLATKIN, M. 1987. Gene flow and the geographic structure of natural populations. Science 236: 787-792.
    • (1987) Science , vol.236 , pp. 787-792
    • Slatkin, M.1
  • 54
    • 0028816747 scopus 로고
    • A measure of population subdivision based on microsatellite allele frequencies
    • SLATKIN, M. 1995. A measure of population subdivision based on microsatellite allele frequencies. Genetics 139:457-462.
    • (1995) Genetics , vol.139 , pp. 457-462
    • Slatkin, M.1
  • 57
    • 0003586754 scopus 로고    scopus 로고
    • Department of Genetics and Development, University of Illinois at Urbana-Champaign, Urbana
    • SWOFFORD, D. L., R. B. SELANDER, AND W. C. BLACK IV. 1997. BIOSYS-2. Department of Genetics and Development, University of Illinois at Urbana-Champaign, Urbana.
    • (1997) BIOSYS-2
    • Swofford, D.L.1    Selander, R.B.2    Black W.C. IV3
  • 58
    • 0029786076 scopus 로고    scopus 로고
    • Genetic distances and reconstruction of phylogenetic trees from microsatellite DNA
    • TAKEZAKI, N., AND M. NEI. 1996. Genetic distances and reconstruction of phylogenetic trees from microsatellite DNA. Genetics 144:389-399.
    • (1996) Genetics , vol.144 , pp. 389-399
    • Takezaki, N.1    Nei, M.2
  • 60
    • 0031694560 scopus 로고    scopus 로고
    • Separating the wheat from the chaff: Patterns of genetic differentiation in high gene flow species
    • WAPLES, R. S. 1998. Separating the wheat from the chaff: Patterns of genetic differentiation in high gene flow species. Journal of Heredity 89:438-450.
    • (1998) Journal of Heredity , vol.89 , pp. 438-450
    • Waples, R.S.1
  • 61
    • 0021566877 scopus 로고
    • Estimating F-statistics for the analysis of population structure
    • WEIR, B. S., AND C. C. COCKERHAM. 1984. Estimating F-statistics for the analysis of population structure. Evolution 38:1358-1370.
    • (1984) Evolution , vol.38 , pp. 1358-1370
    • Weir, B.S.1    Cockerham, C.C.2
  • 63
    • 0027881424 scopus 로고
    • Gene flow, refugia, and evolution of geographic variation in the Song Sparrow (Melospiza melodia)
    • ZINK, R. M., AND D. L. DITTMANN. 1993. Gene flow, refugia, and evolution of geographic variation in the Song Sparrow (Melospiza melodia). Evolution 47:717-729.
    • (1993) Evolution , vol.47 , pp. 717-729
    • Zink, R.M.1    Dittmann, D.L.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.