메뉴 건너뛰기




Volumn 60, Issue 2, 2010, Pages 387-392

Nocardioides panacisoli sp. nov., isolated from the soil of a ginseng field

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; DIAMINOPIMELIC ACID; FATTY ACID; GENOMIC DNA; MENAQUINONE; PHOSPHATIDYLGLYCEROL; PHOSPHATIDYLINOSITOL; RNA 16S;

EID: 76549087315     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.012690-0     Document Type: Article
Times cited : (17)

References (39)
  • 1
    • 34848858623 scopus 로고    scopus 로고
    • Nocardioides panacihumi sp. nov., isolated from soil of ginseng field
    • An, D.-S., Im, W.-T., Lee, S.-T. & Yoon, M.-H. (2007). Nocardioides panacihumi sp. nov., isolated from soil of ginseng field. Int J Syst Evol Microbiol 57, 2143-2146.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 2143-2146
    • An, D.-S.1    Im, W.-T.2    Lee, S.-T.3    Yoon, M.-H.4
  • 3
    • 0000719073 scopus 로고
    • Alkaline solutions for pH control
    • Bates, R. G. & Bower, V. E. (1956). Alkaline solutions for pH control. Anal Chem 28, 1322-1324.
    • (1956) Anal Chem , vol.28 , pp. 1322-1324
    • Bates, R.G.1    Bower, V.E.2
  • 4
    • 0020407158 scopus 로고
    • Nonstaining (KOH) method for determination of Gramreactions of marine bacteria
    • Buck, J. D. (1982). Nonstaining (KOH) method for determination of Gramreactions of marine bacteria. Appl Environ Microbiol 44, 992-993.
    • (1982) Appl Environ Microbiol , vol.44 , pp. 992-993
    • Buck, J.D.1
  • 5
    • 54749109122 scopus 로고    scopus 로고
    • Nocardioides fonticola sp. nov., a novel actinomycete isolated from spring water
    • Chou, J.-H., Cho, N.-T., Arun, A. B., Young, C.-C. & Chen, W.-M. (2008). Nocardioides fonticola sp. nov., a novel actinomycete isolated from spring water. Int J Syst Evol Microbiol 58, 1864-1868.
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 1864-1868
    • Chou, J.-H.1    Cho, N.-T.2    Arun, A.B.3    Young, C.-C.4    Chen, W.-M.5
  • 6
    • 35648991375 scopus 로고    scopus 로고
    • EzTaxon: A web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences
    • Chun, J., Lee, J.-H., Jung, Y., Kim, M., Kim, S., Kim, B. K. & Lim, Y.-W. (2007). EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 57, 2259-2261.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 2259-2261
    • Chun, J.1    Lee, J.-H.2    Jung, Y.3    Kim, M.4    Kim, S.5    Kim, B.K.6    Lim, Y.-W.7
  • 7
    • 55849086528 scopus 로고    scopus 로고
    • Nocardioides koreensis sp. nov., Nocardioides bigeumensis sp. nov. and Nocardioides agariphilus sp. nov., isolated from soil from Bigeum Island, Korea
    • Dastager, S. G., Lee, J.-C., Ju, Y.-J., Park, D.-J. & Kim, C.-J. (2008). Nocardioides koreensis sp. nov., Nocardioides bigeumensis sp. nov. and Nocardioides agariphilus sp. nov., isolated from soil from Bigeum Island, Korea. Int J Syst Evol Microbiol 58, 2292-2296.
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 2292-2296
    • Dastager, S.G.1    Lee, J.-C.2    Ju, Y.-J.3    Park, D.-J.4    Kim, C.-J.5
  • 8
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 9
    • 76549088943 scopus 로고    scopus 로고
    • Felsenstein, J, 2004, PHYLIP phylogeny inference package, version 3.6. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, USA
    • Felsenstein, J. (2004). PHYLIP (phylogeny inference package), version 3.6. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, USA.
  • 10
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: Minimum change for a specific tree topology
    • Fitch, W. M. (1971). Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20, 406-416.
    • (1971) Syst Zool , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 11
    • 77956986901 scopus 로고
    • Preparation of buffers for use in enzyme studies
    • Gomori, G. (1955). Preparation of buffers for use in enzyme studies. Methods Enzymol 1, 138-146.
    • (1955) Methods Enzymol , vol.1 , pp. 138-146
    • Gomori, G.1
  • 12
    • 76549083056 scopus 로고    scopus 로고
    • Hall, T. A. (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41, 95-98.
    • Hall, T. A. (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41, 95-98.
  • 13
    • 0030435636 scopus 로고    scopus 로고
    • Comparative lipoquinone analysis of influent sewage and activated sludge by high-performance liquid chromatography and photodiode array detection
    • Hiraishi, A., Ueda, Y., Ishihara, J. & Mori, T. (1996). Comparative lipoquinone analysis of influent sewage and activated sludge by high-performance liquid chromatography and photodiode array detection. J Gen Appl Microbiol 42, 457-469.
    • (1996) J Gen Appl Microbiol , vol.42 , pp. 457-469
    • Hiraishi, A.1    Ueda, Y.2    Ishihara, J.3    Mori, T.4
  • 15
    • 19344364985 scopus 로고    scopus 로고
    • Sphingopyxis granuli sp. nov., a β-glucosidase producing bacterium in the family Sphingomonadaceae in α-4 subclass of the Proteobacteria
    • Kim, M. K., Im, W.-T., Ohta, H., Lee, M. & Lee, S.-T. (2005). Sphingopyxis granuli sp. nov., a β-glucosidase producing bacterium in the family Sphingomonadaceae in α-4 subclass of the Proteobacteria. J Microbiol 43, 152-157.
    • (2005) J Microbiol , vol.43 , pp. 152-157
    • Kim, M.K.1    Im, W.-T.2    Ohta, H.3    Lee, M.4    Lee, S.-T.5
  • 16
    • 53749085101 scopus 로고    scopus 로고
    • Nocardioides salarius sp. nov., isolated from seawater enriched with zooplankton
    • Kim, H. M., Choi, D. H., Hwang, C. Y. & Cho, B. C. (2008). Nocardioides salarius sp. nov., isolated from seawater enriched with zooplankton. Int J Syst Evol Microbiol 58, 2056-2064.
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 2056-2064
    • Kim, H.M.1    Choi, D.H.2    Hwang, C.Y.3    Cho, B.C.4
  • 18
    • 77956800518 scopus 로고
    • Lipid and cell-wall analysis in bacterial systematics
    • Komagata, K. & Suzuki, K. (1987). Lipid and cell-wall analysis in bacterial systematics. Methods Microbiol 19, 161-207.
    • (1987) Methods Microbiol , vol.19 , pp. 161-207
    • Komagata, K.1    Suzuki, K.2
  • 19
    • 14344252906 scopus 로고    scopus 로고
    • Nocardioides aromaticivorans sp. nov., a dibenzofuran-degrading bacterium isolated from dioxinpolluted environments
    • Kubota, M., Kawahara, K., Sekiya, K., Uchida, T., Hattori, Y., Futamata, H. & Hiraishi, A. (2005). Nocardioides aromaticivorans sp. nov., a dibenzofuran-degrading bacterium isolated from dioxinpolluted environments. Syst Appl Microbiol 28, 165-174.
    • (2005) Syst Appl Microbiol , vol.28 , pp. 165-174
    • Kubota, M.1    Kawahara, K.2    Sekiya, K.3    Uchida, T.4    Hattori, Y.5    Futamata, H.6    Hiraishi, A.7
  • 20
    • 34547781750 scopus 로고    scopus 로고
    • Kumar, S, Dudley, J, Nei, M. & Tamura, K, 2007, MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599
    • Kumar, S., Dudley, J., Nei, M. & Tamura, K. (2007). MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599.
  • 22
    • 0000198211 scopus 로고
    • Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography
    • Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.B.3
  • 23
    • 0017376921 scopus 로고
    • Polar lipid composition in the classification of Nocardia and related bacteria
    • Minnikin, D. E., Patel, P. V., Alshamaony, L. & Goodfellow, M. (1977). Polar lipid composition in the classification of Nocardia and related bacteria. Int J Syst Bacteriol 27, 104-117.
    • (1977) Int J Syst Bacteriol , vol.27 , pp. 104-117
    • Minnikin, D.E.1    Patel, P.V.2    Alshamaony, L.3    Goodfellow, M.4
  • 24
    • 0003174184 scopus 로고
    • Preparation and analysis of DNA
    • Edited by F. M. Ausubel, R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith & K. Struhl. New York: Wiley
    • Moore, D. D. & Dowhan, D. (1995). Preparation and analysis of DNA. In Current Protocols in Molecular Biology, pp. 2-11. Edited by F. M. Ausubel, R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith & K. Struhl. New York: Wiley.
    • (1995) Current Protocols in Molecular Biology , pp. 2-11
    • Moore, D.D.1    Dowhan, D.2
  • 25
    • 0017235134 scopus 로고
    • Nocardioides, a new genus of the order Actinomycetales
    • Prauser, H. (1976). Nocardioides, a new genus of the order Actinomycetales. Int J Syst Bacteriol 26, 58-65.
    • (1976) Int J Syst Bacteriol , vol.26 , pp. 58-65
    • Prauser, H.1
  • 26
    • 0021971186 scopus 로고
    • A new medium for the enumeration and subculture of bacteria from potable water
    • Reasoner, D. J. & Geldreich, E. E. (1985). A new medium for the enumeration and subculture of bacteria from potable water. Appl Environ Microbiol 49, 1-7.
    • (1985) Appl Environ Microbiol , vol.49 , pp. 1-7
    • Reasoner, D.J.1    Geldreich, E.E.2
  • 27
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 29
    • 22544465882 scopus 로고    scopus 로고
    • Nocardioides oleivorans sp. nov., a novel crude-oil-degrading bacterium
    • Schippers, A., Schumann, P. & Spröer, C. (2005). Nocardioides oleivorans sp. nov., a novel crude-oil-degrading bacterium. Int J Syst Evol Microbiol 55, 1501-1504.
    • (2005) Int J Syst Evol Microbiol , vol.55 , pp. 1501-1504
    • Schippers, A.1    Schumann, P.2    Spröer, C.3
  • 30
    • 0020509401 scopus 로고
    • Pimelobacter gen. nov., a new genus of coryneform bacteria with LL-diaminopimelic acid in the cell wall
    • Suzuki, K.-I. & Komagata, K. (1983). Pimelobacter gen. nov., a new genus of coryneform bacteria with LL-diaminopimelic acid in the cell wall. J Gen Appl Microbiol 29, 59-72.
    • (1983) J Gen Appl Microbiol , vol.29 , pp. 59-72
    • Suzuki, K.-I.1    Komagata, K.2
  • 31
    • 1142273245 scopus 로고    scopus 로고
    • Development of a plate technique for screening of polysaccharide-degrading microorganisms by using a mixture of insoluble chromogenic substrates
    • Ten, L. N., Im, W.-T., Kim, M.-K., Kang, M. S. & Lee, S.-T. (2004). Development of a plate technique for screening of polysaccharide-degrading microorganisms by using a mixture of insoluble chromogenic substrates. J Microbiol Methods 56, 375-382.
    • (2004) J Microbiol Methods , vol.56 , pp. 375-382
    • Ten, L.N.1    Im, W.-T.2    Kim, M.-K.3    Kang, M.S.4    Lee, S.-T.5
  • 32
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 33
    • 0021350907 scopus 로고
    • Growth yield increase linked to caffeate reduction in Acetobacterium woodii
    • Tschech, A. & Pfennig, N. (1984). Growth yield increase linked to caffeate reduction in Acetobacterium woodii. Arch Microbiol 137, 163-167.
    • (1984) Arch Microbiol , vol.137 , pp. 163-167
    • Tschech, A.1    Pfennig, N.2
  • 35
    • 0001614970 scopus 로고
    • Gram-negative mesophilic sulfate reducing bacteria
    • 2nd edn, Edited by A. Balows, H. G. Trüper, M. Dworkin, W. Harder & K. H. Schleifer. New York: Springer-Verlag
    • Widdel, F. & Bak, F. (1992). Gram-negative mesophilic sulfate reducing bacteria. In The Prokaryotes, 2nd edn, vol. 4, pp. 3352-3378. Edited by A. Balows, H. G. Trüper, M. Dworkin, W. Harder & K. H. Schleifer. New York: Springer-Verlag.
    • (1992) The Prokaryotes , vol.4 , pp. 3352-3378
    • Widdel, F.1    Bak, F.2
  • 36
    • 34250150693 scopus 로고    scopus 로고
    • Widdel, F., Kohring, G.-W. & Mayer, F. (1983). Studies in dissimilatory sulfate-reducing bacteria that decompose fatty acids. III. Characterization of the filamentous gliding Desulfonema limicola gen. nov., sp. nov. and Desulfonema magnum sp. nov. Arch Microbiol 134, 286-294.
    • Widdel, F., Kohring, G.-W. & Mayer, F. (1983). Studies in dissimilatory sulfate-reducing bacteria that decompose fatty acids. III. Characterization of the filamentous gliding Desulfonema limicola gen. nov., sp. nov. and Desulfonema magnum sp. nov. Arch Microbiol 134, 286-294.
  • 37
    • 9744251544 scopus 로고    scopus 로고
    • Nocardioides aestuarii sp. nov., isolated from tidal flat sediment
    • Yi, H. & Chun, J. (2004). Nocardioides aestuarii sp. nov., isolated from tidal flat sediment. Int J Syst Evol Microbiol 54, 2151-2154.
    • (2004) Int J Syst Evol Microbiol , vol.54 , pp. 2151-2154
    • Yi, H.1    Chun, J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.