Identification of single fluorescent labels using spectroscopic microscopy

Applied Spectroscopy

Volumn 64, Issue 1, 2010, Pages 37-45

  Heider, Emily C ^a   Moussa, Barhoum ^a   Peterson, Eric M ^a   Jonathan, Schaefer ^a   Harris, Joel M ^a  

^a UNIVERSITY OF UTAH   (United States)

Author keywords

Fluorescence microscopy; PCA; Principal components cluster analysis; Single molecule detection; Spectroscopic microscopy

Indexed keywords

BIOMOLECULES; CLUSTER ANALYSIS; EMISSION SPECTROSCOPY; FLUORESCENCE; FLUORESCENCE MICROSCOPY; MOLECULAR BIOLOGY; MOLECULES; NANOCRYSTALS; NANOSPHERES; SEMICONDUCTOR DOPED POLYMERS; SEMICONDUCTOR QUANTUM DOTS; SPECTROSCOPIC ANALYSIS;

BIOMOLECULAR INTERACTIONS; CLASSIFICATION RESULTS; FLUORESCENT NANOSPHERES; INTRINSIC FLUORESCENCE; PRINCIPAL COMPONENTS; SEMICONDUCTOR NANOCRYSTALS; SINGLE DYE MOLECULES; SINGLE-MOLECULE DETECTION;

PRINCIPAL COMPONENT ANALYSIS;

5-CARBOXYTETRAMETHYLRHODAMINE SUCCINIMIDYL ESTER; BENZENESULFONIC ACID DERIVATIVE; CARBOCYANINE; CY3B N-HYDROXYSUCCINIMIDE ESTER; FLUORESCENT DYE; NANOSPHERE; POLYSTYRENE DERIVATIVE; RHODAMINE; RHODAMINE 6G;

CLUSTER ANALYSIS; DEVICES; EQUIPMENT DESIGN; FLUORESCENCE MICROSCOPY; IMAGE PROCESSING; PRINCIPAL COMPONENT ANALYSIS; PROCEDURES; SPECTROFLUOROMETRY;

BENZENESULFONATES; CARBOCYANINES; CLUSTER ANALYSIS; EQUIPMENT DESIGN; FLUORESCENT DYES; IMAGE PROCESSING, COMPUTER-ASSISTED; MICROSCOPY, FLUORESCENCE; NANOSPHERES; POLYSTYRENES; PRINCIPAL COMPONENT ANALYSIS; RHODAMINES; SPECTROMETRY, FLUORESCENCE;

EID: 77649219183     PISSN: 00037028     EISSN: None     Source Type: Journal    
DOI: 10.1366/000370210790572034     Document Type: Article

References (41)

1. R. Rigler, M. Orrit, and T. Basch, Eds., Single Molecule Spectroscopy (Springer, New York, 2002).
2. C. Wang and C. Bai, Single Molecule Chemistry and Physics, an Introduction (Springer, New York, 2006).
3. J. R. Wayment and J. M. Harris, Anal. Chem. 81, 336 (2009).
4. M. S. T. Gonçalves, Chem. Rev. 109, 190 (2009).
5. R. Y. Tsien, Annu. Rev. Biochem. 67, 509 (1998).
6. M. Bruchez, Jr., M. Moronne, P. Gin, S. Weiss, and A. P. Alivisatos, Science (Washington, D.C.) 281, 2013 (1998).
7. W. C. Chan and S. Nie, Science (Washington, D.C.) 281, 2016 (1998).
8. S. Santra, P. Zhang, K. Wang, R. Tapec, and W. Tan, Anal. Chem. 73, 4988 (2001).
9. J. L. Swift and D. T. Cramb, Biophys. J. 95, 865 (2008).
10. S. A. Soper, L. M. Davis, and E. B. Shera, J. Opt. Soc. Am. B 9, 1761 (1992).
11. M. Prummer, C. G. Hubner, B. Sick, B. Hecht, A. Renn, and U. P. Wild, Anal. Chem. 72, 443 (2000).
12. D. P. Herten, P. Tinnefeld, and M. Sauer, Appl. Phys. B: Lasers Opt. 71, 765 (2000).
13. J.-P. Knemeyer, D.-P. Herten, and M. Sauer, Anal. Chem. 75, 2147 (2003).
14. L. Cognet, G. S. Harms, G. A. Blab, P. H. M. Lommerse, and T. Schmidt, Appl. Phys. Lett. 77, 4052 (2000).
15. T. D. Lacoste, X. Michalet, F. Pinaud, D. S. Chemla, A. P. Alivisatos, and S. Weiss, Proc. Natl. Acad. Sci. U.S.A. 97, 9461 (2000).
16. Y. Ma, M. R. Shortreed, and E. S. Yeung, Anal. Chem. 72, 4640 (2000).
17. G. A. Blab, S. Oellerich, R. Schumm, and T. Schmidt, Opt. Lett. 29, 727 (2004).
18. R. Han, Y. Zhang, X. Dong, H. Gai, and E. S. Yeung, Anal. Chim. Acta 619, 209 (2008).
19. Y. Suzuki, T. Tani, K. Sutoh, and S. Kamimura, FEBS Lett. 512, 235 (2002).
20. J. Hartstra, J. P. Franke, and R. A. de Zeeuw, J. Chromatogr., B 739, 125 (2000).
21. W. Oblefias, M. Soriano, and C. Saloma, Opt. Commun. 260, 755 (2006).
22. J. E. N. Jonkman, J. Swoger, H. Kress, A. Rohrbach, and E. H. K. Stelzer, Methods Enzymol. 360, 416 (2003).
23. B. K. Lavine, Practical Guide to Chemometrics (Marcel Dekker, New York, 1992).
24. M. Otto, Chemometrics (Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim, 2007), 2nd ed.
25. K. Varmuza, Pattern Recognition in Chemistry (Springer-Verlag, Heidelberg, 1980).
26. J. S. Mattson, C. S. Mattson, M. J. Spencer, and F. W. Spencer, Anal. Chem. 49, 500 (1977).
27. R. Wolthuis, A. Travo, C. Nicolet, A. Neuville, M.-P. Gaub, D. Guenot, E. Ly, M. Manfaie, P. Jeannesson, and O. Piot, Anal. Chem. 80, 8461 (2008).
28. M. J. Adams, Anal. Proc. 28, 147 (1991).
29. M. Krause, P. Rösch, B. Radt, and J. Popp, Anal. Chem. 80, 8568 (2008).
30. N. W. Daniel, Jr., I. R. Lewis, and P. R. Griffiths, Appl. Spectrosc. 51, 1868 (1997).
31. W.-Q. Lin, J.-H. Jiang, H.-F. Yang, Y. Ozaki, G.-L. Shen, and R.-Q. Yu, Anal. Chem. 78, 6003 (2006).
32. O. Beckonert, M. E. Bollard, T. M. D. Ebbels, H. C. Keun, H. Antti, E. Holmes, J. C. Lindon, and J. K. Nicholson, Anal. Chim. Acta 490, 3 (2003).
33. P. M. Baldwin, D. Bertrand, B. Novales, B. Bouchet, G. Collobert, and D. J. Gallant, Anal. Chem. 69, 4339 (1997).
34. S. Cabredo, A. Parra, C. Saenz, and J. Anzano, Talanta 77, 1837 (2009).
35. E. R. Malinowski, Factor Analysis in Chemistry (John Wiley and Sons, New York, 2002), 3rd ed.
36. R. J. Barlow, Statistics: A Guide to the Use of Statistical Methods in the Physical Sciences (John Wiley and Sons, New York, 1989).
37. W. B. Lacy, L. G. Olson, and J. M. Harris, Anal. Chem. 71, 2564 (1999).
38. D. C. Hanley and J. M. Harris, Anal. Chem. 73, 5030 (2001).
39. W. L. Bragg, Proc. Cambridge Philosophical Soc. 17, 43 (1912).
40. E. G. Loewen and E. Popov, Diffraction Gratings and Applications (Marcel Dekker, New York, 1997).
41. N. A. Dyson, Chromatographic Integration Methods (Royal Society of Chemistry, London, 1998), 2nd ed.