-
1
-
-
0347418197
-
Collagens, modifying enzymes and their mutations in humans, flies and worms
-
Myllyharju, J.; Kivirikko, K.I. Collagens, modifying enzymes and their mutations in humans, flies and worms. Trends Genet. 2004, 20, 33-43.
-
(2004)
Trends Genet
, vol.20
, pp. 33-43
-
-
Myllyharju, J.1
Kivirikko, K.I.2
-
2
-
-
0036828795
-
Evolution of collagens
-
Exposito, J.Y.; Cluzel, C.; Garrone, R.; Lethias, C. Evolution of collagens. Anat. Rec. 2002, 268, 302-316.
-
(2002)
Anat. Rec
, vol.268
, pp. 302-316
-
-
Exposito, J.Y.1
Cluzel, C.2
Garrone, R.3
Lethias, C.4
-
3
-
-
0042357053
-
Genome-based identification and analysis of collagen-related structural motifs in bacterial and viral proteins
-
Rasmussen, M.; Jacobsson, M.; Björck, L. Genome-based identification and analysis of collagen-related structural motifs in bacterial and viral proteins. J. Biol. Chem. 2003, 278, 32313-32316.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 32313-32316
-
-
Rasmussen, M.1
Jacobsson, M.2
Björck, L.3
-
4
-
-
0029834117
-
Fungal fimbriae are composed of collagen
-
Celerin, M.; Ray, J.M.; Schisler, N.J.; Day, A.W.; Stetler-Stevenson, W.G.; Laudenbach, D.E. Fungal fimbriae are composed of collagen. EMBO J. 1996, 15, 4445-4453.
-
(1996)
EMBO J
, vol.15
, pp. 4445-4453
-
-
Celerin, M.1
Ray, J.M.2
Schisler, N.J.3
Day, A.W.4
Stetler-Stevenson, W.G.5
Laudenbach, D.E.6
-
5
-
-
39149110563
-
-
King, N.; Westbrook, M.J.; Young, S.L.; Kuo, A.; Abedin, M.; Chapman, J.; Fairclough, S.; Hellsten, U.; Isogai, Y.; Letunic, I.; Marr, M.; Pincus, D.; Putnam, N.; Rokas, A.; Wright, K.J.; Zuzow, R.; Dirks, W.; Good, M.; Goodstein, D.; Lemons, D.; Li, W.; Lyons, J.B.; Morris, A.; Nichols, S.; Richter, D.J.; Salamov, A.; Sequencing, J.G.I.; Bork, P.; Lim, W.A.; Manning, G.; Miller, W.T.; McGinnis, W.; Shapiro, H.; Tjian, R.; Grigoriev, I.V.; Rokhsar, D. The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans. Nature 2008, 451, 783-788.
-
King, N.; Westbrook, M.J.; Young, S.L.; Kuo, A.; Abedin, M.; Chapman, J.; Fairclough, S.; Hellsten, U.; Isogai, Y.; Letunic, I.; Marr, M.; Pincus, D.; Putnam, N.; Rokas, A.; Wright, K.J.; Zuzow, R.; Dirks, W.; Good, M.; Goodstein, D.; Lemons, D.; Li, W.; Lyons, J.B.; Morris, A.; Nichols, S.; Richter, D.J.; Salamov, A.; Sequencing, J.G.I.; Bork, P.; Lim, W.A.; Manning, G.; Miller, W.T.; McGinnis, W.; Shapiro, H.; Tjian, R.; Grigoriev, I.V.; Rokhsar, D. The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans. Nature 2008, 451, 783-788.
-
-
-
-
6
-
-
0027405555
-
The collagenous domains of macrophage scavenger receptors and complement component C1q mediate their similar, but not identical, binding specificities for polyanionic ligands
-
Acton, S.; Resnick, D.; Freeman, M.; Ekkel, Y.; Ashkenas, J.; Krieger, M. The collagenous domains of macrophage scavenger receptors and complement component C1q mediate their similar, but not identical, binding specificities for polyanionic ligands. J. Biol. Chem. 1993, 268, 3530-3537.
-
(1993)
J. Biol. Chem
, vol.268
, pp. 3530-3537
-
-
Acton, S.1
Resnick, D.2
Freeman, M.3
Ekkel, Y.4
Ashkenas, J.5
Krieger, M.6
-
7
-
-
34948867738
-
The collagen family members as cell adhesion proteins
-
Heino, J. The collagen family members as cell adhesion proteins. Bioessays 2007, 29, 1001-1010.
-
(2007)
Bioessays
, vol.29
, pp. 1001-1010
-
-
Heino, J.1
-
8
-
-
34548676800
-
Variants in a novel epidermal collagen gene (COL29A1) are associated with atopic dermatitis
-
Söderhäll, C.; Marenholz, I.; Kerscher, T.; Rüschendorf, F.; Esparza-Gordillo, J.; Worm, M.; Gruber, C.; Mayr, G.; Albrecht, M.; Rohde, K.; Schulz, H.; Wahn, U.; Hubner, N.; Lee, Y.A. Variants in a novel epidermal collagen gene (COL29A1) are associated with atopic dermatitis. PLoS Biol. 2007, 5, e242.
-
(2007)
PLoS Biol
, vol.5
-
-
Söderhäll, C.1
Marenholz, I.2
Kerscher, T.3
Rüschendorf, F.4
Esparza-Gordillo, J.5
Worm, M.6
Gruber, C.7
Mayr, G.8
Albrecht, M.9
Rohde, K.10
Schulz, H.11
Wahn, U.12
Hubner, N.13
Lee, Y.A.14
-
9
-
-
0025016078
-
Characterization of a fibrillar collagen gene in sponges reveals the early evolutionary appearance of two collagen gene families
-
Exposito, J.Y.; Garrone, R. Characterization of a fibrillar collagen gene in sponges reveals the early evolutionary appearance of two collagen gene families. Proc. Natl. Acad. Sci. USA 1990, 87, 6669-6673.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 6669-6673
-
-
Exposito, J.Y.1
Garrone, R.2
-
10
-
-
0031009155
-
Type IV collagen in sponges, the missing link in basement membrane ubiquity
-
Boute, N.; Exposito, J.Y.; Boury-Esnault, N.; Vacelet, J.; Noro, N.; Miyazaki, K.; Yoshizato, K.; Garrone, R. Type IV collagen in sponges, the missing link in basement membrane ubiquity. Biol. Cell. 1996, 88, 37-44.
-
(1996)
Biol. Cell
, vol.88
, pp. 37-44
-
-
Boute, N.1
Exposito, J.Y.2
Boury-Esnault, N.3
Vacelet, J.4
Noro, N.5
Miyazaki, K.6
Yoshizato, K.7
Garrone, R.8
-
11
-
-
33750948078
-
Insights into early extracellular matrix evolution: Spongin short chain collagen-related proteins are homologous to basement membrane type IV collagens and form a novel family widely distributed in invertebrates
-
Aouacheria, A.; Geourjon, C.; Aghajari, N.; Navratil, V.; Deléage, G.; Lethias, C.; Exposito, J.Y. Insights into early extracellular matrix evolution: spongin short chain collagen-related proteins are homologous to basement membrane type IV collagens and form a novel family widely distributed in invertebrates. Mol. Biol. Evol. 2006, 23, 2288-2302.
-
(2006)
Mol. Biol. Evol
, vol.23
, pp. 2288-2302
-
-
Aouacheria, A.1
Geourjon, C.2
Aghajari, N.3
Navratil, V.4
Deléage, G.5
Lethias, C.6
Exposito, J.Y.7
-
12
-
-
33745666523
-
Molecular evolution of fibrillar collagen in chordates, with implications for the evolution of vertebrate skeletons and chordate phylogeny
-
Wada, H.; Okuyama, M.; Satoh, N.; Zhang, S. Molecular evolution of fibrillar collagen in chordates, with implications for the evolution of vertebrate skeletons and chordate phylogeny. Evol. Dev. 2006, 8, 370-377.
-
(2006)
Evol. Dev
, vol.8
, pp. 370-377
-
-
Wada, H.1
Okuyama, M.2
Satoh, N.3
Zhang, S.4
-
13
-
-
0034881002
-
Really old-palaeoimmunology: Immunohistochemical analysis of extracellular matrix proteins in historic and pre-historic material
-
Wick, G.; Kalischnig, G.; Maurer, H.; Mayerl, C.; Müller, P.U. Really old-palaeoimmunology: immunohistochemical analysis of extracellular matrix proteins in historic and pre-historic material. Exp. Gerontol. 2001, 36, 1565-1579.
-
(2001)
Exp. Gerontol
, vol.36
, pp. 1565-1579
-
-
Wick, G.1
Kalischnig, G.2
Maurer, H.3
Mayerl, C.4
Müller, P.U.5
-
14
-
-
0028811680
-
Immunohistochemical and biochemical analyses of 20,000-25,000-year-old fossil cartilage
-
Franc, S.; Marzin, E.; Boutillon, M.M.; Lafont, R.; Lechéne de la Porte, P.; Herbage, D. Immunohistochemical and biochemical analyses of 20,000-25,000-year-old fossil cartilage. Eur. J. Biochem. 1995, 234, 125-131.
-
(1995)
Eur. J. Biochem
, vol.234
, pp. 125-131
-
-
Franc, S.1
Marzin, E.2
Boutillon, M.M.3
Lafont, R.4
Lechéne de la Porte, P.5
Herbage, D.6
-
15
-
-
34247375985
-
Protein sequences from mastodon and Tyrannosaurus rex revealed by mass spectrometry
-
Asara, J.M.; Schweitzer, M.H.; Freimark, L.M.; Phillips, M.; Cantley, L.C. Protein sequences from mastodon and Tyrannosaurus rex revealed by mass spectrometry. Science 2007, 316, 280-285.
-
(2007)
Science
, vol.316
, pp. 280-285
-
-
Asara, J.M.1
Schweitzer, M.H.2
Freimark, L.M.3
Phillips, M.4
Cantley, L.C.5
-
16
-
-
65549134251
-
Biomolecular characterization and protein sequences of the Campanian hadrosaur B. canadensis
-
Schweitzer, M.H.; Zheng, W.; Organ, C.L.; Avci, R.; Suo, Z.; Freimark, L.M.; Lebleu, V.S.; Duncan, M.B.; Vander Heiden, M.G.; Neveu, J.M.; Lane, W.S.; Cottrell, J.S.; Horner, J.R.; Cantley, L.C.; Kalluri, R.; Asara, J.M. Biomolecular characterization and protein sequences of the Campanian hadrosaur B. canadensis. Science 2009, 324, 626-631.
-
(2009)
Science
, vol.324
, pp. 626-631
-
-
Schweitzer, M.H.1
Zheng, W.2
Organ, C.L.3
Avci, R.4
Suo, Z.5
Freimark, L.M.6
Lebleu, V.S.7
Duncan, M.B.8
Vander Heiden, M.G.9
Neveu, J.M.10
Lane, W.S.11
Cottrell, J.S.12
Horner, J.R.13
Cantley, L.C.14
Kalluri, R.15
Asara, J.M.16
-
17
-
-
70349925705
-
Reanalysis of Tyrannosaurus rex Mass Spectra
-
Bern, M.; Phinney, B.S.; Goldberg, D. Reanalysis of Tyrannosaurus rex Mass Spectra. J. Proteome Res. 2009, 8, 4328-4332.
-
(2009)
J. Proteome Res
, vol.8
, pp. 4328-4332
-
-
Bern, M.1
Phinney, B.S.2
Goldberg, D.3
-
18
-
-
0242290312
-
Collagen XXIV, a vertebrate fibrillar collagen with structural features of invertebrate collagens: Selective expression in developing cornea and bone
-
Koch, M.; Laub, F.; Zhou, P.; Hahn, R.A.; Tanaka, S.; Burgeson, R.E.; Gerecke, D.R.; Ramirez, F.; Gordon, M.K. Collagen XXIV, a vertebrate fibrillar collagen with structural features of invertebrate collagens: selective expression in developing cornea and bone. J. Biol. Chem. 2003, 278, 43236-43244.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 43236-43244
-
-
Koch, M.1
Laub, F.2
Zhou, P.3
Hahn, R.A.4
Tanaka, S.5
Burgeson, R.E.6
Gerecke, D.R.7
Ramirez, F.8
Gordon, M.K.9
-
19
-
-
0041731789
-
A novel and highly conserved collagen [pro(α)1(XXVII)] with a unique expression pattern and unusual molecular characteristics establishes a new clade within the vertebrate fibrillar collagen family
-
Boot-Handford, R.P.; Tuckwell, D.S.; Plumb, D.A.; Rock, C.F.; Poulsom, R. A novel and highly conserved collagen [pro(α)1(XXVII)] with a unique expression pattern and unusual molecular characteristics establishes a new clade within the vertebrate fibrillar collagen family. J. Biol. Chem. 2003, 278, 31067-31077.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 31067-31077
-
-
Boot-Handford, R.P.1
Tuckwell, D.S.2
Plumb, D.A.3
Rock, C.F.4
Poulsom, R.5
-
20
-
-
0344088437
-
Identification, characterization and expression analysis of a new fibrillar collagen gene, COL27A1
-
Pace, J.M.; Corrado, M.; Missero, C.; Byers, P.H. Identification, characterization and expression analysis of a new fibrillar collagen gene, COL27A1. Matrix Biol. 2003, 22, 3-14.
-
(2003)
Matrix Biol
, vol.22
, pp. 3-14
-
-
Pace, J.M.1
Corrado, M.2
Missero, C.3
Byers, P.H.4
-
21
-
-
0028973138
-
Transglutaminase-catalyzed crosslinking of fibrils of collagen V/XI in A204 rhabdomyosarcoma cells
-
Kleman, J.P.; Aeschlimann, D.; Paulsson, M.; van der Rest, M. Transglutaminase-catalyzed crosslinking of fibrils of collagen V/XI in A204 rhabdomyosarcoma cells. Biochemistry 1995, 34, 13768-13775.
-
(1995)
Biochemistry
, vol.34
, pp. 13768-13775
-
-
Kleman, J.P.1
Aeschlimann, D.2
Paulsson, M.3
van der Rest, M.4
-
22
-
-
0018406331
-
Collagen heterogeneity in human cartilage: Identification of several new collagen chains
-
Burgeson, R.E.; Hollister, D.W. Collagen heterogeneity in human cartilage: identification of several new collagen chains. Biochem. Biophys. Res. Commun. 1979, 87, 1124-1131.
-
(1979)
Biochem. Biophys. Res. Commun
, vol.87
, pp. 1124-1131
-
-
Burgeson, R.E.1
Hollister, D.W.2
-
23
-
-
0019881757
-
Minor collagens of chicken hyaline cartilage
-
Reese, C.A.; Mayne, R. Minor collagens of chicken hyaline cartilage. Biochemistry 1981, 20, 5443-5448.
-
(1981)
Biochemistry
, vol.20
, pp. 5443-5448
-
-
Reese, C.A.1
Mayne, R.2
-
24
-
-
0031055069
-
Identification of the molecular recognition sequence which determines the type-specific assembly of procollagen
-
Lees, J.F.; Tasab, M.; Bulleid, N.J. Identification of the molecular recognition sequence which determines the type-specific assembly of procollagen. EMBO J. 1997, 16, 908-916.
-
(1997)
EMBO J
, vol.16
, pp. 908-916
-
-
Lees, J.F.1
Tasab, M.2
Bulleid, N.J.3
-
25
-
-
9144240550
-
Invertebrate data predict an early emergence of vertebrate fibrillar collagen clades and an anti-incest model
-
Aouacheria, A.; Cluzel, C.; Lethias, C.; Gouy, M.; Garrone, R.; Exposito, J.Y. Invertebrate data predict an early emergence of vertebrate fibrillar collagen clades and an anti-incest model. J. Biol. Chem. 2004, 279, 47711-47719.
-
(2004)
J. Biol. Chem
, vol.279
, pp. 47711-47719
-
-
Aouacheria, A.1
Cluzel, C.2
Lethias, C.3
Gouy, M.4
Garrone, R.5
Exposito, J.Y.6
-
26
-
-
0025813251
-
Biosynthesis and proteolytic processing of type XI collagen in embryonic chick sterna
-
Thom, J.R.; Morris, N.P. Biosynthesis and proteolytic processing of type XI collagen in embryonic chick sterna, J. Biol. Chem. 1991, 266, 7262-7269.
-
(1991)
J. Biol. Chem
, vol.266
, pp. 7262-7269
-
-
Thom, J.R.1
Morris, N.P.2
-
27
-
-
0027315418
-
2-terminal domain, a putative regulator of corneal fibrillogenesis
-
2-terminal domain, a putative regulator of corneal fibrillogenesis. J. Cell Biol. 1993, 121, 1181-1189.
-
(1993)
J. Cell Biol
, vol.121
, pp. 1181-1189
-
-
Linsenmayer, T.F.1
Gibney, E.2
Igoe, F.3
Gordon, M.K.4
Fitch, J.M.5
Fessler, L.I.6
Birk, D.E.7
-
28
-
-
34250314108
-
Collagen XXVII is developmentally regulated and forms thin fibrillar structures distinct from those of classical vertebrate fibrillar collagens
-
Plumb, D.A.; Dhir, V.; Mironov, A.; Ferrara, L.; Poulsom, R.; Kadler, K.E.; Thornton, D.J.; Briggs, M.D.; Boot-Handford, R.P. Collagen XXVII is developmentally regulated and forms thin fibrillar structures distinct from those of classical vertebrate fibrillar collagens. J. Biol. Chem. 2007, 282, 12791-12795.
-
(2007)
J. Biol. Chem
, vol.282
, pp. 12791-12795
-
-
Plumb, D.A.1
Dhir, V.2
Mironov, A.3
Ferrara, L.4
Poulsom, R.5
Kadler, K.E.6
Thornton, D.J.7
Briggs, M.D.8
Boot-Handford, R.P.9
-
29
-
-
34548540271
-
Type XXVII collagen at the transition of cartilage to bone during skeletogenesis
-
Hjorten, R.; Hansen, U.; Underwood, R.A.; Telfer, H.E.; Fernandes, R.J.; Krakow, D.; Sebald, E.; Wachsmann-Hogiu, S.; Bruckner, P.; Jacquet, R.; Landis, W.J.; Byers, P.H.; Pace, J.M. Type XXVII collagen at the transition of cartilage to bone during skeletogenesis. Bone 2007, 41, 535-542.
-
(2007)
Bone
, vol.41
, pp. 535-542
-
-
Hjorten, R.1
Hansen, U.2
Underwood, R.A.3
Telfer, H.E.4
Fernandes, R.J.5
Krakow, D.6
Sebald, E.7
Wachsmann-Hogiu, S.8
Bruckner, P.9
Jacquet, R.10
Landis, W.J.11
Byers, P.H.12
Pace, J.M.13
-
30
-
-
57649133947
-
Demosponge and sea anemone fibrillar collagen diversity reveals the early emergence of A/C clades and the maintenance of the modular structure of type V/XI collagens from sponge to human
-
Exposito, J.Y.; Larroux, C.; Cluzel, C.; Valcourt, U.; Lethias, C.; Degnan, B.M. Demosponge and sea anemone fibrillar collagen diversity reveals the early emergence of A/C clades and the maintenance of the modular structure of type V/XI collagens from sponge to human. J. Biol. Chem. 2008, 283, 28226-28235.
-
(2008)
J. Biol. Chem
, vol.283
, pp. 28226-28235
-
-
Exposito, J.Y.1
Larroux, C.2
Cluzel, C.3
Valcourt, U.4
Lethias, C.5
Degnan, B.M.6
-
31
-
-
0026800888
-
Novel amino-terminal propeptide configuration in a fibrillar procollagen undergoing alternative splicing
-
Exposito, J.Y.; D'Alessio, M.; Ramirez, F. Novel amino-terminal propeptide configuration in a fibrillar procollagen undergoing alternative splicing. J. Biol. Chem. 1992, 267, 17404-17408.
-
(1992)
J. Biol. Chem
, vol.267
, pp. 17404-17408
-
-
Exposito, J.Y.1
D'Alessio, M.2
Ramirez, F.3
-
32
-
-
1642342687
-
Distinct maturations of N-propeptide domains in fibrillar procollagen molecules involved in the formation of heterotypic fibrils in adult sea urchin collagenous tissues
-
Cluzel, C.; Lethias, C.; Garrone, R.; Exposito, J.Y. Distinct maturations of N-propeptide domains in fibrillar procollagen molecules involved in the formation of heterotypic fibrils in adult sea urchin collagenous tissues. J. Biol. Chem. 2004, 279, 9811-9817.
-
(2004)
J. Biol. Chem
, vol.279
, pp. 9811-9817
-
-
Cluzel, C.1
Lethias, C.2
Garrone, R.3
Exposito, J.Y.4
-
33
-
-
0026636614
-
Sea urchin collagen evolutionarily homologous to vertebrate pro-α2(I) collagen
-
Exposito, J.Y.; D'Alessio, M.; Solursh, M.; Ramirez, F. Sea urchin collagen evolutionarily homologous to vertebrate pro-α2(I) collagen. J. Biol. Chem. 1992, 267, 15559-15562.
-
(1992)
J. Biol. Chem
, vol.267
, pp. 15559-15562
-
-
Exposito, J.Y.1
D'Alessio, M.2
Solursh, M.3
Ramirez, F.4
-
34
-
-
0031154857
-
Comparative analysis of fibrillar and basement membrane collagen expression in embryos of the sea urchin, Strongylocentrotus purpuratus
-
Suzuki, H.R.; Reiter, R.S.; D'Alessio, M.; Di Liberto, M.; Ramirez, F.; Exposito, J.Y.; Gambino, R.; Solursh, M. Comparative analysis of fibrillar and basement membrane collagen expression in embryos of the sea urchin, Strongylocentrotus purpuratus. Zoolog. Sci. 1997, 14, 449-454.
-
(1997)
Zoolog. Sci
, vol.14
, pp. 449-454
-
-
Suzuki, H.R.1
Reiter, R.S.2
D'Alessio, M.3
Di Liberto, M.4
Ramirez, F.5
Exposito, J.Y.6
Gambino, R.7
Solursh, M.8
-
35
-
-
0023142864
-
COOH-terminal propeptides of the major human procollagens. Structural, functional and genetic comparisons
-
Dion, A.S.; Myers, J.C. COOH-terminal propeptides of the major human procollagens. Structural, functional and genetic comparisons. J. Mol. Biol. 1987, 193, 127-143.
-
(1987)
J. Mol. Biol
, vol.193
, pp. 127-143
-
-
Dion, A.S.1
Myers, J.C.2
-
36
-
-
0037321822
-
Fibrillar collagen: The key to vertebrate evolution? A tale of molecular incest
-
Boot-Handford, R.P.; Tuckwell, D.S. Fibrillar collagen: the key to vertebrate evolution? A tale of molecular incest. Bioessays 2003, 25, 142-151.
-
(2003)
Bioessays
, vol.25
, pp. 142-151
-
-
Boot-Handford, R.P.1
Tuckwell, D.S.2
-
37
-
-
0019126260
-
The collagen gene: Evidence for its evolutinary assembly by amplification of a DNA segment containing an exon of 54 bp
-
Yamada, Y.; Avvedimento, V.E.; Mudryj, M.; Ohkubo, H.; Vogeli, G.; Irani, M.; Pastan, I.; de Crombrugghe, B. The collagen gene: evidence for its evolutinary assembly by amplification of a DNA segment containing an exon of 54 bp. Cell 1980, 22, 887-892.
-
(1980)
Cell
, vol.22
, pp. 887-892
-
-
Yamada, Y.1
Avvedimento, V.E.2
Mudryj, M.3
Ohkubo, H.4
Vogeli, G.5
Irani, M.6
Pastan, I.7
de Crombrugghe, B.8
-
38
-
-
0027327007
-
The complete intron/exon structure of Ephydatia mülleri fibrillar collagen gene suggests a mechanism for the evolution of an ancestral gene module
-
Exposito, J.Y.; van der Rest, M.; Garrone, R. The complete intron/exon structure of Ephydatia mülleri fibrillar collagen gene suggests a mechanism for the evolution of an ancestral gene module. J. Mol. Evol. 1993, 37, 254-259.
-
(1993)
J. Mol. Evol
, vol.37
, pp. 254-259
-
-
Exposito, J.Y.1
van der Rest, M.2
Garrone, R.3
-
39
-
-
0028858686
-
Complete structural organization of the human α1(V) collagen gene (COL5A1): Divergence from the conserved organization of other characterized fibrillar collagen genes
-
Takahara, K.; Hoffman, G.G.; Greenspan, D.S. Complete structural organization of the human α1(V) collagen gene (COL5A1): divergence from the conserved organization of other characterized fibrillar collagen genes. Genomics 1995, 29, 588-597.
-
(1995)
Genomics
, vol.29
, pp. 588-597
-
-
Takahara, K.1
Hoffman, G.G.2
Greenspan, D.S.3
-
40
-
-
0029143703
-
The human COL11A2 gene structure indicates that the gene has not evolved with the genes for the major fibrillar collagens
-
Vuoristo, M.M.; Pihlajamaa, T.; Vandenberg, P.; Prockop, D.J.; Ala-Kokko, L. The human COL11A2 gene structure indicates that the gene has not evolved with the genes for the major fibrillar collagens. J. Biol. Chem. 1995, 270, 22873-22881.
-
(1995)
J. Biol. Chem
, vol.270
, pp. 22873-22881
-
-
Vuoristo, M.M.1
Pihlajamaa, T.2
Vandenberg, P.3
Prockop, D.J.4
Ala-Kokko, L.5
-
41
-
-
0034233877
-
Tracing the evolution of vertebrate fibrillar collagens from an ancestral α chain
-
Exposito, J.Y.; Cluzel, C.; Lethias, C.; Garrone, R. Tracing the evolution of vertebrate fibrillar collagens from an ancestral α chain. Matrix Biol. 2000, 19, 275-279.
-
(2000)
Matrix Biol
, vol.19
, pp. 275-279
-
-
Exposito, J.Y.1
Cluzel, C.2
Lethias, C.3
Garrone, R.4
-
42
-
-
0022366555
-
Jellyfish mesogloea collagen. Characterization of molecules as α1α2α3 heterotrimers
-
Miura, S.; Kimura S. Jellyfish mesogloea collagen. Characterization of molecules as α1α2α3 heterotrimers. J. Biol. Chem. 1985, 260, 15352-15356.
-
(1985)
J. Biol. Chem
, vol.260
, pp. 15352-15356
-
-
Miura, S.1
Kimura, S.2
-
43
-
-
0029878997
-
The evolution of fibrillar collagens: A sea-pen collagen shares common features with vertebrate type V collagen
-
Tillet, E.; Franc, J.M.; Franc, S.; Garrone, R. The evolution of fibrillar collagens: a sea-pen collagen shares common features with vertebrate type V collagen. Comp. Biochem. Physiol. B: Biochem. Mol. Biol. 1996, 113, 239-246.
-
(1996)
Comp. Biochem. Physiol. B: Biochem. Mol. Biol
, vol.113
, pp. 239-246
-
-
Tillet, E.1
Franc, J.M.2
Franc, S.3
Garrone, R.4
-
44
-
-
0030970733
-
Cloning of an annelid fibrillar-collagen gene and phylogenetic analysis of vertebrate and invertebrate collagens
-
Sicot, F.X.; Exposito, J.Y.; Masselot, M.; Garrone, R.; Deutsch, J.; Gaill, F. Cloning of an annelid fibrillar-collagen gene and phylogenetic analysis of vertebrate and invertebrate collagens. Eur. J. Biochem. 1997, 246, 50-58.
-
(1997)
Eur. J. Biochem
, vol.246
, pp. 50-58
-
-
Sicot, F.X.1
Exposito, J.Y.2
Masselot, M.3
Garrone, R.4
Deutsch, J.5
Gaill, F.6
-
45
-
-
33645769791
-
Large-scale trends in the evolution of gene structures within 11 animal genomes
-
Yandell, M.; Mungall, C.J.; Smith, C.; Prochnik, S.; Kaminker, J.; Hartzell, G.; Lewis, S.; Rubin, G. M. Large-scale trends in the evolution of gene structures within 11 animal genomes. PLoS Comput. Biol. 2006, 2, e15.
-
(2006)
PLoS Comput. Biol
, vol.2
-
-
Yandell, M.1
Mungall, C.J.2
Smith, C.3
Prochnik, S.4
Kaminker, J.5
Hartzell, G.6
Lewis, S.7
Rubin, G.M.8
-
46
-
-
15444379114
-
Resolution of a deep animal divergence by the pattern of intron conservation
-
Roy, S.W.; Gilbert, W. Resolution of a deep animal divergence by the pattern of intron conservation. Proc. Natl. Acad. Sci. USA 2005, 102, 4403-4408.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 4403-4408
-
-
Roy, S.W.1
Gilbert, W.2
-
47
-
-
46249118523
-
Extremely intron-rich genes in the alveolate ancestors inferred with a flexible maximum-likelihood approach
-
Csurös, M.; Rogozin, I.B.; Koonin, E.V. Extremely intron-rich genes in the alveolate ancestors inferred with a flexible maximum-likelihood approach. Mol. Biol. Evol. 2008, 25, 903-911.
-
(2008)
Mol. Biol. Evol
, vol.25
, pp. 903-911
-
-
Csurös, M.1
Rogozin, I.B.2
Koonin, E.V.3
-
48
-
-
41149095429
-
Spliceosomal introns as tools for genomic and evolutionary analysis
-
Irimia, M.; Roy, S.W. Spliceosomal introns as tools for genomic and evolutionary analysis. Nucleic Acids Res. 2008, 36, 1703-1712.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 1703-1712
-
-
Irimia, M.1
Roy, S.W.2
-
49
-
-
33750314083
-
-
Chevenet, F.; Brun, C.; Banuls, A.L.; Jacq, B.; Chisten, R. TreeDyn: Towards dynamic graphics and annotations for analyses of trees. BMC Bioinformatics 2006, 7, doi:10.1186/1471-2105-7-439.
-
Chevenet, F.; Brun, C.; Banuls, A.L.; Jacq, B.; Chisten, R. TreeDyn: Towards dynamic graphics and annotations for analyses of trees. BMC Bioinformatics 2006, 7, doi:10.1186/1471-2105-7-439.
-
-
-
-
50
-
-
34250377521
-
The collagens of hydra provide insight into the evolution of metazoan extracellular matrices
-
Zhang, X.; Boot-Handford, R.P.; Huxley-Jones, J.; Forse, L.N.; Mould, A.P.; Robertson, D.L.; Li, L.; Athiyal, M.; Sarras, M.P., Jr. The collagens of hydra provide insight into the evolution of metazoan extracellular matrices. J. Biol. Chem. 2007, 282, 6792-6802.
-
(2007)
J. Biol. Chem
, vol.282
, pp. 6792-6802
-
-
Zhang, X.1
Boot-Handford, R.P.2
Huxley-Jones, J.3
Forse, L.N.4
Mould, A.P.5
Robertson, D.L.6
Li, L.7
Athiyal, M.8
Sarras Jr., M.P.9
-
51
-
-
33244496489
-
Evolution and development of the chordates: Collagen and pharyngeal cartilage
-
Rychel, A.L.; Smith, S.E.; Shimamoto, H.T.; Swalla, B.J. Evolution and development of the chordates: collagen and pharyngeal cartilage. Mol. Biol. Evol. 2006, 23, 541-549.
-
(2006)
Mol. Biol. Evol
, vol.23
, pp. 541-549
-
-
Rychel, A.L.1
Smith, S.E.2
Shimamoto, H.T.3
Swalla, B.J.4
-
52
-
-
56949108356
-
-
DeSalle, R.; Schierwater, B. An even newer animal phylogeny. Bioessays 2008, 30, 1043-1047.
-
DeSalle, R.; Schierwater, B. An even "newer" animal phylogeny. Bioessays 2008, 30, 1043-1047.
-
-
-
-
53
-
-
53449101955
-
Genome duplication and the origin of the vertebrate skeleton
-
Zhang, G.; Cohn, M.J. Genome duplication and the origin of the vertebrate skeleton. Curr. Opin. Genet. Dev. 2008, 18, 387-393.
-
(2008)
Curr. Opin. Genet. Dev
, vol.18
, pp. 387-393
-
-
Zhang, G.1
Cohn, M.J.2
-
54
-
-
71749096592
-
Early evolution of metazoan transcription factors
-
Degnan, B.M.; Vervoort, M.; Larroux, C.; Richards, G.S. Early evolution of metazoan transcription factors. Curr. Opin. Genet. Dev. 2009, 19, 591-599.
-
(2009)
Curr. Opin. Genet. Dev
, vol.19
, pp. 591-599
-
-
Degnan, B.M.1
Vervoort, M.2
Larroux, C.3
Richards, G.S.4
-
55
-
-
67650116183
-
It's a long way from amphioxus: Descendants of the earliest chordate
-
Garcia-Fernàndez, J.; Benito-Gutiérrez, E. It's a long way from amphioxus: descendants of the earliest chordate. Bioessays 2009, 31, 665-675.
-
(2009)
Bioessays
, vol.31
, pp. 665-675
-
-
Garcia-Fernàndez, J.1
Benito-Gutiérrez, E.2
-
56
-
-
72749099971
-
Assessing the root of bilaterian animals with scalable phylogenomic methods
-
Hejnol, A.; Obst, M.; Stamatakis, A.; Ott, M.; Rouse, G.W.; Edgecombe, G.D.; Martinez, P.; Baguñà, J.; Bailly, X.; Jondelius, U.; Wiens, M.; Müller, W.E.; Seaver, E.; Wheeler, W.C.; Martindale, M.Q.; Giribet, G.; Dunn, C.W. Assessing the root of bilaterian animals with scalable phylogenomic methods. Proc. Biol. Sci. 2009, 276, 4261-4270.
-
(2009)
Proc. Biol. Sci
, vol.276
, pp. 4261-4270
-
-
Hejnol, A.1
Obst, M.2
Stamatakis, A.3
Ott, M.4
Rouse, G.W.5
Edgecombe, G.D.6
Martinez, P.7
Baguñà, J.8
Bailly, X.9
Jondelius, U.10
Wiens, M.11
Müller, W.E.12
Seaver, E.13
Wheeler, W.C.14
Martindale, M.Q.15
Giribet, G.16
Dunn, C.W.17
-
57
-
-
65249099546
-
Phylogenomics revives traditional views on deep animal relationships
-
Philippe, H.; Derelle, R.; Lopez, P.; Pick, K.; Borchiellini, C.; Boury-Esnault, N.; Vacelet, J.; Renard, E.; Houliston, E.; Quéinnec, E.; Da Silva, C.; Wincker, P.; Le Guyader, H.; Leys, S.; Jackson, D.J.; Schreiber, F.; Erpenbeck, D.; Morgenstern, B.; Wörheide, G.; Manuel, M. Phylogenomics revives traditional views on deep animal relationships. Curr. Biol. 2009, 19, 706-712.
-
(2009)
Curr. Biol
, vol.19
, pp. 706-712
-
-
Philippe, H.1
Derelle, R.2
Lopez, P.3
Pick, K.4
Borchiellini, C.5
Boury-Esnault, N.6
Vacelet, J.7
Renard, E.8
Houliston, E.9
Quéinnec, E.10
Da Silva, C.11
Wincker, P.12
Le Guyader, H.13
Leys, S.14
Jackson, D.J.15
Schreiber, F.16
Erpenbeck, D.17
Morgenstern, B.18
Wörheide, G.19
Manuel, M.20
more..
-
58
-
-
70349325524
-
The evolutionary significance of ancient genome duplications
-
van de Peer, Y.; Maere, S.; Meyer, A. The evolutionary significance of ancient genome duplications. Nat. Rev. Genet. 2009, 10, 725-732.
-
(2009)
Nat. Rev. Genet
, vol.10
, pp. 725-732
-
-
van de Peer, Y.1
Maere, S.2
Meyer, A.3
-
59
-
-
0023108277
-
The proα2(V) collagen gene is evolutionarily related to the major fibrillar-forming collagens
-
Weil, D.; Bernard, M.; Gargano, S.; Ramirez, F. The proα2(V) collagen gene is evolutionarily related to the major fibrillar-forming collagens. Nucleic Acids Res. 1987, 15, 181-198.
-
(1987)
Nucleic Acids Res
, vol.15
, pp. 181-198
-
-
Weil, D.1
Bernard, M.2
Gargano, S.3
Ramirez, F.4
-
60
-
-
0023698769
-
Cloning and sequencing of pro-α1(XI) collagen cDNA demonstrates that type XI belongs to the fibrillar class of collagens and reveals that the expression of the gene is not restricted to cartilagenous tissue
-
Bernard, M.; Yoshioka, H.; Rodriguez, E.; van der Rest, M.; Kimura, T.; Ninomiya, Y.; Olsen, B.R.; Ramirez, F. Cloning and sequencing of pro-α1(XI) collagen cDNA demonstrates that type XI belongs to the fibrillar class of collagens and reveals that the expression of the gene is not restricted to cartilagenous tissue. J. Biol. Chem. 1988, 263, 17159-17166.
-
(1988)
J. Biol. Chem
, vol.263
, pp. 17159-17166
-
-
Bernard, M.1
Yoshioka, H.2
Rodriguez, E.3
van der Rest, M.4
Kimura, T.5
Ninomiya, Y.6
Olsen, B.R.7
Ramirez, F.8
-
61
-
-
0029893377
-
Type-III procollagen assembly in semi-intact cells: Chain association, nucleation and triple-helix folding do not require formation of inter-chain disulphide bonds but triple-helix nucleation does require hydroxylation
-
Bulleid, N.J.; Wilson, R.; Lees, J.F. Type-III procollagen assembly in semi-intact cells: chain association, nucleation and triple-helix folding do not require formation of inter-chain disulphide bonds but triple-helix nucleation does require hydroxylation. Biochem. J. 1996, 317, 195-202.
-
(1996)
Biochem. J
, vol.317
, pp. 195-202
-
-
Bulleid, N.J.1
Wilson, R.2
Lees, J.F.3
-
62
-
-
33644746226
-
Lamprey type II collagen and Sox9 reveal an ancient origin of the vertebrate collagenous skeleton
-
Zhang, G.; Miyamoto, M.M.; Cohn, M.J. Lamprey type II collagen and Sox9 reveal an ancient origin of the vertebrate collagenous skeleton. Proc. Natl. Acad. Sci. USA 2006, 103, 3180-3185.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 3180-3185
-
-
Zhang, G.1
Miyamoto, M.M.2
Cohn, M.J.3
-
63
-
-
33750940805
-
Hagfish and lancelet fibrillar collagens reveal that type II collagen-based cartilage evolved in stem vertebrates
-
Zhang, G.; Cohn, M.J. Hagfish and lancelet fibrillar collagens reveal that type II collagen-based cartilage evolved in stem vertebrates. Proc. Natl. Acad. Sci. USA 2006, 103, 16829-16833.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 16829-16833
-
-
Zhang, G.1
Cohn, M.J.2
-
64
-
-
55949114174
-
Expression of Sox and fibrillar collagen genes in lamprey larval chondrogenesis with implications for the evolution of vertebrate cartilage
-
Ohtani, K.; Yao, T.; Kobayashi, M.; Kusakabe, R.; Kuratani, S.; Wada, H. Expression of Sox and fibrillar collagen genes in lamprey larval chondrogenesis with implications for the evolution of vertebrate cartilage. J. Exp. Zool. B: Mol. Dev. Evol. 2008, 310, 596-607.
-
(2008)
J. Exp. Zool. B: Mol. Dev. Evol
, vol.310
, pp. 596-607
-
-
Ohtani, K.1
Yao, T.2
Kobayashi, M.3
Kusakabe, R.4
Kuratani, S.5
Wada, H.6
-
65
-
-
0035039765
-
The unusual cartilaginous tissues of jawless craniates, cephalochordates and invertebrates
-
Wright, G.M.; Keeley, F.W.; Robson, P. The unusual cartilaginous tissues of jawless craniates, cephalochordates and invertebrates. Cell Tissue Res. 2001, 304, 165-174.
-
(2001)
Cell Tissue Res
, vol.304
, pp. 165-174
-
-
Wright, G.M.1
Keeley, F.W.2
Robson, P.3
-
66
-
-
57749184792
-
Timing of genome duplications relative to the origin of the vertebrates: Did cyclostomes diverge before or after?
-
Kuraku, S.; Meyer, A.; Kuratani, S. Timing of genome duplications relative to the origin of the vertebrates: did cyclostomes diverge before or after? Mol. Biol. Evol. 2009, 26, 47-59.
-
(2009)
Mol. Biol. Evol
, vol.26
, pp. 47-59
-
-
Kuraku, S.1
Meyer, A.2
Kuratani, S.3
-
67
-
-
56849126764
-
Insights into cyclostome phylogenomics: Pre-2R or post-2R
-
Kuraku, S. Insights into cyclostome phylogenomics: Pre-2R or post-2R. Zoolog. Sci. 2008, 25, 960-968.
-
(2008)
Zoolog. Sci
, vol.25
, pp. 960-968
-
-
Kuraku, S.1
-
69
-
-
50849145156
-
Collagen fibrillogenesis: Fibronectin, integrins, and minor collagens as organizers and nucleators
-
Kadler, K.E.; Hill, A.; Canty-Laird, E.G. Collagen fibrillogenesis: fibronectin, integrins, and minor collagens as organizers and nucleators. Curr. Opin. Cell Biol. 2008, 20, 495-501.
-
(2008)
Curr. Opin. Cell Biol
, vol.20
, pp. 495-501
-
-
Kadler, K.E.1
Hill, A.2
Canty-Laird, E.G.3
-
70
-
-
33744949552
-
Murine model of the Ehlers-Danlos syndrome. col5a1 haploinsufficiency disrupts collagen fibril assembly at multiple stages
-
Wenstrup, R.J.; Florer, J.B.; Davidson, J.M.; Phillips, C.L.; Pfeiffer B.J.; Menezes, D.W.; Chervoneva, I.; Birk, D.E. Murine model of the Ehlers-Danlos syndrome. col5a1 haploinsufficiency disrupts collagen fibril assembly at multiple stages. J. Biol. Chem. 2006, 281, 12888-12895.
-
(2006)
J. Biol. Chem
, vol.281
, pp. 12888-12895
-
-
Wenstrup, R.J.1
Florer, J.B.2
Davidson, J.M.3
Phillips, C.L.4
Pfeiffer, B.J.5
Menezes, D.W.6
Chervoneva, I.7
Birk, D.E.8
-
71
-
-
36549034372
-
Collagen XI chain misassembly in cartilage of the chondrodysplasia (cho) mouse
-
Fernandes, R.J.; Weis, M.; Scott, M.A.; Seegmiller, R.E.; Eyre, D.R. Collagen XI chain misassembly in cartilage of the chondrodysplasia (cho) mouse. Matrix Biol. 2007, 26, 597-603.
-
(2007)
Matrix Biol
, vol.26
, pp. 597-603
-
-
Fernandes, R.J.1
Weis, M.2
Scott, M.A.3
Seegmiller, R.E.4
Eyre, D.R.5
|