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Volumn 6, Issue 1, 2010, Pages

VEZF1 elements mediate protection from DNA methylation

Author keywords

[No Author keywords available]

Indexed keywords

HISTONE; UNCLASSIFIED DRUG; UPSTREAM STIMULATORY FACTOR; VEZF1 PROTEIN; ZINC FINGER PROTEIN; BETA GLOBIN; DNA BINDING PROTEIN;

EID: 76749155779     PISSN: 15537390     EISSN: 15537404     Source Type: Journal    
DOI: 10.1371/journal.pgen.1000804     Document Type: Article
Times cited : (81)

References (47)
  • 1
    • 0026027982 scopus 로고
    • A position-effect assay for boundaries of higher order chromosomal domains
    • Kellum R, Schedl P (1991) A position-effect assay for boundaries of higher order chromosomal domains. Cell 64: 941-950.
    • (1991) Cell , vol.64 , pp. 941-950
    • Kellum, R.1    Schedl, P.2
  • 2
    • 0018867216 scopus 로고
    • Tissue-specific DNA cleavages in the globin chromatin domain introduced by DNAase I
    • Stalder J, Larsen A, Engel JD, Dolan M, Groudine M, et al. (1980) Tissue-specific DNA cleavages in the globin chromatin domain introduced by DNAase I. Cell 20: 451-460.
    • (1980) Cell , vol.20 , pp. 451-460
    • Stalder, J.1    Larsen, A.2    Engel, J.D.3    Dolan, M.4    Groudine, M.5
  • 3
    • 33747453473 scopus 로고    scopus 로고
    • Insulators: Exploiting transcriptional and epigenetic mechanisms
    • Gaszner M, Felsenfeld G (2006) Insulators: exploiting transcriptional and epigenetic mechanisms. Nat Rev Genet 7: 703-713.
    • (2006) Nat Rev Genet , vol.7 , pp. 703-713
    • Gaszner, M.1    Felsenfeld, G.2
  • 5
    • 35548990188 scopus 로고    scopus 로고
    • We gather together: Insulators and genome organization
    • Wallace JA, Felsenfeld G (2007) We gather together: insulators and genome organization. Curr Opin Genet Dev 17: 400-407.
    • (2007) Curr Opin Genet Dev , vol.17 , pp. 400-407
    • Wallace, J.A.1    Felsenfeld, G.2
  • 6
    • 17444369067 scopus 로고    scopus 로고
    • Remote control of gene transcription
    • West AG, Fraser P (2005) Remote control of gene transcription. Hum Mol Genet 14 Spec No 1: R101-111.
    • (2005) Hum Mol Genet , vol.14 , Issue.SPEC 1
    • West, A.G.1    Fraser, P.2
  • 7
    • 0036467996 scopus 로고    scopus 로고
    • Insulators: Many functions, many mechanisms
    • West AG, Gaszner M, Felsenfeld G (2002) Insulators: many functions, many mechanisms. Genes Dev 16: 271-288.
    • (2002) Genes Dev , vol.16 , pp. 271-288
    • West, A.G.1    Gaszner, M.2    Felsenfeld, G.3
  • 8
    • 0027254748 scopus 로고
    • A 5′ element of the chicken beta-globin domain serves as an insulator in human erythroid cells and protects against position effect in Drosophila
    • Chung JH, Whiteley M, Felsenfeld G (1993) A 5′ element of the chicken beta-globin domain serves as an insulator in human erythroid cells and protects against position effect in Drosophila. Cell 74: 505-514.
    • (1993) Cell , vol.74 , pp. 505-514
    • Chung, J.H.1    Whiteley, M.2    Felsenfeld, G.3
  • 9
    • 0033529654 scopus 로고    scopus 로고
    • The protein CTCF is required for the enhancer blocking activity of vertebrate insulators
    • Bell AC, West AG, Felsenfeld G (1999) The protein CTCF is required for the enhancer blocking activity of vertebrate insulators. Cell 98: 387-396.
    • (1999) Cell , vol.98 , pp. 387-396
    • Bell, A.C.1    West, A.G.2    Felsenfeld, G.3
  • 10
    • 0032530174 scopus 로고    scopus 로고
    • Loss of transcriptional activity of a transgene is accompanied by DNA methylation and histone deacetylation and is prevented by insulators
    • Pikaart MJ, Recillas-Targa F, Felsenfeld G (1998) Loss of transcriptional activity of a transgene is accompanied by DNA methylation and histone deacetylation and is prevented by insulators. Genes Dev 12: 2852-2862.
    • (1998) Genes Dev , vol.12 , pp. 2852-2862
    • Pikaart, M.J.1    Recillas-Targa, F.2    Felsenfeld, G.3
  • 12
    • 0037076316 scopus 로고    scopus 로고
    • Position-effect protection and enhancer blocking by the chicken beta-globin insulator are separable activities
    • Recillas-Targa F, Pikaart MJ, Burgess-Beusse B, Bell AC, Litt MD, et al. (2002) Position-effect protection and enhancer blocking by the chicken beta-globin insulator are separable activities. Proc Natl Acad Sci U S A 99: 6883-6888.
    • (2002) Proc Natl Acad Sci U S A , vol.99 , pp. 6883-6888
    • Recillas-Targa, F.1    Pikaart, M.J.2    Burgess-Beusse, B.3    Bell, A.C.4    Litt, M.D.5
  • 14
    • 8644240108 scopus 로고    scopus 로고
    • Recruitment of histone modifications by USF proteins at a vertebrate barrier element
    • West AG, Huang S, Gaszner M, Litt MD, Felsenfeld G (2004) Recruitment of histone modifications by USF proteins at a vertebrate barrier element. Molecular Cell 16: 453-463.
    • (2004) Molecular Cell , vol.16 , pp. 453-463
    • West, A.G.1    Huang, S.2    Gaszner, M.3    Litt, M.D.4    Felsenfeld, G.5
  • 15
    • 36048976921 scopus 로고    scopus 로고
    • USF1 recruits histone modification complexes and is critical for maintenance of a chromatin barrier
    • Huang S, Li X, Yusufzai TM, Qiu Y, Felsenfeld G (2007) USF1 recruits histone modification complexes and is critical for maintenance of a chromatin barrier. Mol Cell Biol 27: 7991-8002.
    • (2007) Mol Cell Biol , vol.27 , pp. 7991-8002
    • Huang, S.1    Li, X.2    Yusufzai, T.M.3    Qiu, Y.4    Felsenfeld, G.5
  • 16
    • 0037098039 scopus 로고    scopus 로고
    • The barrier function of an insulator couples high histone acetylation levels with specific protection of promoter DNA from methylation
    • Mutskov VJ, Farrell CM, Wade PA, Wolffe AP, Felsenfeld G (2002) The barrier function of an insulator couples high histone acetylation levels with specific protection of promoter DNA from methylation. Genes Dev 16: 1540-1554.
    • (2002) Genes Dev , vol.16 , pp. 1540-1554
    • Mutskov, V.J.1    Farrell, C.M.2    Wade, P.A.3    Wolffe, A.P.4    Felsenfeld, G.5
  • 17
    • 37249055565 scopus 로고    scopus 로고
    • The cHS4 chromatin insulator reduces gammaretroviral vector silencing by epigenetic modifications of integrated provirus
    • Li CL, Emery DW (2008) The cHS4 chromatin insulator reduces gammaretroviral vector silencing by epigenetic modifications of integrated provirus. Gene Ther 15: 49-53.
    • (2008) Gene Ther , vol.15 , pp. 49-53
    • Li, C.L.1    Emery, D.W.2
  • 18
    • 0842307061 scopus 로고    scopus 로고
    • Silencing of transgene transcription precedes methylation of promoter DNA and histone H3 lysine 9
    • Mutskov V, Felsenfeld G (2004) Silencing of transgene transcription precedes methylation of promoter DNA and histone H3 lysine 9. Embo J 23: 138-149.
    • (2004) Embo J , vol.23 , pp. 138-149
    • Mutskov, V.1    Felsenfeld, G.2
  • 19
    • 0035914299 scopus 로고    scopus 로고
    • Vezf1/DB1 is an endothelial cell-specific transcription factor that regulates expression of the endothelin-1 promoter
    • Aitsebaomo J, Kingsley-Kallesen ML, Wu Y, Quertermous T, Patterson C (2001) Vezf1/DB1 is an endothelial cell-specific transcription factor that regulates expression of the endothelin-1 promoter. J Biol Chem 276: 39197-39205.
    • (2001) J Biol Chem , vol.276 , pp. 39197-39205
    • Aitsebaomo, J.1    Kingsley-Kallesen, M.L.2    Wu, Y.3    Quertermous, T.4    Patterson, C.5
  • 20
    • 0028145330 scopus 로고
    • Molecular cloning of a novel human cDNA encoding a zinc finger protein that binds to the interleukin-3 promoter
    • Koyano-Nakagawa N, Nishida J, Baldwin D, Arai K, Yokota T (1994) Molecular cloning of a novel human cDNA encoding a zinc finger protein that binds to the interleukin-3 promoter. Mol Cell Biol 14: 5099-5107.
    • (1994) Mol Cell Biol , vol.14 , pp. 5099-5107
    • Koyano-Nakagawa, N.1    Nishida, J.2    Baldwin, D.3    Arai, K.4    Yokota, T.5
  • 21
    • 0024046157 scopus 로고
    • An erythrocyte-specific protein that binds to the poly(dG) region of the chicken beta-globin gene promoter
    • Lewis CD, Clark SP, Felsenfeld G, Gould H (1988) An erythrocyte-specific protein that binds to the poly(dG) region of the chicken beta-globin gene promoter. Genes Dev 2: 863-873.
    • (1988) Genes Dev , vol.2 , pp. 863-873
    • Lewis, C.D.1    Clark, S.P.2    Felsenfeld, G.3    Gould, H.4
  • 22
    • 0027290554 scopus 로고
    • The erythroid protein cGATA-1 functions with a stage-specific factor to activate transcription of chromatin-assembled beta-globin genes
    • Barton MC, Madani N, Emerson BM (1993) The erythroid protein cGATA-1 functions with a stage-specific factor to activate transcription of chromatin-assembled beta-globin genes. Genes Dev 7: 1796-1809.
    • (1993) Genes Dev , vol.7 , pp. 1796-1809
    • Barton, M.C.1    Madani, N.2    Emerson, B.M.3
  • 23
    • 0026036366 scopus 로고
    • The promoter and enhancer of the inactive chicken beta-globin gene contains precisely positioned nucleosomes
    • Buckle R, Balmer M, Yenidunya A, Allan J (1991) The promoter and enhancer of the inactive chicken beta-globin gene contains precisely positioned nucleosomes. Nucleic Acids Res 19: 1219-1226.
    • (1991) Nucleic Acids Res , vol.19 , pp. 1219-1226
    • Buckle, R.1    Balmer, M.2    Yenidunya, A.3    Allan, J.4
  • 24
    • 0024848239 scopus 로고
    • Developmental modulation of protein binding to beta-globin gene regulatory sites within chicken erythrocyte nuclei
    • Jackson PD, Evans T, Nickol JM, Felsenfeld G (1989) Developmental modulation of protein binding to beta-globin gene regulatory sites within chicken erythrocyte nuclei. Genes Dev 3: 1860-1873.
    • (1989) Genes Dev , vol.3 , pp. 1860-1873
    • Jackson, P.D.1    Evans, T.2    Nickol, J.M.3    Felsenfeld, G.4
  • 25
    • 0025180837 scopus 로고
    • Properties of BGP1, a poly(dG)-binding protein from chicken erythrocytes
    • Clark SP, Lewis CD, Felsenfeld G (1990) Properties of BGP1, a poly(dG)-binding protein from chicken erythrocytes. Nucleic Acids Res 18: 5119-5126.
    • (1990) Nucleic Acids Res , vol.18 , pp. 5119-5126
    • Clark, S.P.1    Lewis, C.D.2    Felsenfeld, G.3
  • 26
    • 39149121436 scopus 로고    scopus 로고
    • Cohesin mediates transcriptional insulation by CCCTC-binding factor
    • Wendt KS, Yoshida K, Itoh T, Bando M, Koch B, et al. (2008) Cohesin mediates transcriptional insulation by CCCTC-binding factor. Nature 451: 796-801.
    • (2008) Nature , vol.451 , pp. 796-801
    • Wendt, K.S.1    Yoshida, K.2    Itoh, T.3    Bando, M.4    Koch, B.5
  • 27
    • 48749112915 scopus 로고    scopus 로고
    • Vezf1 regulates genomic DNA methylation through its effects on expression of DNA methyltransferase Dnmt3b
    • Gowher H, Stuhlmann H, Felsenfeld G (2008) Vezf1 regulates genomic DNA methylation through its effects on expression of DNA methyltransferase Dnmt3b. Genes Dev 22: 2075-2084.
    • (2008) Genes Dev , vol.22 , pp. 2075-2084
    • Gowher, H.1    Stuhlmann, H.2    Felsenfeld, G.3
  • 28
    • 0028104109 scopus 로고
    • Sp1 elements protect a CpG island from de novo methylation
    • Brandeis M, Frank D, Keshet I, Siegfried Z, Mendelsohn M, et al. (1994) Sp1 elements protect a CpG island from de novo methylation. Nature 371: 435-438.
    • (1994) Nature , vol.371 , pp. 435-438
    • Brandeis, M.1    Frank, D.2    Keshet, I.3    Siegfried, Z.4    Mendelsohn, M.5
  • 29
    • 0027960055 scopus 로고
    • Sp1 sites in the mouse aprt gene promoter are required to prevent methylation of the CpG island
    • Macleod D, Charlton J, Mullins J, Bird AP (1994) Sp1 sites in the mouse aprt gene promoter are required to prevent methylation of the CpG island. Genes Dev 8: 2282-2292.
    • (1994) Genes Dev , vol.8 , pp. 2282-2292
    • Macleod, D.1    Charlton, J.2    Mullins, J.3    Bird, A.P.4
  • 30
    • 0030853287 scopus 로고    scopus 로고
    • Transcription factor Sp1 is essential for early embryonic development but dispensable for cell growth and differentiation
    • Marin M, Karis A, Visser P, Grosveld F, Philipsen S (1997) Transcription factor Sp1 is essential for early embryonic development but dispensable for cell growth and differentiation. Cell 89: 619-628.
    • (1997) Cell , vol.89 , pp. 619-628
    • Marin, M.1    Karis, A.2    Visser, P.3    Grosveld, F.4    Philipsen, S.5
  • 31
    • 33748805480 scopus 로고    scopus 로고
    • Spreading of silent chromatin: Inaction at a distance
    • Talbert PB, Henikoff S (2006) Spreading of silent chromatin: inaction at a distance. Nat Rev Genet 7: 793-803.
    • (2006) Nat Rev Genet , vol.7 , pp. 793-803
    • Talbert, P.B.1    Henikoff, S.2
  • 32
    • 10344260184 scopus 로고    scopus 로고
    • CpG island methylator phenotype in cancer
    • Issa JP (2004) CpG island methylator phenotype in cancer. Nat Rev Cancer 4: 988-993.
    • (2004) Nat Rev Cancer , vol.4 , pp. 988-993
    • Issa, J.P.1
  • 33
    • 0037068351 scopus 로고    scopus 로고
    • Gene silencing in mammalian cells and the spread of DNA methylation
    • Turker MS (2002) Gene silencing in mammalian cells and the spread of DNA methylation. Oncogene 21: 5388-5393.
    • (2002) Oncogene , vol.21 , pp. 5388-5393
    • Turker, M.S.1
  • 34
    • 23944435995 scopus 로고    scopus 로고
    • Methylation of histone H4 by arginine methyltransferase PRMT1 is essential in vivo for many subsequent histone modifications
    • Huang S, Litt M, Felsenfeld G (2005) Methylation of histone H4 by arginine methyltransferase PRMT1 is essential in vivo for many subsequent histone modifications. Genes Dev 19: 1885-1893.
    • (2005) Genes Dev , vol.19 , pp. 1885-1893
    • Huang, S.1    Litt, M.2    Felsenfeld, G.3
  • 35
    • 0033565868 scopus 로고    scopus 로고
    • An insulator element and condensed chromatin region separate the chicken beta-globin locus from an independently regulated erythroid-specific folate receptor gene
    • Prioleau MN, Nony P, Simpson M, Felsenfeld G (1999) An insulator element and condensed chromatin region separate the chicken beta-globin locus from an independently regulated erythroid-specific folate receptor gene. Embo J 18: 4035-4048.
    • (1999) Embo J , vol.18 , pp. 4035-4048
    • Prioleau, M.N.1    Nony, P.2    Simpson, M.3    Felsenfeld, G.4
  • 36
    • 0038302923 scopus 로고    scopus 로고
    • Replication of the chicken beta-globin locus: Early-firing origins at the 5′ HS4 insulator and the rho- and betaA-globin genes show opposite epigenetic modifications
    • Prioleau MN, Gendron MC, Hyrien O (2003) Replication of the chicken beta-globin locus: early-firing origins at the 5′ HS4 insulator and the rho- and betaA-globin genes show opposite epigenetic modifications. Mol Cell Biol 23: 3536-3549.
    • (2003) Mol Cell Biol , vol.23 , pp. 3536-3549
    • Prioleau, M.N.1    Gendron, M.C.2    Hyrien, O.3
  • 37
    • 0036340292 scopus 로고    scopus 로고
    • The chicken beta-globin insulator element conveys chromatin boundary activity but not imprinting at the mouse Igf2/H19 domain
    • Szabo PE, Tang SH, Reed MR, Silva FJ, Tsark WM, et al. (2002) The chicken beta-globin insulator element conveys chromatin boundary activity but not imprinting at the mouse Igf2/H19 domain. Development 129: 897-904.
    • (2002) Development , vol.129 , pp. 897-904
    • Szabo, P.E.1    Tang, S.H.2    Reed, M.R.3    Silva, F.J.4    Tsark, W.M.5
  • 38
    • 0035098525 scopus 로고    scopus 로고
    • Chromosomal DNA demethylation specified by protein binding
    • Lin IG, Hsieh CL (2001) Chromosomal DNA demethylation specified by protein binding. EMBO Rep 2: 108-112.
    • (2001) EMBO Rep , vol.2 , pp. 108-112
    • Lin, I.G.1    Hsieh, C.L.2
  • 39
    • 0027141519 scopus 로고
    • Number of CpG islands and genes in human and mouse
    • Antequera F, Bird A (1993) Number of CpG islands and genes in human and mouse. Proc Natl Acad Sci U S A 90: 11995-11999.
    • (1993) Proc Natl Acad Sci U S A , vol.90 , pp. 11995-11999
    • Antequera, F.1    Bird, A.2
  • 40
    • 50649108994 scopus 로고    scopus 로고
    • An integrated resource for genome-wide identification and analysis of human tissue-specific differentially methylated regions (tDMRs)
    • Rakyan VK, Down TA, Thorne NP, Flicek P, Kulesha E, et al. (2008) An integrated resource for genome-wide identification and analysis of human tissue-specific differentially methylated regions (tDMRs). Genome Res 18: 1518-1529.
    • (2008) Genome Res , vol.18 , pp. 1518-1529
    • Rakyan, V.K.1    Down, T.A.2    Thorne, N.P.3    Flicek, P.4    Kulesha, E.5
  • 41
    • 66149147557 scopus 로고    scopus 로고
    • Developmental programming of CpG island methylation profiles in the human genome
    • Straussman R, Nejman D, Roberts D, Steinfeld I, Blum B, et al. (2009) Developmental programming of CpG island methylation profiles in the human genome. Nat Struct Mol Biol 16: 564-571.
    • (2009) Nat Struct Mol Biol , vol.16 , pp. 564-571
    • Straussman, R.1    Nejman, D.2    Roberts, D.3    Steinfeld, I.4    Blum, B.5
  • 42
    • 43749098985 scopus 로고    scopus 로고
    • DNA methylation landscapes: Provocative insights from epigenomics
    • Suzuki MM, Bird A (2008) DNA methylation landscapes: provocative insights from epigenomics. Nat Rev Genet 9: 465-476.
    • (2008) Nat Rev Genet , vol.9 , pp. 465-476
    • Suzuki, M.M.1    Bird, A.2
  • 43
    • 33847065486 scopus 로고    scopus 로고
    • The epigenomics of cancer
    • Jones PA, Baylin SB (2007) The epigenomics of cancer. Cell 128: 683-692.
    • (2007) Cell , vol.128 , pp. 683-692
    • Jones, P.A.1    Baylin, S.B.2
  • 45
    • 1342346506 scopus 로고    scopus 로고
    • Barrier proteins remodel and modify chromatin to restrict silenced domains
    • Oki M, Valenzuela L, Chiba T, Ito T, Kamakaka RT (2004) Barrier proteins remodel and modify chromatin to restrict silenced domains. Mol Cell Biol 24: 1956-1967.
    • (2004) Mol Cell Biol , vol.24 , pp. 1956-1967
    • Oki, M.1    Valenzuela, L.2    Chiba, T.3    Ito, T.4    Kamakaka, R.T.5
  • 46
    • 0038243168 scopus 로고    scopus 로고
    • The role of DNA methylation in setting up chromatin structure during development
    • Hashimshony T, Zhang J, Keshet I, Bustin M, Cedar H (2003) The role of DNA methylation in setting up chromatin structure during development. Nat Genet 34: 187-192.
    • (2003) Nat Genet , vol.34 , pp. 187-192
    • Hashimshony, T.1    Zhang, J.2    Keshet, I.3    Bustin, M.4    Cedar, H.5
  • 47
    • 0037372003 scopus 로고    scopus 로고
    • Epigenetic regulation of gene expression: How the genome integrates intrinsic and environmental signals
    • Jaenisch R, Bird A (2003) Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals. Nat Genet 33 Suppl: 245-254.
    • (2003) Nat Genet , vol.33 , Issue.SUPPL. , pp. 245-254
    • Jaenisch, R.1    Bird, A.2


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