Regulation of SIVmac239 basal long terminal repeat activity and viral replication in macrophages: Functional roles of two CCAAT/enhancer-binding protein β sites in activation and interferon β-mediated suppression

Journal of Biological Chemistry

Volumn 285, Issue 4, 2010, Pages 2258-2273

  Ravimohan, Shruthi ^a   Gama, Lucio ^a   Barber, Sheila A ^a   Clements, Janice E ^a  

^a JOHNS HOPKINS UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BASAL LEVELS; CCAAT/ENHANCER-BINDING PROTEINS; CORE PROMOTERS; DIFFERENTIAL BINDING; DOWN-REGULATION; IN-CORE; INHIBITORY PROTEINS; ISOFORMS; LONG TERMINAL REPEATS; MEDIATED TRANSCRIPTION; RELATIVE BINDING; SIMIAN IMMUNODEFICIENCY VIRUS; VIRAL REPLICATION; VIRUS REPLICATION;

ANTIBIOTICS; BINDING ENERGY; GLYCOPROTEINS; MACROPHAGES; PROTEINS; TRANSCRIPTION; VIRUSES;

BINDING SITES;

BETA INTERFERON; CCAAT ENHANCER BINDING PROTEIN BETA; CYCLINE; LUCIFERASE; P27 ANTIGEN;

ARTICLE; BINDING KINETICS; BINDING SITE; CELL STRAIN HEK293; CONTROLLED STUDY; GENE EXPRESSION; GENETIC TRANSCRIPTION; HUMAN; HUMAN CELL; INHIBITION KINETICS; LONG TERMINAL REPEAT; MACROPHAGE; NONHUMAN; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN FUNCTION; REGULATORY MECHANISM; SIGNAL TRANSDUCTION; SIMIAN IMMUNODEFICIENCY VIRUS; VIRUS CELL INTERACTION; VIRUS LATENCY; VIRUS REPLICATION; ANIMAL; CELL LINE; CYTOLOGY; GENETIC TRANSFECTION; GENETICS; GROWTH, DEVELOPMENT AND AGING; IMMUNOLOGY; KIDNEY; MACACA; METABOLISM; PHYSIOLOGY; TRANSCRIPTION INITIATION; VIROLOGY; VIRUS ENCEPHALITIS;

HUMAN IMMUNODEFICIENCY VIRUS 1; SIMIAN IMMUNODEFICIENCY VIRUS;

ANIMALS; CCAAT-ENHANCER-BINDING PROTEIN-BETA; CELL LINE; ENCEPHALITIS, VIRAL; HUMANS; INTERFERON-BETA; KIDNEY; LUCIFERASES; MACACA MULATTA; MACROPHAGES; PROLIFERATING CELL NUCLEAR ANTIGEN; PROMOTER REGIONS, GENETIC; SIMIAN IMMUNODEFICIENCY VIRUS; TERMINAL REPEAT SEQUENCES; TRANSCRIPTIONAL ACTIVATION; TRANSFECTION; VIRUS LATENCY; VIRUS REPLICATION;

EID: 77449130410     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M109.075929     Document Type: Article

References (75)

1. An, S. F., Groves, M., Gray, F., and Scaravilli, F. (1999) J. Neuropathol. Exp. Neurol. 58, 1156-1162
2. Davis, L. E., Hjelle, B. L., Miller, V. E., Palmer, D. L., Llewellyn, A. L., Merlin, T. L., Young, S. A., Mills, R. G., Wachsman, W., and Wiley, C. A. (1992) Neurology 42, 1736-1739
3. Clements, J. E., Babas, T., Mankowski, J. L., Suryanarayana, K., Piatak, M., Jr., Tarwater, P. M., Lifson, J. D., and Zink, M. C. (2002) J. Infect. Dis. 186, 905-913
4. Barber, S. A., Gama, L., Dudaronek, J. M., Voelker, T., Tarwater, P. M., and Clements, J. E. (2006) J. Infect. Dis. 193, 963-970
5. Barber, S. A., Herbst, D. S., Bullock, B. T., Gama, L., and Clements, J. E. (2004) J. Neurovirol. 10, Suppl. 1, 15-20
6. Griffin, D. E. (2003) Nat. Rev. Immunol. 3, 493-502
7. Honda, Y., Rogers, L., Nakata, K., Zhao, B. Y., Pine, R., Nakai, Y., Kurosu, K., Rom, W. N., and Weiden, M. (1998) J. Exp. Med. 188, 1255-1265
8. Kornbluth, R. S., Oh, P. S., Munis, J. R., Cleveland, P. H., and Richman, D. D. (1989) J. Exp. Med. 169, 1137-1151
9. Williams, K., Alvarez, X., and Lackner, A. A. (2001) Glia 36, 156-164
10. Weiden, M., Tanaka, N., Qiao, Y., Zhao, B. Y., Honda, Y., Nakata, K., Canova, A., Levy, D. E., Rom, W. N., and Pine, R. (2000) J. Immunol. 165, 2028-2039
11. Akira, S., Isshiki, H., Sugita, T., Tanabe, O., Kinoshita, S., Nishio, Y., Nakajima, T., Hirano, T., and Kishimoto, T. (1990) EMBO J. 9, 1897-1906
12. Cao, Z., Umek, R. M., and McKnight, S. L. (1991) Genes Dev. 5, 1538-1552
13. Vinson, C. R., Sigler, P. B., and McKnight, S. L. (1989) Science 246, 911-916
14. Descombes, P., and Schibler, U. (1991) Cell 67, 569-579
15. Lee, E. S., Sarma, D., Zhou, H., and Henderson, A. J. (2002) Virology 299, 20-31
16. Mink, S., Haenig, B., and Klempnauer, K. H. (1997) Mol. Cell. Biol. 17, 6609-6617
17. Li, Y., Bevilacqua, E., Chiribau, C. B., Majumder, M., Wang, C., Croniger, C. M., Snider, M. D., Johnson, P. F., and Hatzoglou, M. (2008) J. Biol. Chem. 283, 22443-22456
18. Henderson, A. J., Zou, X., and Calame, K. L. (1995) J. Virol. 69, 5337-5344
19. Henderson, A. J., Connor, R. I., and Calame, K. L. (1996) Immunity 5, 91-101
20. Henderson, A. J., and Calame, K. L. (1997) Proc. Natl. Acad. Sci. U.S.A. 94, 8714-8719
21. Nonnemacher, M. R., Hogan, T. H., Quiterio, S., Wigdahl, B., Henderson, A., and Krebs, F. C. (2003) Biomed. Pharmacother. 57, 34-40
22. Anderson, M. G., and Clements, J. E. (1992) Virology 191, 559-568
23. Anderson, M. G., and Clements, J. E. (1991) J. Virol. 65, 51-60
24. Roos, J. W., Maughan, M. F., Liao, Z., Hildreth, J. E., and Clements, J. E. (2000) Virology 273, 307-315
25. Rue, S. M., Roos, J. W., Tarwater, P. M., Clements, J. E., and Barber, S. A. (2005) J. Virol. 79, 2484-2492
26. Flaherty, M. T., Hauer, D. A., Mankowski, J. L., Zink, M. C., and Clements, J. E. (1997) J. Virol. 71, 5790-5798
27. Gama, L., and Breitwieser, G. E. (2002) Methods Mol. Biol. 182, 77-83
28. Rue, S. M., Roos, J. W., Amzel, L. M., Clements, J. E., and Barber, S. A. (2003) J. Virol. 77, 8009-8018
29. Zink, M. C., Suryanarayana, K., Mankowski, J. L., Shen, A., Piatak, M., Jr., Spelman, J. P., Carter, D. L., Adams, R. J., Lifson, J. D., and Clements, J. E. (1999) J. Virol. 73, 10480-10488
30. Wright, E. K., Jr., Page, S. H., Barber, S. A., and Clements, J. E. (2008) Genes Immun. 9, 419-430
31. Osada, S., Yamamoto, H., Nishihara, T., and Imagawa, M. (1996) J. Biol. Chem. 271, 3891-3896
32. Lavrrar, J. L., and Farnham, P. J. (2004) J. Biol. Chem. 279, 46343-46349
33. Wells, J., and Farnham, P. J. (2002) Methods 26, 48-56
34. Sun, X. H., and Baltimore, D. (1991) Cell 64, 459-470
35. Muesing, M. A., Smith, D. H., and Capon, D. J. (1987) Cell 48, 691-701
36. Berkhout, B. (1992) Nucleic Acids Res. 20, 27-31
37. Centlivre, M., Klaver, B., Berkhout, B., and Das, A. T. (2008) J. Virol. 82, 9171-9178
38. Jakobovits, A., Smith, D. H., Jakobovits, E. B., and Capon, D. J. (1988) Mol. Cell. Biol. 8, 2555-2561
39. Gatignol, A., Buckler-White, A., Berkhout, B., and Jeang, K. T. (1991) Science 251, 1597-1600
40. Wei, P., Garber, M. E., Fang, S. M., Fischer, W. H., and Jones, K. A. (1998) Cell 92, 451-462
41. Mancebo, H. S., Lee, G., Flygare, J., Tomassini, J., Luu, P., Zhu, Y., Peng, J., Blau, C., Hazuda, D., Price, D., and Flores, O. (1997) Genes Dev. 11, 2633-2644
42. Piwien-Pilipuk, G., Van Mater, D., Ross, S. E., MacDougald, O. A., and Schwartz, J. (2001) J. Biol. Chem. 276, 19664-19671
43. Piwien Pilipuk, G., Galigniana, M. D., and Schwartz, J. (2003) J. Biol. Chem. 278, 35668-35677
44. Berberich-Siebelt, F., Berberich, I., Andrulis, M., Santner-Nanan, B., Jha, M. K., Klein-Hessling, S., Schimpl, A., and Serfling, E. (2006) J. Immunol. 176, 4843-4851
45. Schneider-Merck, T., Pohnke, Y., Kempf, R., Christian, M., Brosens, J. J., and Gellersen, B. (2006) J. Biol. Chem. 281, 269-278
46. Su, W. C., Chou, H. Y., Chang, C. J., Lee, Y. M., Chen, W. H., Huang, K. H., Lee, M. Y., and Lee, S. C. (2003) J. Biol. Chem. 278, 51150-51158
47. Dudaronek, J. M., Barber, S. A., and Clements, J. E. (2007) J. Immunol. 179, 7262-7269
48. Tesmer, V. M., and Bina, M. (1996) J. Mol. Biol. 262, 327-335
49. Nabel, G., and Baltimore, D. (1987) Nature 326, 711-713
50. Jones, K. A., Kadonaga, J. T., Luciw, P. A., and Tjian, R. (1986) Science 232, 755-759
51. Tesmer, V. M., Rajadhyaksha, A., Babin, J., and Bina, M. (1993) Proc. Natl. Acad. Sci. U.S.A. 90, 7298-7302
52. Gartner, S., and Popovic, M. (1990) AIDS Res. Hum. Retroviruses 6, 1017-1021
53. Gartner, S., Markovits, P., Markovitz, D. M., Betts, R. F., and Popovic, M. (1986) JAMA 256, 2365-2371
54. Fenrick, R., Malim, M. H., Hauber, J., Le, S. Y., Maizel, J., and Cullen, B. R. (1989) J. Virol. 63, 5006-5012
55. Ambrosino, C., Ruocco, M. R., Chen, X., Mallardo, M., Baudi, F., Trematerra, S., Quinto, I., Venuta, S., and Scala, G. (1997) J. Biol. Chem. 272, 14883-14892
56. Abraham, S., Sweet, T., Sawaya, B. E., Rappaport, J., Khalili, K., and Amini, S. (2005) J. Neuroimmunol. 160, 219-227
57. Coyle-Rink, J., Sweet, T., Abraham, S., Sawaya, B., Batuman, O., Khalili, K., and Amini, S. (2002) Virology 299, 240-247
58. Mameli, G., Deshmane, S. L., Ghafouri, M., Cui, J., Simbiri, K., Khalili, K., Mukerjee, R., Dolei, A., Amini, S., and Sawaya, B. E. (2007) J. Gen. Virol. 88, 631-640
59. Tissot, C., and Mechti, N. (1995) J. Biol. Chem. 270, 14891-14898
60. Barr, S. D., Smiley, J. R., and Bushman, F. D. (2008) PLoS Pathog. 4, e1000007
61. Peng, G., Lei, K. J., Jin, W., Greenwell-Wild, T., and Wahl, S. M. (2006) J. Exp. Med. 203, 41-46
62. Bouazzaoui, A., Kreutz, M., Eisert, V., Dinauer, N., Heinzelmann, A., Hallenberger, S., Strayle, J., Walker, R., Rübsamen-Waigmann, H., Andreesen, R., and von Briesen, H. (2006) Virology 356, 79-94
63. Samuel, C. E. (2001) Clin. Microbiol. Rev. 14, 778-809
64. Ryden, T. A., and Beemon, K. (1989) Mol. Cell. Biol. 9, 1155-1164
65. Carlberg, K., Ryden, T. A., and Beemon, K. (1988) J. Virol. 62, 1617-1624
66. Liu, C., Lu, J., Tan, J., Li, L., and Huang, B. (2004) Cytokine 27, 93-100
67. Lichtsteiner, S., Wuarin, J., and Schibler, U. (1987) Cell 51, 963-973
68. Ryden, T. A., de Mars, M., and Beemon, K. (1993) J. Virol. 67, 2862-2870
69. Witwer, K. W., L. Gama, M. Li, C. Bartizal, S. E. Queen, J. Varrone, A. Brice, D. R. Graham, J. L. Mankowski, M. C. Zink, and Clements, J. E. (2009) PLoS One, in press
70. Schwartz, C., Beck, K., Mink, S., Schmolke, M., Budde, B., Wenning, D., and Klempnauer, K. H. (2003) EMBO J. 22, 882-892
71. Poli, V., Mancini, F. P., and Cortese, R. (1990) Cell 63, 643-653
72. Kim, R. B., Fromm, M. F., Wandel, C., Leake, B., Wood, A. J., Roden, D. M., and Wilkinson, G. R. (1998) J. Clin. Invest. 101, 289-294
73. Aweeka, F., Jayewardene, A., Staprans, S., Bellibas, S. E., Kearney, B., Lizak, P., Novakovic-Agopian, T., and Price, R. W. (1999) J. Acquir. Immune Defic. Syndr. Hum. Retrovirol. 20, 39-43
74. Foudraine, N. A., Hoetelmans, R. M., Lange, J. M., de Wolf, F., van Benthem, B. H., Maas, J. J., Keet, I. P., and Portegies, P. (1998) Lancet 351, 1547-1551
75. Kravcik, S., Gallicano, K., Roth, V., Cassol, S., Hawley-Foss, N., Badley, A., and Cameron, D. W. (1999) J. Acquir. Immune Defic. Syndr. 21, 371-375