-
1
-
-
42449109972
-
Metabolic responses to pyruvate kinase deletion in lysine producing Corynebacterium glutamicum
-
Becker J, Klopprogge C, Wittmann C. Metabolic responses to pyruvate kinase deletion in lysine producing Corynebacterium glutamicum. Microb Cell Fact. 2008;7:8.
-
(2008)
Microb Cell Fact
, vol.7
, pp. 8
-
-
Becker, J.1
Klopprogge, C.2
Wittmann, C.3
-
2
-
-
29044444888
-
Comparative metabolic network analysis of two xylose fermenting recombinant Saccharomyces cerevisiae strains
-
Grotkjaer T, Christakopoulos P, Nielsen J, Olsson L. Comparative metabolic network analysis of two xylose fermenting recombinant Saccharomyces cerevisiae strains. Metab Eng. 2005;7:437-444.
-
(2005)
Metab Eng
, vol.7
, pp. 437-444
-
-
Grotkjaer, T.1
Christakopoulos, P.2
Nielsen, J.3
Olsson, L.4
-
3
-
-
44749095048
-
Alleviation of feedback inhibition in Saccharomyces cerevisiae aromatic amino acid biosynthesis: Quantification of metabolic impact
-
Luttik MA, Vuralhan Z, Suir E, Braus GH, Pronk JT, Daran JM. Alleviation of feedback inhibition in Saccharomyces cerevisiae aromatic amino acid biosynthesis: quantification of metabolic impact. Metab Eng. 2008;10:141-153.
-
(2008)
Metab Eng
, vol.10
, pp. 141-153
-
-
Luttik, M.A.1
Vuralhan, Z.2
Suir, E.3
Braus, G.H.4
Pronk, J.T.5
Daran, J.M.6
-
4
-
-
33846061120
-
Metabolic networks in motion: 13C-based flux analysis
-
Sauer U. Metabolic networks in motion: 13C-based flux analysis. Mol Syst Biol. 2006;2:62.
-
(2006)
Mol Syst Biol
, vol.2
, pp. 62
-
-
Sauer, U.1
-
6
-
-
0032753923
-
Metabolic flux ratio analysis of genetic and environmental modulations of Escherichia coli central carbon metabolism
-
Sauer U, Lasko DR, Fiaux J, Hochuli M, Glaser R, Szyperski T, Wuthrich K, Bailey JE. Metabolic flux ratio analysis of genetic and environmental modulations of Escherichia coli central carbon metabolism. J Bacteriol. 1999;181:6679-6688.
-
(1999)
J Bacteriol
, vol.181
, pp. 6679-6688
-
-
Sauer, U.1
Lasko, D.R.2
Fiaux, J.3
Hochuli, M.4
Glaser, R.5
Szyperski, T.6
Wuthrich, K.7
Bailey, J.E.8
-
7
-
-
33645870422
-
Production of the antimalarial drug precursor artemisinic acid in engineered yeast
-
Ro DK, Paradise EM, Ouellet M, Fisher KJ, Newman KL, Ndungu JM, Ho KA, Eachus RA, Ham TS, Kirby J, Chang MC, Withers ST, Shiba Y, Sarpong R, Keasling JD. Production of the antimalarial drug precursor artemisinic acid in engineered yeast. Nature. 2006;440:940-943.
-
(2006)
Nature
, vol.440
, pp. 940-943
-
-
Ro, D.K.1
Paradise, E.M.2
Ouellet, M.3
Fisher, K.J.4
Newman, K.L.5
Ndungu, J.M.6
Ho, K.A.7
Eachus, R.A.8
Ham, T.S.9
Kirby, J.10
Chang, M.C.11
Withers, S.T.12
Shiba, Y.13
Sarpong, R.14
Keasling, J.D.15
-
8
-
-
53049083876
-
Metabolic engineering for advanced biofuels production from Escherichia coli
-
Atsumi S, Liao JC. Metabolic engineering for advanced biofuels production from Escherichia coli. Curr Opin Biotechnol. 2008; 19:414-419.
-
(2008)
Curr Opin Biotechnol
, vol.19
, pp. 414-419
-
-
Atsumi, S.1
Liao, J.C.2
-
9
-
-
33845675054
-
Determination of metabolic flux changes during fed-batch cultivation from measurements of intracellular amino acids by LC-MS/MS
-
Iwatani S, Van Dien S, Shimbo K, Kubota K, Kageyama N, Iwahata D, Miyano H, Hirayama K, Usuda Y, Shimizu K, Matsui K. Determination of metabolic flux changes during fed-batch cultivation from measurements of intracellular amino acids by LC-MS/MS. J Biotechnol. 2007;128:93-111.
-
(2007)
J Biotechnol
, vol.128
, pp. 93-111
-
-
Iwatani, S.1
van Dien, S.2
Shimbo, K.3
Kubota, K.4
Kageyama, N.5
Iwahata, D.6
Miyano, H.7
Hirayama, K.8
Usuda, Y.9
Shimizu, K.10
Matsui, K.11
-
10
-
-
34447276204
-
Direct measurement of isotopomer of intracellular metabolites using capillary electrophoresis time-of-flight mass spectrometry for efficient metabolic flux analysis
-
Toya Y, Ishii N, Hirasawa T, Naba M, Hirai K, Sugawara K, Igarashi S, Shimizu K, Tomita M, Soga T. Direct measurement of isotopomer of intracellular metabolites using capillary electrophoresis time-of-flight mass spectrometry for efficient metabolic flux analysis. J Chromatogr A. 2007;1159:134-141.
-
(2007)
J Chromatogr A
, vol.1159
, pp. 134-141
-
-
Toya, Y.1
Ishii, N.2
Hirasawa, T.3
Naba, M.4
Hirai, K.5
Sugawara, K.6
Igarashi, S.7
Shimizu, K.8
Tomita, M.9
Soga, T.10
-
11
-
-
34249088019
-
Sampling for metabolome analysis of microorganisms
-
Bolten CJ, Kiefer P, Letisse F, Portais JC, Wittmann C. Sampling for metabolome analysis of microorganisms. Anal Chem. 2007;79:3843-3849.
-
(2007)
Anal Chem
, vol.79
, pp. 3843-3849
-
-
Bolten, C.J.1
Kiefer, P.2
Letisse, F.3
Portais, J.C.4
Wittmann, C.5
-
12
-
-
28044440100
-
Global metabolite analysis of yeast: Evaluation of sample preparation methods
-
Villas-Boas SG, Hojer-Pedersen J, Akesson M, Smedsgaard J, Nielsen J. Global metabolite analysis of yeast: evaluation of sample preparation methods. Yeast. 2005;22:1155-1169.
-
(2005)
Yeast
, vol.22
, pp. 1155-1169
-
-
Villas-Boas, S.G.1
Hojer-Pedersen, J.2
Akesson, M.3
Smedsgaard, J.4
Nielsen, J.5
-
13
-
-
42349111860
-
Global metabolic profiling of Escherichia coli cultures: An evaluation of methods for quenching and extraction of intracellular metabolites
-
Winder CL, Dunn WB, Schuler S, Broadhurst D, Jarvis R, Stephens GM, Goodacre R. Global metabolic profiling of Escherichia coli cultures: an evaluation of methods for quenching and extraction of intracellular metabolites. Anal Chem. 2008;80: 2939-2948.
-
(2008)
Anal Chem
, vol.80
, pp. 2939-2948
-
-
Winder, C.L.1
Dunn, W.B.2
Schuler, S.3
Broadhurst, D.4
Jarvis, R.5
Stephens, G.M.6
Goodacre, R.7
-
14
-
-
1642374638
-
Impact of the cold shock phenomenon on quantification of intracellular metabolites in bacteria
-
Wittmann C, Kromer JO, Kiefer P, Binz T, Heinzle E. Impact of the cold shock phenomenon on quantification of intracellular metabolites in bacteria. Anal Biochem. 2004;327:135-139.
-
(2004)
Anal Biochem
, vol.327
, pp. 135-139
-
-
Wittmann, C.1
Kromer, J.O.2
Kiefer, P.3
Binz, T.4
Heinzle, E.5
-
15
-
-
58349085312
-
Development and application of a differential method for reliable metabolome analysis in Escherichia coli
-
Taymaz-Nikerel H, de Mey M, Ras C, ten Pierick A, Seifar RM, van Dam JC, Heijnen JJ, van Gulik WM. Development and application of a differential method for reliable metabolome analysis in Escherichia coli. Anal Biochem. 2009;386:9-19.
-
(2009)
Anal Biochem
, vol.386
, pp. 9-19
-
-
Taymaz-Nikerel, H.1
de Mey, M.2
Ras, C.3
ten Pierick, A.4
Seifar, R.M.5
van Dam, J.C.6
Heijnen, J.J.7
van Gulik, W.M.8
-
16
-
-
38849088087
-
Isotopomer distributions in amino acids from a highly expressed protein as a proxy for those from total protein
-
Shaikh AS, Tang YJ, Mukhopadhyay A, Keasling JD. Isotopomer distributions in amino acids from a highly expressed protein as a proxy for those from total protein. Anal Chem. 2008;80:886-890.
-
(2008)
Anal Chem
, vol.80
, pp. 886-890
-
-
Shaikh, A.S.1
Tang, Y.J.2
Mukhopadhyay, A.3
Keasling, J.D.4
-
18
-
-
33846561094
-
Anaerobic central metabolic pathways in Shewanella oneidensis MR-1 reinterpreted in the light of isotopic metabolite labeling
-
Tang YJ, Meadows AL, Kirby J, Keasling JD. Anaerobic central metabolic pathways in Shewanella oneidensis MR-1 reinterpreted in the light of isotopic metabolite labeling. J Bacteriol. 2007;189:894-901.
-
(2007)
J Bacteriol
, vol.189
, pp. 894-901
-
-
Tang, Y.J.1
Meadows, A.L.2
Kirby, J.3
Keasling, J.D.4
-
19
-
-
0842343470
-
New tools for mass isotopomer data evaluation in 13C flux analysis: Mass isotope correction, data consistency checking, and precursor relationships
-
Wahl SA, Dauner M, Wiechert W. New tools for mass isotopomer data evaluation in 13C flux analysis: mass isotope correction, data consistency checking, and precursor relationships. Biotechnol Bioeng. 2004;85:259-268.
-
(2004)
Biotechnol Bioeng
, vol.85
, pp. 259-268
-
-
Wahl, S.A.1
Dauner, M.2
Wiechert, W.3
-
20
-
-
60549117294
-
Metabolic flux analysis of Shewanella spp. reveals evolutionary robustness in central carbon metabolism
-
Tang YJ, Martin HG, Dehal PS, Deutschbauer A, Llora X, Meadows A, Arkin A, Keasling JD. Metabolic flux analysis of Shewanella spp. reveals evolutionary robustness in central carbon metabolism. Biotechnol Bioeng. 2009;102:1161-1169.
-
(2009)
Biotechnol Bioeng
, vol.102
, pp. 1161-1169
-
-
Tang, Y.J.1
Martin, H.G.2
Dehal, P.S.3
Deutschbauer, A.4
Llora, X.5
Meadows, A.6
Arkin, A.7
Keasling, J.D.8
-
21
-
-
0034741983
-
13C metabolic flux analysis
-
Wiechert W. 13C metabolic flux analysis. Metab Eng. 2001; 3:195-206.
-
(2001)
Metab Eng
, vol.3
, pp. 195-206
-
-
Wiechert, W.1
-
22
-
-
0031594984
-
13C-NMR, MS and metabolic flux balancing in biotechnology research
-
Szyperski T. 13C-NMR, MS and metabolic flux balancing in biotechnology research. Q Rev Biophys. 1998;31:41-106.
-
(1998)
Q Rev Biophys
, vol.31
, pp. 41-106
-
-
Szyperski, T.1
-
23
-
-
47749087002
-
Analysis of 13C labeling enrichment in microbial culture applying metabolic tracer experiments using gas chromatography-combustion-isotope ratio mass spectrometry
-
Heinzle E, Yuan Y, Kumar S, Wittmann C, Gehre M, Richnow HH, Wehrung P, Adam P, Albrecht P. Analysis of 13C labeling enrichment in microbial culture applying metabolic tracer experiments using gas chromatography-combustion-isotope ratio mass spectrometry. Anal Biochem. 2008;380:202-210.
-
(2008)
Anal Biochem
, vol.380
, pp. 202-210
-
-
Heinzle, E.1
Yuan, Y.2
Kumar, S.3
Wittmann, C.4
Gehre, M.5
Richnow, H.H.6
Wehrung, P.7
Adam, P.8
Albrecht, P.9
-
24
-
-
17644369246
-
Impact of global transcriptional regulation by ArcA, ArcB, Cra, Crp, Cya, Fnr, and Mlc on glucose catabolism in Escherichia coli
-
Perrenoud A, Sauer U. Impact of global transcriptional regulation by ArcA, ArcB, Cra, Crp, Cya, Fnr, and Mlc on glucose catabolism in Escherichia coli. J Bacteriol. 2005;187:3171-3179.
-
(2005)
J Bacteriol
, vol.187
, pp. 3171-3179
-
-
Perrenoud, A.1
Sauer, U.2
|